Oncorhynchus mykiss (rainbow trout): 110510266 Help Entry 110510266         CDS       T07259                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:omy04515]     110510266 (dchs1b) Cell adhesion molecules [BR:omy04515]  Cadherins   Cadherin related    110510266 (dchs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Fibulin_C Cadherin_pro TMEM154 CADH_Y-type_LIR LapA_dom Motif Other DBs NCBI-GeneID:  110510266 NCBI-ProteinID:  XP_036823871 LinkDB All DBs Position Y:complement(42257886..42499779) Genome browser AA seq 3313 aa AA seqDB search MTITCEGGPRASSLCVCSSLWRPRSLLLLYTVLELVVVHSTPVLGALELQLDEEQPAGTI VGDISAGLPPGITASLYFISDHEGTGVGSDLNIDETSGIITTARRLDREQRDHYSFIAVT MTGVTVEVSVTVNDINDHAPAFLKPKALLKIPEQTAVGTRVSLEPASDADRDQLTTQGYV IKEGNVGQAFRLETKRAANKVLYLDLVVNGVLDREKRSSYSLVLEAFDGGSPRRTGLMTL EVFVTDINDHAPVFNQSRYHAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQSDP DRYFVMDTRSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPT MTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNII YLICVDQVLDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQAYKQTI PEVVYPGSFVLQVTARDKDQGPNGDIRYSLLKDKKSHSDWFSIDPVTGIITTAMALDYES EPAPSVTVVATDNGRPPMSSTARVAVVLQDVNDNEPVFSSNFYNVTIKENTAVGTCFLEV TATDADRGSFGAISYSLGSSSSSMVPAQFTVNKETGQLCSSATLDREQGSGNYDLIVTAT DGGGQNAVTRVRVYLEDVNDNRPSFYPVLYTVSLSTQSAPGTSVTKVTANDPDAGDNGRV TYRTVPGGGSTFFTLNKDTGVISLARSLHGKANTLVSMVISAQDGGGLTAPLNARVNVSV VGGSVALPLFEQAQYYFTVSEEVLRGTEVGKVHAAIKTGRSQDISYSISSGDPDGYFTMD STSGALRSSVPLDHEACPSLDLEVLARYGSPPAYGTTRVRITISDVNDNAPSFLPSSSES LLLPEVTKMGTVVYRVQATDRDSGPNGQLSFDLVSIGTGGSSGQRMFGVDRGSGELKLIG GLNYESVPRYDLQVVAKDGGAPQLSSTFTLVVHVQAQDAQGPAFDTLTYRVELQENTPLN TRVLQVRALNREAAGNGGGSSSSSVSYRLHPDGDAAGFGVAPDSGWLFVRSSLDREAKDI YLLTVVATSGPGGQGAAGAGRTGSATVRVSVTDENDNSPRLSQERVFLAVRENLPAGTGF GRVSATDRDAGLNARLTFRLLHTDRHFQINSHTGEISTRLSLDREQQSSYQLVVVVQDGG TPPRSATGTAHITLLDENDNAPVFNHAHPDRELLIQVMEESQPGSVLGTITAKDPDEGEN GTLHYSLSGSRVECFTLNPTTGELRCSSSLRHGERAEYNLTVSASDHGTPPHTSTCPLRI QVLSSSKPSAKNTLSMTLNSVEGVAPGSVIGSVRSHDQRDTLSLDGQVTYVVVGGTDRKG TFMVDRITGDVYLVRVLDYEEGDRYTLHVEVSDFTLAYPSSHRVQLDINVQDSNDHAPQF TEDPVTIVIPENTQPGASIYTFQAADKDGSGPNSELRYSIQHRWPDSLHLLTLDPSTGVL TLGQKLDHETTSSLYLVVRATDQAEDVSARRWGSVTARVFVTDENDNAPVFSSSSAVSVM EDQPVGFVVVYVMARDEDEGENGRVSYSIQLGNGAGRFSLNPNTGSLSILKALDREDQEV FNLTIIAEDHGMPQLSTSQVLSVHVIDVNDEPPLFQWEELEAEVRENQEAGTTVITVTAS DRDQGSNGQVTYGGVTEEGFSINPVTGVISTTKTLDRETQDHYTLTVYARDGGLPPNFAK