Oncorhynchus mykiss (rainbow trout): 110510272
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Entry
110510272 CDS
T07259
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00562
Inositol phosphate metabolism
omy01100
Metabolic pathways
omy04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
110510272 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
110510272 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110510272 (synj1)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
110510272 (synj1)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
110510272 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
110510272
NCBI-ProteinID:
XP_036823124
LinkDB
All DBs
Position
Y:42618134..42718341
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AA seq
1755 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNRDECLMFESGAVAVLSAAEKEAIKNTYTKMMDAY
GILGVLRLNLGDSMLHSLVVAAGCSSVGKVQDSEVFRVTSTEFVSLKNDPSDEDRIADVR
KVLNSGNFYFAWSSSGISMDLSLNAHRRIKEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLD
DQVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGYEANAPAFERHFSALRRLYGKQVIIN
LLGMKEGEHMLSKAFQSHLKASEHAGAVKMINFDYHQMVKGGKADKLHSVLKPQLNKFLD
ACSFFCYSGEKGVTKSQSGTLRTNCLDCLDRTNSVQAYFALEMLPKQLEDMGLTEKPQLV
ARFQEVFRSMWTVNGDSVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPILQSASPRVLLGMCQNHQKYTRPKQIRV
SVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPMKAGLPDFQDSRANPPDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPHHAPYIRDVAV
DTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYNEITRKLTFPM
GRLLYSHDYIFWCGDFNYRISQPNEEVKELIRQQNWEALTAGDQLVDQKNQGLVFRGFIE
GNLDFAPTYKYDLFSDDYDTSEKCRTPAWTDRCLWKRRKWNFDKTAEEMNMVGPVGEAEE
QQQYPWSPGELKYYGRAELKTSDHRPVMAVMDIDVLEVDPDARHQVYKEVIALQGPPDGT
ILVSLCSSGPDDYFDDALIDELLDKFAVFGEVILIRFVEEKMWVTFLEGYSALAALSLSA
STVLGKVIDIRLKSSGWIKSLEEEMSVERICGSVPTSASSSLLAEDADMGEDDYDMEGDV
DEEVEDILPQHLQPGAGPGPLSSPSPSPRGSPSHSPTHGEPAAPSRPSRSAPRSAGPPQG
TPVDFQPGAPQALEPKRPPPPRPNAPPARPAPPQRPPPPSGGLSPMPGRRDMGGQKSPAL
ARPASGRVQSGPGGLPRPNMPQRAGVISVTPQARPAHPGAPRPTPEAPGAPRPTPDTHPG
APRPGPDAQPKPTDLPLGPPPSGPPPVRHVPSPMQPTMQPQSASPAQPPMQAPMQAQSAP
PAQPPMQPTMQAPMQAQSAPPAQPPMQAPMQPTMQPTMQPTMAAPMQPTMQAPMQPQSAP
PAQPPMQAPMQPQMAAPMLPTQAGAGLGATGAVAPQGLSSPKPPPRSRSSHVLPPETTTT
ENAPATQINGVNGIQREAQWKPEPFDTLTSDLSASWLNTQSLTRTSSLRSAPTLPTSSIT
LPSSLHSTPLSTLQGFDDDSSSTLPPSLTRSLLPPPPVPSRSRSQEALQRGSPNPFLSDP
VPARPNSTNPFTGPLVQQGQRRSLTPDFLAQQKASRPGLDRTMSAFTQPLAPTPAPFPAF
APNMTPGAPAPPPSLHRTMSLLGPSMTPLIPAPALPLLTAPSLPAPMLPLALPLSRPLLP
APALPLSPPSSTPDLPLSPPSSTPTPLSSRPQPPPPPRAQLWVTFDDDSVLPVPAKAPPA
APTASTSPPSLTQTQFSCSGFDSDPHWATGSTTLTSTFLSRPPPIPARVVPGSSQPPLPA
RATNNLPFPKDFTER
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggatatcgcatctaccacaagttggacccgcccccgtacagcgtc
