KEGG   Oncorhynchus mykiss (rainbow trout): 110510259
Entry
110510259         CDS       T07259                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110510259 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110510259 (exosc8)
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110510259 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 110510259
NCBI-ProteinID: XP_036823897
Ensembl: ENSOMYG00000028452
UniProt: A0A8C7VZ34
LinkDB
Position
Y:40812866..40828393
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELTSPAVDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVVQ
KEDLCIVKGKLCWVLYCDIMCLDYDGNLLDACLIALLAALKNARLPEVTVNKETEVPEVT
LENRRGLNIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLQDCISRATTRHREVRKLIDKVTQSDKTPK
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggattcaaaactgctgagcccttggaatatcaccggagttttctgaaagag
aactgccgtcctgatggaagggagctgggtgaattcagaaccactacattgaatataggt
tctatatccacagcagatggctcagccctggtgaagattggaaacaccacagtcatgtgt
ggcatcaaaggggaactgacaagcccagcagtggatgcacctaataaaggctacattgta
cccaatgtagacctgcctcctctgtgttcgtctcggttccgtcctggacctccaggagaa
caggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtcgtccag
aaagaggacttatgcattgtgaaaggaaagctgtgttgggtcctgtactgcgacatcatg
tgtctggactatgacggcaacttgttggacgcctgtctcatcgccctgctggctgctctc
aagaacgcacgtctcccagaggtgacagtcaacaaagagaccgaggttcctgaggtgacc
ctggagaacaggagaggtctgaacatccacaaacaccctgtaggggcctctttcattgtg
tttgatgactctataatgattgtcgaccccaccgctgaggaagagagcctgtctacggcc
actatcacagtggtaacggacgaggaagagcgactctgtgccctccacaagccaggtggt
acgtcattatcaggtgagaagcttcaggattgtatcagccgagccacgacgagacacagg
gaggtccgcaaactcatcgacaaagtcacacagagcgacaagacaccgaaataa

DBGET integrated database retrieval system