VVVRVLVQDENDNVPVFARPWYGLEVPESQSAVELCIVRAADADTGPAGDIEYRITAGDP DGIFQLHVSSGVLSTSRPLDRELRAGYNLEVVALDHGSPALSSTATVEVKVLDVNDNSPA FSSSSYTIDVSEDAAQGTTVLEVTATDADEGENGKVLYFLSQEARGAFTVDENTGCITTA SPVDREKRASYSFRVFAVDLSPAEPRNTSAQVTVTILDINDNAPFFIQDPLVVEVLASQS HRVLATMRAEDKDFGANGSVFYRFAGPVRGFSINSLTGEIQGTEGIDRLSQAQRTLMVEA MDQGTPAQSSLGVVVVYVKEQVYTGIRFSRNARDVSIQENAAKGTAVAQDQAQYPDGTRR GISYSLFSGNRLQAFSIGTSTGEIWVQRSLGLDFEDTPRLRLVVKAETASSSSFMAVNLI LQDINDNLPRFQLQNYVAYMREAQGYDMPIIQVVAEDVDQGQNGQVTYSIQSSGGMSGLF KIDPVTGSITTAAIMDREIWTQTRLVVTATDRGSPRLAGSATLTVIIVDLNDNSPTIPLP REVRIPENTLIGTEITLVTGNDVDSSPALSYSLQLDGSSQGKFGIHRYSGGVSLTAPLDY EDRTWYTLTVRATDSQHQTEANITILVEDVNDNAPAFTHDLYQVTLPEHSPPGSPVVTVT ATDRDSGENGKVTYRVMSSTRGGFYVDPSNGTLFIRERSEFDPENPSVSVVIEACDGGSP PLSSVTTVQVQLSDVNDNAPVFHQSEYRATVLEDSIAGATILTLEAMDADFSRDNCGFDF AIANGNTGNVFQIESSVRFLEGRGFQTVGTLLLAEVLDFEAVPLYNLTVVVSDRGVPQRS SSVAAVITVGDVNDNPPAFGRAEYAVSLSEGAGAGTEIIRLTATDPDSAPNAEVQYSISS GDEMDLFTIDQWTGALRLQRQLDREHQSSHVVIIQASDGHGHVALTPISVEVKDVNDNRP FFPIETLTASIRENQPVNSAVTILHAIDHDTGMYGQLRYYMVEQGQGSGVTGREAFTVDQ SSGEVRAKMTFDFENVNSFNFVALAMDAGNHSATVTVQVYVTGEDEYDPLFVSPEFSFEV PEGAKRGQSIGQVQANDEDGGVDGIVLFSLPSSSLYFDVNKTTGVVFLKMDGSSSRSSSS GLGGRSKRETRTMTLDVHAHSPLDTSRVTTAQLTIDVTNTSFGLGADLNVLLIIIIAVSL GVVVLLVVMAVVIFLLKSKRRRKNKGQDNSAVASGTTLQKLDDSKSGGSERIYHQTLPGY AGDQGGAGAGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASISSSMQEHISAR GPDSGIQQDADQLSDISCEPAALEGSTWFKGKKLGGSLSGTMLSGQLPVYRDELGGGYLG VGRGLNISHPKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVF TEIARLKDETAPQNQTNPRQPFQPKAKTDPKPRIDPPPLITAVAHPGAKSVPPKVPVIGR TFPHLATLRRSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSTSMISTRD PMLDHSPDHEMRI NT seq 9942 nt NT seq  +upstreamnt  +downstreamnt atgacaataacgtgtgaaggtgggcccagggccagcagtctgtgtgtgtgttcaagccta tggaggccacggtctctcctcctgctctacacggtcctggagctggttgtggtccactcc accccggtcctaggagctctggagctccagctggatgaggagcagccggcagggaccatc gtaggggacatcagtgctgggctaccccccggcatcaccgcctcgctgtacttcatctcc gaccacgaagggacaggtgtgggcagcgacctcaacatcgacgagacctccgggatcatc accacggcacgccgcctcgaccgcgagcagagggaccactacagcttcatcgccgtcacc atgaccggggtcacagtcgaggtgtccgtcacggtcaacgacatcaacgaccacgcgccg gcgttcctcaagccaaaggcattgctgaagatcccggagcagacggcggtgggaacacgg gtttccctggagccggcgtcagacgcggaccgcgatcagctgaccacccaaggatatgtg atcaaggaaggcaatgtggggcaagccttcaggctggagaccaaaagagctgctaacaag gtgttgtacctggacctggtggtgaacggtgttctggacagggagaagaggtcctcgtac