Oncorhynchus mykiss (rainbow trout): 110510303
Help
Entry
110510303 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110510303
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110510303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110510303
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110510303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110510303
NCBI-ProteinID:
XP_021447377
UniProt:
A0A8C7RG14
LinkDB
All DBs
Position
Y:complement(46939593..46948417)
Genome browser
AA seq
260 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGDGGGAPR
GRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMT
YAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNGRSNSRSRSFSPP
RRSRPSPRYSPRHSRSRSRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataagtatggggcgatccgagatatcgatctgaagaaccggagaggaggacct
ccgttcgcttttgtggaattcgaggaccccagggatgctgatgatgcggtgcatggccgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagtgggcgtggg
ggagggagagggggtggtggcggcggcaggggtggcggcgatggaggaggagccccaaga
ggacgatacggacctccctcacggcgctcagagtacagagtcatcgtctcaggtctcccc
tctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgatgtatgttac
gctgacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggaggacatgacc
tacgctgtccgcaagctggacaacaccaagttccgctcccacgagggagagactgcgtat
gtgcgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgctctcgtagc
cgtagcaacgggcgtagcaacgggcgtagcaacagccgctcgcgcagcttctcaccgccg
cgacgcagccgtccctcgccacgctactcgccacgacactcccgatcacgctcccgcagc
tag
DBGET
integrated database retrieval system
