Oncorhynchus mykiss (rainbow trout): 110510010
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Entry
110510010 CDS
T07259
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110510010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110510010
03036 Chromosome and associated proteins [BR:
omy03036
]
110510010
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110510010
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110510010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
110510010
NCBI-ProteinID:
XP_021446945
Ensembl:
ENSOMYG00000045079
UniProt:
A0A8C7US02
LinkDB
All DBs
Position
Y:complement(30302062..30312873)
Genome browser
AA seq
416 aa
AA seq
DB search
MAAVVENVVKLLGEQCYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRGPGVAPGQLYTYPSRRWRKKRRAFPPEDPRLVFPPLKSELDLGFKKDALSSSDGSSLE
ALLKGEPLDKRGPPEFHGPEEESRLADYTCGGVTPAARVRKRVLEPDDFLDDLEDEDYEE
DTPKRRGKGKGKGRGVSSAKKKLEAAAAALEDKDKPYSCDNTFRQKHISQPSGRVCGKRY
KNRPGLSYHYAHSHLAEEEGGDKEEPEVHTPTPPQPEEPKTPKKGPDGLAIPNNYCDFCL
GDSALNQKTGQSEGLQSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSE
NDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLDLLKDKASIYRTPNAPPL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttgttgaaaatgttgtaaaactgctgggagagcagtgctacagagatgcc
atggagcagtgccataactacaacgcccggctatgtgccgagaggagtgtccgaatgccc
ttcctggactctcagactggagtggcgcagagcaactgttacatttggatggagaagaga
cacaggggaccaggagtggccccaggacagctgtacacctacccatcccgcaggtggagg
aagaaacgacgagccttccccccagaggatccccggctggtcttcccccctctaaagtca
gaactggacttgggttttaagaaggatgccctgtcatcatctgatggcagcagtctggaa
gccctgctgaagggggaacccctggacaaacggggtcctccggagttccatgggccagaa
gaggagtcccgtctggcagactacacttgtgggggggtcacccctgcagcacgcgtcaga
aagagagtcctggagccagatgacttcctggatgacttggaggatgaggactatgaggag
gacacccccaaaagaagaggcaaaggaaagggaaagggtcgtggtgtgagcagtgccaag
aagaagctggaggctgcggcggctgcactggaggacaaggacaagccttactcctgtgac
aacactttcagacaaaagcatatttcacaaccttctggacgagtctgtgggaagcgttac
aagaaccgtccgggtctgagctaccactacgcccactcccacctggctgaggaggaggga
ggggacaaggaggagcctgaggtccacacccccaccccgccccagcctgaggagcccaag
acacccaagaaaggtccagacggtttggcgatacccaataactactgtgacttctgcctc
ggggactcagccctcaaccagaagacgggccagtcagaggggctgcagtcctgctcagac
tgtggacgttcaggccacccgtcctgcctgcagttcacccctgtgatgatggctgcagtg
aagacctaccgctggcagtgcatcgagtgcaagtgctgcaacatctgtggcacctcagag
aacgacgaccagcttctcttctgtgatgactgcgatagaggctatcacatgtactgtctc
agcccccctatggctgaacctccagaagggagctggagctgccatctgtgtctggacctg
ttgaaagacaaggcgtccatataccggacacctaatgcccctccgttgtga
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