agcctggttctggaggccttcgacggggggagtcccagacgcaccggcctgatgaccctg gaggtgtttgtcaccgacatcaatgaccacgcccccgtcttcaaccagagcagataccac gctatcatctcagagagtttaccacagggaagcaacatactgcaggtgtttgcgtccgac gctgacgagggagacaacggtctggtcctgtacgagatcaaccgtcgccagagcgaccct gaccgctacttcgtcatggatacgaggtcgggggtcatcactctgaaccgtccactggac tacgagctgaagagagtccacgagctggtggtacaggccagagacaacgccagccaccct gaggtgaccaatgccttcgtcaccatccacgtccgagactacaacgacaaccaacccacc atgaccattatcttcctcagcgaagacggctcgccgcgcatctcagagggcgcccagccc ggccagtacgtggcacgcatatcggtcaccgacccagactatggagaatacgctaatgtt aacgtttcgctagagggaggggacgggaagttcgccctgaccaccaaggacaatattatc tatctgatctgtgtggaccaggtgttggaccgcgaggagagggacacgtacgagctgcga gtcatggcaacagacgcaggcacccctcctctcagggctgagtcgtcctttactatccag gtcactgacgtgaatgataatccaccactcttcgaccagcaggcttacaaacagaccatc ccagaggtcgtctacccaggatcctttgtgctccaggtgacggcccgggacaaggaccag gggcccaatggggacatccgatacagcctcctcaaagacaaaaagagccactccgattgg ttctccatcgacccagtgacggggatcatcaccacggcgatggcactggattatgagtcg gagccagcgcccagcgtgacggtggttgccacggacaacgggcggcctccaatgtcgtcg acggcgagggttgccgtggtgctgcaggatgtaaacgataacgagccggtgttctctagt aacttctacaacgtcaccatcaaggagaatacggcagtcgggacctgcttcttagaggtg acagcaacagatgctgaccgtggttcgttcggagcgatatcgtactccctagggtctagt tctagcagcatggtaccggcccagtttactgtcaacaaggagactggtcagctgtgttcc agcgccacactggatcgagaacaggggtcaggcaactacgacctcatcgtgaccgctact gatgggggtggtcagaatgcagtgacccgtgtgcgtgtgtatctggaagacgttaatgac aaccgtccatccttctatccggtgctctacaccgtgagcctcagcacccagagcgccccc ggaacctccgtcaccaaggtgacggccaacgaccccgacgctggtgacaacggcagggtg acctatcgcacggtgccgggaggaggctccaccttcttcaccctcaacaaggacacaggt gtgatctctcttgcgcggtcgcttcacggtaaggccaacaccctggtctccatggtgatc tcggcgcaggatggcggtggtctgacggcgccgttgaacgcccgtgtcaacgtgagcgtg gtcgggggctctgtggcgctccctctgtttgaacaggctcagtactacttcactgtgtct gaggaggtcctcaggggcaccgaggtgggcaaggtccacgctgccatcaagaccggtcgt tcccaggacatctcctattccatctcatcaggtgacccagatggttatttcaccatggac tctacctccggggcgctccgttcctctgtccctctggaccacgaggcctgtcccagtctc gacctggaagtcctggctcgctacggctcgccgcccgcctacggaaccacacgcgtacgc atcaccatctcagacgtcaatgacaacgctccctccttccttccctcctcctccgaatcg ctccttctcccggaggtgactaaaatgggaacggtggtgtaccgggttcaggccactgac agggactcaggtccaaacggtcagctgagttttgacctggtctcgatcggcacggggggc agtagcggtcaaaggatgtttggtgtggaccggggaagcggggagctgaagctgattggt ggactgaactacgaaagtgttccgcgctacgacctacaggtggtagctaaagatggtgga gccccccagctcagctctaccttcacgttagttgtgcatgtccaggctcaggatgcgcag