Oncorhynchus mykiss (rainbow trout): 110510148
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Entry
110510148 CDS
T07259
Symbol
hif1al2
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like 2 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
omy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110510148 (hif1al2)
04137 Mitophagy - animal
110510148 (hif1al2)
04148 Efferocytosis
110510148 (hif1al2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110510148 (hif1al2)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110510148 (hif1al2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
HIF-1
PAS_4
PAS_9
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
110510148
NCBI-ProteinID:
XP_021447173
Ensembl:
ENSOMYG00000042767
UniProt:
A0A8C7UBB4
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All DBs
Position
Y:complement(34546781..34565141)
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AA seq
724 aa
AA seq
DB search
MFPHLGNSLEDACDQKLHKTKRQKDRINGQKRSRVSTERLRAQSRVAAKSRRERERRLFG
ELAAWLPLPSGLTGHIDKASIVRLTLDYLRLRALLDHRDNVTPETRVCSDTVHFTMHGRY
PMAGIFSVETVLESAVGGFMLLVSQNGQVIFTTGDIRTHTGINQMDLIGRSLFDFMHHCD
QREVRDILSKMIATERQQQCDFLLRVKSTLTSQGRAVNQRHTRWKVIHCVGVKKQSHLPE
SACLVLMCRPLPISQCIIRDASLNHKTFLSGHHPDMRFTYCHSGVKELTGYTETELLGQS
VYQYYHTSDCQHIHKAHQSLLSKGQATMGRYRLLLKGGGYVWAETDASVVYNNQTGQPQS
VVCINYILSEVELPEMVFSLQQTEPLLRPCYSDLVGPILQNETYPAAETAVHLRNTKIPT
PEHNNEIQTYEGYSELNREDQMNMNSLSELCELDLDSLAPYIPMDGEDFLLTPVLDGILA
MIEGPVLPPGLEGHCSLGKSPISAGSFTTHQMKTLQIEPPCDSGASHTVKESEFGDHMKS
VYRGGSAVFKEGPDYAGLEGLVPNEQWSEKHKSCRHPQALMAAAVRLPYRTVEYFPIHPQ
DGSTCLCGSPSRQVLWKYTQQPKIPSTGPQPPTNHIDEMSTCHVPFSLPVLSKLDCEVTL
GPTSCLLQGSEITSVLDQAPSRFLHMTTWGINQLSTQYAHPCYAPRSAIEVSSGTSTSYA
EWIT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcatttaggaaattctctggaagatgcttgtgatcaaaagctccacaaaaca
aagagacagaaggacagaattaatggacagaagagaagcagggtgagtacggagcggctg
cgggcccagtcccgtgttgcagctaagagtaggagggagagagagagacgtttgtttggg
gagctggcagcatggctacctctgccctctggtctgactggccacatagacaaggcttct
atcgtcagactcacactggactacctgcgtctgagagcgctgctagaccatcgagacaat
gtcacaccagagaccagggtctgctctgacacagtccacttcaccatgcacgggcgatac
ccaatggcagggattttctctgtggagacagtgctggagtctgctgttgggggtttcatg
ctcttggtgtctcagaacggccaagttatcttcactacaggggacataaggacacacact
ggcatcaaccagatggatctgattggtaggagtctgtttgacttcatgcaccactgtgac
cagagggaagtcagagatatcctctcaaaaatgatagctactgagagacaacagcagtgt
gacttcctcctccgtgtgaagagcactctgacctctcagggtcgagctgtcaatcaaaga
cacacacgatggaaggtgattcactgcgttggggttaagaaacaatctcaccttccagag
tcagcctgtcttgtcctaatgtgccgacccttacccatctcacaatgcatcatcagggat
gccagcttgaatcacaagaccttcctgagcggacatcacccggacatgaggttcacctac
tgccattcaggtgtcaaggagctgactggatatacagaaacagaacttctgggccagtct
gtgtatcagtattaccacacatctgactgccagcacattcacaaagcacaccagagcttg
ctctctaagggacaggctaccatgggcaggtaccgtctgctgctgaaaggtggtgggtat
gtgtgggcagagacggatgcatcggtggtgtacaacaaccagactgggcagccccagagt
gttgtctgcatcaactacattctaagtgaggtggagctaccagagatggtgttctcactg
cagcaaacagaacctctactgaggccctgttactctgatcttgtggggcccatcctgcag
aatgagacctatcctgcagcagagacagctgttcatctacgcaacacaaaaataccaact
ccagaacacaacaatgagatccaaacctatgagggatattcagagctcaaccgagaggat
caaatgaacatgaactcactctctgaactatgtgagctggacctggactcgttggctcca
tacatacccatggatggagaagacttcctcctcactccagttttagatgggatcttggcc
atgatagaaggtcctgttcttccacctggtttggaaggccattgttccttggggaagtcc
cctatatctgctggttctttcaccacacatcaaatgaaaaccttgcagatagagccccct
tgtgactcaggggcgtcacatacagtcaaagagtcagagttcggggaccatatgaagtca
gtctatagaggaggcagtgctgtgttcaaggagggccctgactatgccggattggagggc
cttgtcccgaacgaacagtggagtgagaaacacaagtcctgtagacatccacaggcactt
atggctgctgctgttaggctgccttaccggaccgtggaatatttccccattcacccacaa
gatggatccacttgcttgtgtggatcaccatcaaggcaagtgttgtggaaatacacacag
cagcccaaaatcccaagcacaggccctcagccacctaccaatcatatagacgagatgtca
acatgccatgttcctttcagcctgccagtactgagcaagctggactgtgaggtcacactg
gggccaaccagctgcctgcttcaggggtcagagatcacctccgtcctggaccaggccccc
tccagattcttacacatgacaacatggggcataaatcagctctccacccaatatgcccat
ccttgttacgcacccagatcagctattgaagtcagctctggcacatcgacatcatatgct
gaatggataacatga
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