Oncorhynchus mykiss (rainbow trout): 110510929
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Entry
110510929 CDS
T07259
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110510929 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110510929 (cnga1b)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110510929 (cnga1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tim54
CDC45
MDM10
Sec62
PAP2_3
NPR3
GrpE
CLN3
PFF1_TM
PPP4R2
Pox_Ag35
DUF6474
Zip
ADI
Motif
Other DBs
NCBI-GeneID:
110510929
NCBI-ProteinID:
XP_036814323
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All DBs
Position
21:complement(64483522..64518038)
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AA seq
662 aa
AA seq
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MSVKVTPVTPAGPAHPQPCSPPLIVLQDMEGETEERGEVHRCLRSSVVQVPFNMNNSNSN
EEEEQKKKTSKKERKEKKERKEKKEKEKQEKRERKEQKKKEKEEKELKEKEEKEKKEKEE
KAKAEAPKEITVIDPAGNMYYNWLLVITIPVMYNWTLIIARASFEELQTDFLIYWFIIDC
VSDVVYLADMVFRTRTGYLEQGLLVKDQKKLIDRYINSLQYKLDLISMIPTDIFYVYFGL
NYPEIRLNKLFRINRMLEFFQRTETRTNFPNVLRISNLVMYIVIIIHWNACLYYSFSKAI
GFGANKFVYPDTTDPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVQNSEYFFVVTDFLVG
VLIFATIVGNVGSMITNMNAARANFQARIDAIKQYMTFRKVTKDLEKRVIKWFDYLWTNK
KAVDEREVLKFLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDY
ICKKGDIGREMYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILSIKGSRAGNRRTANI
RSVGYSDLFCLSKDDLMEALSEYPDAKAMLEEKGRQILMKDNLLDLEVAAQGPDPKDMEE
KVERMTATLESLQTRYARLLAEHEAGQSRLKRRVTRLEKKVVAPVQEVEEIGVEMGTVAT
TE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaggtgacccctgtgacccctgctggccccgcccacccccagccctgctct
ccgccactcatcgttctgcaggatatggagggggagacagaggagaggggcgaggtacac
aggtgtttaaggagctccgttgtgcaggttccgttcaacatgaacaacagcaacagcaac
gaggaagaggaacagaagaagaagacaagtaaaaaggagaggaaagagaaaaaggagagg
aaagagaaaaaggagaaagaaaaacaggagaaaagggagagaaaggaacagaagaagaag
gagaaagaggagaaggagttgaaggagaaagaggagaaggagaagaaggagaaagaggag
aaggccaaagctgaagcgcctaaagagatcacggtgatagacccagcaggtaacatgtat
tataactggctccttgtcatcaccattcctgtaatgtacaactggaccctcatcatagcc
agggccagttttgaggagctccagacagactttctgatctactggttcatcatagactgt
gtctctgatgtggtctacctggcagatatggtgttcaggaccaggacaggttacctggaa
cagggtctcctggtgaaggatcagaagaagctgatagatcgctacataaacagtctccag
tacaaactagacctgatctccatgatccctactgacatcttctatgtgtacttcggcctc
aactaccccgagatacgactcaacaagctgttcagaatcaacaggatgttggagttcttt
cagaggacagagactaggaccaacttccccaacgttctgcgtatctccaacctcgtcatg
tacatcgtcatcatcatacactggaacgcttgtctctactactctttctccaaggcgatt
ggtttcggagctaataagtttgtgtaccccgacacgacggaccctgagtttggtcgtttg
gtccggaaatatgcctacagcatgtactggtcgaccctgacactcacaactatcggagag
actcctccccctgtacagaactctgagtacttcttcgtcgtcacagacttcctggttggc
gtgttgatctttgctaccatcgtcggtaacgtcggttccatgatcaccaacatgaacgct
gccagggcaaacttccaggccaggatagatgccatcaaacagtacatgactttcagaaag
gtcaccaaggacctggagaagagggtgatcaagtggtttgactacctgtggaccaataag
aaggcagtagatgagagggaggtgctaaagttccttcctgataaactcagggctgagatc
gctatcaacgtacacctggacacactgaagaaggtgcgtatctttgctgactgtgaggct
ggtctcctggtagagttggtattgaagcttcagcctcaggtctacagtccaggtgattac
atctgtaagaagggagacatcggacgagagatgtacatcatcaaggaagggaagctggcc
gttgtcgccgacgacgggatcaaacagttcgttgtccttagcgacgggagctacttcggg
gagatcagtattctgtccataaagggttccagggctggaaacaggaggactgctaacatc
aggagtgttgggtactctgacctgttctgcctctctaaagacgacctcatggaggccctg
tcagagtatcctgatgctaaagccatgttggaggagaagggacggcagatcctgatgaag
gacaacctgctggacctggaggtggcggcgcagggcccggaccccaaggacatggaagag
aaggtggagaggatgacagcaacgctggagtccctccagacgcgatacgcccggctcctc
gccgaacacgaggcgggccagagcagactgaaacgcagagtcacccggctagagaagaaa
gtggtggctccagtccaggaggtcgaggagatcggggtggagatgggtactgtggcaacc
acagagtag
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