ggccccgctttcgacacgctaacgtaccgcgtggagctacaggagaacacgcctctaaac acacgcgtcctacaggtccgcgcccttaacagagaggctgctgggaacggcggtggctcc tcctcttcctcggtgtcgtacagactgcatccggacggtgacgcggcagggttcggggtc gccccagatagtgggtggttgttcgttcggagctctctggaccgggaggctaaggacata tatctactgacggtggtggcgacctctggaccgggagggcagggcgcggctggggcgggc aggactggcagtgccacggtgagggtctctgtgacagatgagaacgacaacagtccccgt ctgagtcaggagagggtgtttctggctgtgagagagaaccttccggcgggcacggggttc ggccgcgtgtcggctaccgacagagacgcaggactgaacgccagactgaccttcaggctc ctgcacactgaccgacacttccagatcaactcacacacaggtgagatcagtactaggtta tctctcgacagagagcagcagtctagctaccagctggtggttgtggtacaagacggaggc acgccccctcgcagcgctacgggtactgcccacatcactctattggatgagaacgacaac gcccctgtctttaaccacgcccaccccgacagggaactgctcatacaggtgatggaggaa tcccagcctggctcagtcttggggacaataacagctaaagatcctgatgagggcgagaac ggaacactccattactcactgtcaggttccagagtggagtgtttcacattgaaccccacc acaggagaactacgttgctcgtcctctctgagacacggtgagagggctgagtacaacctg acagtgtcagcttctgaccacggcacacctccacacacctctacctgtcccctacgcatt caggtcctgagttccagtaagccttctgccaagaacactctgtccatgactctcaactca gtggagggcgtcgccccaggctctgtcattggctctgtccggtcacatgaccagcgtgac acgctgtcgttggacggtcaggtgacgtacgtggtggtgggcgggacggaccggaagggg acgttcatggttgaccggattacgggagacgtgtacctggtcagagtactggactatgag gaaggggacaggtacactctgcatgtggaggtatcagatttcacgctggcgtaccccagc agtcacagagtacagctggacattaacgtccaagacagcaatgaccacgccccccagttc accgaggaccccgttaccatagtgataccagagaacacccagccgggagcctccatctac accttccaggctgctgataaggacggcagtggtcccaacagcgagctgcgttactcaatc cagcaccgctggcctgactcccttcacctcctgacccttgacccgtccactggggtcctg accttgggtcagaagttagatcacgagaccacgtcctccctctacctggttgtcagggcg accgaccaggcggaggacgtgtccgcgcggcgctgggggtcggtgacggcccgggtgttt gtgacggacgagaatgacaacgctcccgtgttcagctcgtcctccgccgtcagtgttatg gaggaccagccggtcgggttcgtggttgtgtacgtgatggctcgtgacgaggatgaggga gagaacggccgagtgtcctacagcatccaattagggaacggcgctggacgcttcagcctc aaccccaacaccggctctctgtccattctgaaggctctagatcgtgaggaccaggaagtg tttaatctgaccatcatagctgaggatcacgggatgccccagctgtccaccagtcaggtt ctgtctgtccacgtgattgacgtgaacgatgagccgccgctgttccagtgggaggagcta gaggcggaggtcagagagaaccaggaagcgggaaccacggtgatcaccgtcacggcatcg gacagagaccaaggttctaatggccaggtgacatatggaggtgtaacagaggaaggcttc agcatcaaccctgtgacaggagtcatcagcactaccaagaccctggacagagagactcag gaccactacacactcacagtgtatgccagggacgggggcctgcctcctaactttgccaag gtggtggtgcgtgtcttggtgcaggatgagaacgacaacgtgccggtgttcgccaggccc tggtacggcctagaggtccctgagagccagagcgccgtggagctgtgtattgtcagggct