Oncorhynchus mykiss (rainbow trout): 110510589
Help
Entry
110510589 CDS
T07259
Name
(RefSeq) poly(A) polymerase gamma-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110510589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110510589
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110510589
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110510589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
110510589
NCBI-ProteinID:
XP_036816481
LinkDB
All DBs
Position
23:complement(3950790..3974808)
Genome browser
AA seq
832 aa
AA seq
DB search
MKEMSANSNSMHGGQQPQKHYGITSSISMAFPREVDHQYTHKLSEAMKPFGVFEDEDELN
HRLAVLGKLNTFVKEWIAEISETKNLPPSTITNVGGKIFTFGSYRLGVHTKGADIDALCV
SPRHVERTDFFDSFFAKLKLHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSHLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSSSTRTIMSEEFKYGLSVTDDILQGKTDWS
KLFQPPNFFLKYKHYIVLTASASTEENQLEWIGLVESKIRVLVGNLERNEYITLAHVNPT
SFPGNKESCSENEFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD
GMKIEATHVKKKQLHQYLPVELVQRKKRSIVELNRNSNGGSSKRSSLDGSQLDSSRDTDS
GTPFSSPTSVCKPSRPAASDTDDSLTPPKLPASLFVESSSSVPDVSPPRTDPEKGLSIPV
IGSKSKPSAPTGPVGSTIPTVVGRSVVSLGTTEQHQNGSKRLHSPTLEDQSKRLKDSAEP
LADVLTFKEPFPPSGDGREQGDGVQVVSPPAGSTIPTVVGRSVVPCLGSSRDTSGPTEQS
QNGATAAAKRPHSPTQDGPPKRIRDPADLLVSGDDSAFKEPFPLSSDGQEQGDGVNVESL
GGVKAMPIPTIDTSRTQRLPSMELPDVTSPLPSSNHQRVVKNSIRLALNRHR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagcgaacagtaacagtatgcatggcgggcagcagcctcagaaacac
tatggcattacctcatccattagcatggccttccccagggaggtggaccatcagtacaca
cacaagctcagcgaggccatgaaaccctttggggtgtttgaggatgaggatgaactcaac
cacagactcgcagttcttggaaagttgaatacatttgtcaaggaatggattgccgagatc
agtgaaacgaagaacctcccaccatcgacgataaccaatgtgggggggaagatcttcacc
tttgggtcttaccggcttggagttcacactaaaggggcggatattgatgccttgtgtgta
tcgccgcgacacgtggagaggacagacttcttcgactcattctttgcgaagctcaaactg
cacgaagagatcaaagacctacgggcggtggaggatgcctttgtacctgtgatcaaattc
aagtttgacggcatcgagattgacctgctgtttgcgcggctggctctgcagtccatccca
gataacctggatctgagaggagactcccacctgaggaacctggacatccgctgtatccgc
agtctcaatggctgcagagtgacagatgagatcctgtacttggtaccaaacaaggagaac
ttcagactaaccctgagggccatcaagctgtgggccaaacgccgggggatctactccaac
atgttgggcttcctgggtggagtctcctgggccatgctggtagccaggacctgccagctc
taccccaacgctgtggccgccactctcgtacacaagttcttcctcgtcttctccaaatgg
gaatggccaaatcctgtgcttttgaaacagcccgaagacagcaatctgaatctgcctgtt
tgggatccacgagtgaatccgtcagaccggtaccacctgatgcccatcatcacgccagcc
tacccccagcagaactctacctacaacgtctcctcttccacacgcaccatcatgagcgag
gagttcaaatacggtctcagtgtcacagatgacatccttcaggggaaaaccgactggtcc
aaactgttccagccacccaactttttcctgaagtacaagcattatattgttctgactgcc
agtgcttccacagaagaaaaccaattagaatggattggtctggtggagtctaagatccgt
gtcctggtggggaacctggagaggaatgagtacatcaccctggcacacgtcaaccccaca
tccttccccgggaacaaggagagctgtagcgagaacgagtttgtctccatgtggttcatt
gggatcatcttcaagaaagtggagaacgctgagagcgtcaacatcgacctgacctacgac
atccagtccttcacagatacagtttacaggcaggccaacaacatcaacatgctgaaggat
gggatgaagatcgaagcgacacacgtgaagaagaagcagctccaccagtaccttcctgtt
gagctggtgcagaggaagaagaggagcatagtggagctgaaccggaactccaacggcggg
agttccaagcggtcctctctcgacggcagtcagctggacagttccagagacactgactcc
gggactcccttcagctctcccacctccgtctgcaagccgtccaggccggccgcctcagac
acagacgacagtttgacaccccccaagctgccagcctctctgtttgtggagagcagctcc
tcggtgccagacgtctcgccacccaggaccgatcctgagaaggggttgtccatccccgtc
attggatcaaagtccaagccctctgccccaacgggcccagtcggtagcaccattcctacg
gtagtgggtaggagcgtggtctctctcggcactacagagcagcaccagaacggatccaag
agactccactcccctacgctggaggatcagtccaagaggctgaaagacagcgcagagccg
ctggctgatgtgttgaccttcaaggagccgttccctccatctggcgacggcagggagcaa
ggggacggagtccaagtggtgagtcctccagcaggcagcaccattcctacagtagtaggc
aggagtgttgtaccctgcctgggctcctctagagatacatccggcccgacagagcagagc
cagaacggagccaccgctgcagccaagagacctcactcccccacacaggacggacccccc
aagaggatacgagaccctgcagatctgctggtgtccggtgatgactctgcattcaaggag
ccgttccctttgtctagcgacggccaggagcaaggggacggagtgaacgtcgaaagtctt
ggaggggtaaaggctatgcctattccaactatcgacacatcaagaacacagagacttccc
agtatggagctgccagacgtgacctctcccctccccagcagtaaccaccagcgggtggtt
aagaactccatcagactagccctcaacaggcacaggtaa
DBGET
integrated database retrieval system