atcgtggaaaccaggaacagagatgaatgcctcatgttcgagtcgggcgccgtcgccgtg
ctatcggctgcagagaaggaggccattaagaacacctacaccaagatgatggacgcctat
gggattctgggagttctacgcctcaacctgggtgattccatgctccacagcttggtagta
gcagcaggctgtagctccgtagggaaggtgcaagactctgaggtgttccgggtcacgtct
acagagtttgtttctctgaagaacgacccgagtgacgaggaccgcatcgctgacgtcagg
aaagtcctgaactctgggaatttttatttcgcttggtcctctagcggcatcagcatggac
ctcagcctcaacgctcaccgccggatcaaagaggacaccacagacaaccgcttcttctgg
aaccagtcccttcaccttcacctaaagcactacggtgtgaactgtgatgactggttgttg
aggttgatgtgcggcggcgtagagatcaggacgatctacgcaggtcacaaacaggccaag
gcctgcgtcatctcccgcctcagctcagagagggccgggacgcgcttcaacgtccgaggg
gccaacgatgacggacaggtggccaacttcgtagagactgaacaggtgatcttcctggat
gaccaggtgtcttccttcatccagatccgtggttccattcctctgttctgggagcaacca
ggaatacaggtgggctctcatcgcgtcaagctctccagagggtacgaggccaacgcaccg
gcttttgagaggcacttcagtgctctgaggaggctgtatgggaaacaggtgatcatcaac
ctgctaggcatgaaggagggagaacacatgctcagcaaagcattccagagtcacctgaag
gcgtccgaacacgccggagctgtgaagatgattaacttcgactaccatcagatggtgaag
ggcggcaaagctgacaaactccacagtgtcctcaaacctcagctcaacaagttcctggat
gcatgtagcttcttctgctactctggagagaagggggttaccaagtctcagagtggtacc
ctcaggaccaactgtctagactgtctagacagaaccaacagtgtccaggcctacttcgct
ttggagatgttacctaaacagctagaggacatgggtctgacagagaagccccagctggta
gccaggtttcaggaagtgttcaggtccatgtggacggttaacggagactctgtcagcaag
atctacgctgggactggagccctggatggaaaggctaaggggggtaagttgaaggacggt
gctcgctctgtgaccagaaccatccagaataacttctttgacagttcaaagcaggaggcc
attgacatcctccgactgggctcaacactgaacagtgacctggcagacaaggcccgggcc
ctactcaccacgtccagtctttacgtcactgagcctatcttacaatcagcctctcccaga
gttctactgggaatgtgtcagaaccaccagaaatacacccgtcccaaacagatcagggtg
tcagtgggtacgtggaacgtcaacgggggaaaacagttccgcagcatcgccttccgcaac
cagaccctcaacgattggctgctggacgctccgatgaaggccgggctcccagacttccag
gacagtagagccaacccaccagatatctttgccatcggctttgaggagatggtggagttg
aatgctggcaacatcgtcagtgccagtacgaccaatcagaagctgtgggctgcagagctg
cagaagaacatatcccgcgatcataaatacgtcctgctggcatcagagcagctagtggga
gtctgcctgtttgtcttcattcgccctcaccacgccccctacatcagggacgttgccgtg
gataccgtgaagacggggatgggcggagccacaggtaacaaagggggagtggccatccgc
atgctgttccatacgaccagtatctgtttcgtctgctcccacttcgctgccggccaatca
caggtcaaggagaggaacgacgactacaacgagatcacacgcaaactcaccttccccatg
ggtagactgctctactcccacgactacatcttctggtgcggggactttaactaccgcatc
agtcagcccaacgaggaagtgaaggagttaatcagacaacagaactgggaagccctgacc
gccggggaccagctggtggaccagaagaaccagggactggtgttccgtgggttcatcgag
ggcaatttggactttgctcccacctataagtacgacctgttctctgacgactatgacacc
agtgagaagtgtcgtacccccgcctggaccgaccgctgcctatggaagaggaggaagtgg
aacttcgacaagactgcggaggagatgaacatggtcggcccagtgggagaagcagaggaa
cagcagcagtacccctggagccctggggagctgaaatactacgggagggctgagctcaag
acctctgatcacaggcccgtgatggcagtgatggatatagatgttctggaggtggatcca
gatgcccgtcaccaggtgtataaggaggtgatcgccctgcagggtcctcccgacggaacc