gctgacgcagacactggccccgctggagacatagagtacaggatcactgctggagaccca gacgggatcttccaactccatgtcagttcaggggtcctgtccacgtctcgtcccctggat cgagagctgcgggcagggtacaacctggaggtggtggccctggaccatggttctcctgct ctgagcagcacagccacagtggaggtgaaagtgttggatgtaaatgacaacagtccggcc ttcagcagcagcagctacaccatagacgtctcagaggacgctgcccagggaactacagtc ttagaggtgacggccacagacgcagatgagggggagaacgggaaggtgctgtatttcctg agtcaggaggctaggggcgctttcaccgttgacgaaaacactggctgtattacaacggcg tcgccggtggaccgagagaagagggcgtcgtacagcttccgtgtgttcgctgtggacctg tcacctgccgagcccagaaacacctcggctcaggtaaccgtgacgatcctggacataaac gacaacgctccattcttcatccaagaccccctcgttgttgaggtcttggccagccaatca catcgggtcctggccaccatgcgggccgaggacaaggactttggcgccaacggctctgtg ttctaccgttttgccggtccagtgaggggtttcagcatcaactccctaacaggggagatc caggggacagaggggatagacaggctgagtcaggcccagaggaccctcatggtggaggct atggaccagggaaccccggcccagtccagcctgggggtggtggtggtctatgtgaaggaa caggtgtatacaggcatcaggttctcaaggaacgccagagacgtcagcatacaggagaac gccgccaaaggtacggctgtagctcaggatcaggcccagtaccctgatggaacaagaaga gggatcagctatagtctcttctctggaaacagactgcaggccttcagcatcggcactagc acaggtgaaatctgggttcagaggtcgttgggtctggactttgaggacactccgcgactc cgcctggtagtgaaggctgagacggcttcgtccagctccttcatggccgtcaacctgatc ctgcaggacatcaatgacaacctgccacgcttccagctccagaactatgtagcctacatg agagaggcccagggttacgacatgccaatcatacaggtggtggcagaggacgtggaccag gggcagaacggtcaggtgacctactctatccaatcatcaggaggcatgagcggcctgttc aagatcgaccctgtcacgggaagcatcaccaccgccgccatcatggacagagagatctgg actcagaccaggctggtcgtcacagcgacggacaggggcagcccgcgattggccggttcg gccacactcacagtgatcatcgtagacctcaacgacaacagtccaacaatccctctgccc cgggaggtccgcattcctgagaacaccctgatcggcacagagatcaccttggtaacgggt aatgacgtggactccagcccggccctgtcctacagcctccagctggacgggtcgtcccag gggaagtttgggattcaccgctacagtggaggggtgtctctgaccgcccctctggactac gaggacaggacctggtacacactgaccgtcagggctactgactcccaacaccagactgag gctaatatcaccatattggtggaggacgtcaatgacaacgctcctgcgttcacacacgat ctataccaggttacactgccagaacattccccgccaggcagtcccgttgtcacggtgacg gcgactgatcgtgattcgggggagaatggaaaggtcacctacagagtgatgtcttcaacg cgaggtggcttctacgtagaccccagcaacgggaccctgttcatcagggagaggtcagag tttgatccagagaacccgtccgtcagtgtggtgatcgaagcctgtgacgggggatccccg cccctctcctccgtcaccacagtacaggtccagctatcagacgtcaacgacaacgctccc gtcttccaccaatcagagtacagggcgacggtgttggaggactccatcgccggggcgacc atcctgaccctggaggccatggacgctgatttctctcgggacaactgcggcttcgacttc gccattgccaatggcaacaccgggaacgtcttccagatcgagagcagcgtgcgcttcctg gaggggcggggcttccagaccgtagggacgctcctattggccgaggtgctggacttcgag