atcctggtctccctctgttcctccggacctgacgactactttgacgacgcgctcatcgac
gagctgctggacaagttcgctgtgtttggagaggtcatcctcatcaggtttgtggaggag
aagatgtgggtgacgtttctagagggttattctgctctggctgccctgtctctgagcgcc
tccacggttctgggtaaggtgatagacatccgtctgaagagttcaggttggattaagagt
ctggaggaggagatgagtgtagagaggatctgtggatctgtccctacttccgccagctcc
tctctgctggccgaggacgctgatatgggagaggatgactacgatatggagggcgatgtg
gatgaggaggtggaggatattctcccccaacaccttcagcctggcgcaggccccgggccc
ctctcctccccctccccctccccacggggcagcccctctcactcccccacccacggagaa
ccagctgcccccagcagacccagtcgatctgccccacgctctgctggaccaccgcaaggg
actccagtggacttccagcctggtgctcctcaggccctggagcctaaacgcccccctcct
cctcgccccaacgccccgccagcccgacctgctcctcctcaacgccctcctcctccatca
ggaggcctaagccccatgcccgggagaagagacatgggaggacaaaaaagccctgcgctc
gctagacctgcctcaggtcgtgtccaatcaggtcctggaggcctgccccgaccgaacatg
cctcagagggctggggtgatcagtgtgaccccccaggcgcgccctgcccacccaggtgct
cccagacccaccccagaggcaccgggggctccacggcccaccccagacactcaccctgga
gctcccagacctggccctgacgcccagcctaaacccaccgacctgcccctgggcccccct
ccttccggaccccctccagtgagacatgtcccctccccgatgcagccaacaatgcagccc
cagtctgcctctccagcccagccacccatgcaggctcccatgcaggcccagtctgcccct
ccagcccagccacccatgcagccaaccatgcaggctcccatgcaggcccagtctgcccct
ccagcccagccacccatgcaggctcccatgcaaccaaccatgcaaccaaccatgcaacca
accatggctgccccaatgcagccaaccatgcaggctcccatgcagccccagtctgcccct
ccagcccagccacccatgcaggctcccatgcagccccaaatggctgccccaatgctgccc
acacaggccggagcagggctaggggctaccggggctgtggccccccaggggctgtcctcc
cccaagccccctccccgctcccgttcctctcatgtcctgccccctgagaccaccactaca
gagaatgcccctgcaacccagatcaatggggtgaatggaatccaaagagaagcacaatgg
aagcccgaaccctttgacacactcacctctgacctctccgcctcttggctcaacacccaa
tcactgaccaggacctcctccttacgctcagctcctaccctccctacttcctctatcacc
ctcccttcatccctccactccacccctctgtccaccctgcagggcttcgacgacgactct
tcctccaccctccccccttccctcacccggtctctcctcccccctcccccggtcccatct
cgaagtaggtcccaggaggccctgcagcggggctctcccaacccctttctgagtgatccg
gtcccagcccgtcccaacagcaccaaccccttcactggtcctctggtgcagcagggtcag
aggcgctccctgacacctgacttccttgcccagcagaaggcctcaaggcctggtctcgac
aggaccatgtctgccttcacccagcccctcgcccctaccccagccccgttcccagctttt
gcccccaacatgacgccaggggcacctgcaccccctccatcgctccaccggacgatgtcc
ctgcttggcccatcgatgacccccctcatccctgctccagcgctccctctcctgactgct
ccctctctccctgcccctatgctccccctggctcttcctctctctcgccctcttcttcca
gcccctgccctccccctgtctcctccctcctccacccctgacctccccctgtctcctccc
tcctccacccctacccccctgtcgtcccgcccccagccccctcctccccctcgggcccag
ctgtgggtgaccttcgatgatgattcagtcctccccgtcccagccaaggctccaccagca
gccccaactgcttccacctcccccccatctctcacccagactcagttctcctgctctggt
ttcgactctgacccacactgggccactggctccaccaccttgacctccacattcctctcc
cggccccctccgatcccagccagggtggtcccaggcagcagccagcccccgctcccagcc
cgagccacaaacaacctccctttccccaaggacttcactgagagatag
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integrated database retrieval system