gccgtgcccctctataacctgacggtggtggtgtcggacagaggggttccacagaggagt tctagcgttgccgcggtgataaccgttggcgatgtaaacgataacccgccggcgtttggc agggcggagtacgctgtgtcactgagtgaaggagctggcgccgggacagagataatacga ctcactgccacagacccagactctgcccccaacgcagaggtccagtacagtatcagctca ggcgatgagatggacctgttcaccatcgaccagtggaccggggcgctgcggttacagcga cagctcgaccgcgagcaccagtcctcccacgtggtcatcatccaggcctcggatggccac ggtcacgtcgccctgacaccgatcagcgtagaggtcaaagatgttaatgataacagaccg ttcttccccatcgagactctgacggctagcatcagagagaaccagccggtcaactcagcc gtgaccatactccacgccatagaccacgacactgggatgtacggccagctgagatactac atggtggagcaaggtcaagggtcaggagttacagggcgagaggccttcaccgtggaccag agttcaggagaggtcagggctaagatgacttttgactttgagaatgtcaactcatttaat tttgttgctctggcgatggacgccggtaaccactcggccacggtgacggtccaggtgtac gtgactggtgaggatgagtacgacccactcttcgtctccccagagttctcctttgaggtt ccagagggggcgaagaggggccagagcatcggacaggtccaggcaaacgacgaggacgga ggtgtagacggtatcgtcctcttctcgctcccaagctcctccctgtactttgacgtcaac aaaacaaccggggtggttttcctcaagatggacgggtcttctagtcgcagcagcagcagc gggttaggggggcggtccaaaagggagaccaggaccatgacactggacgttcacgcccac agtcctctggacacgtcccgggtcaccacggcccagctgaccatcgatgtgaccaacacg tccttcggcctgggggcagacctcaacgtcctgctgattatcatcatcgccgtgtccctg ggggtcgtcgtgctactggtggtcatggcggtggtcatcttcttgctcaagtcaaagaga cgcaggaagaataaaggacaggacaacagtgccgtggcctcgggaaccactctgcagaaa ctggacgattccaaatctggaggatctgagaggatctatcatcagacgttaccagggtac gccggtgaccaaggtggagcaggggcggggccctacccccgggggggttcccttgacccc tcccactccagcgggcgtggctcagccgaggcggcggaggacgatgagatcaggatgatc aacgagtacccccgcgtagcgtccatctcctcgtccatgcaggagcacatctcagcccgc gggccagactctggcatccagcaggacgctgaccagctgtcggacatctcctgtgagccg gccgccctggaaggaagcacctggttcaaaggcaagaagctgggagggagtctcagcggg accatgctgtctggacagctacctgtctacagagacgagctgggaggagggtacctgggg gtggggaggggactcaacatctcccatcctaaagattatgccttcccagaggacgggaag ccctctgtagacgggtccctgacagccatagtggccagtgacgaagagctaaggggcagt tataactgggactacctgctcaactggtgccctcagttccaaccactagccaacgtcttc acggagatcgccaggctcaaagacgagacagccccacagaaccagaccaacccacgccag cccttccagcccaaagccaagacggaccccaagcctcgcatcgacccaccgcccctcatc actgccgtggcccaccctggggccaagtccgtccccccgaaggtccctgtcatcggacgc accttcccccacctggccaccctacggcggtcccccatcagccacgagggctccatctcc tcagcagccatgtcccccagcttctccccctctctctcccccctcgccgcccgctctccc gccgtctcccccttcggagtaacccagggcccctcgacctccatgatcagtaccagggat cccatgctggaccacagccccgatcatgagatgaggatctga

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