Oncorhynchus mykiss (rainbow trout): 110511038
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Entry
110511038 CDS
T07259
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110511038
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110511038
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110511038
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
110511038
NCBI-ProteinID:
XP_036815551
UniProt:
A0A8K9Y106
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Position
23:6339987..6367016
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AA seq
753 aa
AA seq
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MAERSTMSEQDKHLTEKEICSDSETADCVEEAFVFGEDLELNRFDGLPFSSRYYKLLQER
QSLPVWKAREEFLDILVNNRLVIVSGTTKTGKSTQIPQWCAEFCLSARYQHGVAVSTQIH
SQQAVGLALRVADEMDVNIGHEVGYTIPLETCCSTDTVLRFCTDALLLREMMSDPMLEHY
GAIVIDQAHERTVSTDILLGLLQDILVHRPDLRVVILTVSSMTDRLLAHYGSNVPVVSLE
APCPAEVVYSNCSSKDYFYSALRLVLEIHRTKEEGDVVLFLASVQEVVCARAILQREGTR
LGADLGELVPVVLCPGQGRTPSLLGEGMGSRGSVTTRCRLVFLSTSQGEDMFWAVDSVNF
VIDVGVEKRYVYHPRIRANSEVLRSISRYQADIRKQLTGPTGKCFCLYPEERVLPIETSP
QILDTNLTFTILFLKRMEIAGLRHCDFITRPDPEGLMQSLEELDYLAALDDDGNLSEIGI
IISELPLDAQMAKALLASCEFDCVNEMVTIAAMLSAPSCFLEPPVGRTQEVQQCHRKFRH
PEGDHFTLINIYNAFKYSQRETYFSVEKWCQDYHLNHRALQTADAIRSELTDILKRIELP
ISETSFGTKTNTLNIKRALLAGFFMQIARDVDGSGNYFMLTNRHMAQVHPASSYGAKAHQ
LGFPEWVLFHEYTLSGNHGIRTVSEISPAVFIQTAPQYFYSNLPPSESKDLLQHILERDG
SGRKDKQQTLTINSKADKDCSTVAQSYDRCVLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagatcgaccatgtccgagcaggacaagcatttgacggagaaagagatttgt
tcggattcggaaactgctgactgcgtggaagaagcgtttgtcttcggagaggatctggag
ctgaaccgatttgatggattgcctttctcctctcgttattataaactactgcaagagaga
cagtctctacctgtttggaaagctagagaggaatttttggatatcctggtgaacaatcga
cttgttatagtatctggtacaactaaaactgggaaaagtacacagatcccccagtggtgt
gcagagttctgcctgtcggcccggtaccagcacggcgtggctgtgtctacccagatccac
tcacagcaggcggtgggcctggccctcagggtggccgatgagatggacgtcaacattgga
catgaagtgggctacaccatccccctggagacctgctgttctactgacactgtgctcagg
ttctgtacagatgccctgctactgagggagatgatgtctgaccccatgttggagcactat
ggggccatcgtcatcgaccaggctcatgagagaaccgtcagcacagacatactgttggga
ctgctccaggacatcctggtccatagaccagacctgagggtggtgatcctgactgtgtcc
tccatgacagacaggctcctggcccactacggtagtaacgtccctgtggtcagtctggaa
gccccctgtccagctgaggtggtctatagtaactgtagtagtaaagactacttctactct
gctctgagactggtactggagatccaccgcaccaaggaggagggagatgtggtgctgttc
ttggcctcggttcaggaggttgtctgtgcccgtgctatcctccagagagagggtaccaga
ctgggggcagaccttggggagctggtgcccgtggtcttgtgccctgggcagggtcggaca
ccctctctcctgggggaggggatggggagtaggggatccgttacgaccaggtgccggttg
gttttcctctccacaagccagggagaggacatgttctgggctgtggactctgttaacttt
gtcatcgacgtaggagtggagaaaagatatgtgtatcatcccaggataagggccaactct
gaagtactacgatccatcagcagataccaggctgatatcaggaagcagctgactggaccg
acagggaagtgtttctgcctgtaccctgaggagagagtactccccatagagacatcccct
cagatcctggacaccaacctcaccttcaccatcctcttcctcaagaggatggagatcgca
gggctgagacactgtgacttcatcaccagaccagatccagagggtctgatgcagtcgcta
gaggagctggattacctcgcggcattggacgacgatgggaacctatcagagatcgggatc
ataatctctgagttgccattggacgctcagatggccaaggctctgctggcgtcctgtgag
tttgattgtgtgaacgagatggtgaccatcgcagctatgctatcagcaccaagctgcttc
ttggagccacctgttggcaggacccaagaggtacaacagtgtcacagaaagttccggcac
cctgagggagaccacttcaccctcatcaacatctacaacgccttcaagtacagccagaga
gagacatacttcagcgtagagaagtggtgtcaggactaccatctgaaccaccgcgccctt
cagacggcagacgccatcaggtcagagttgacggacatcctgaagagaatagagctgccc
atctctgagacgtccttcggaaccaagaccaacacactcaacatcaagagagctctgctg
gcagggttcttcatgcagattgcccgtgatgtggatggttcaggaaactacttcatgttg
accaacagacacatggctcaggtccaccctgcctccagctacggggccaaggcacatcaa
ttgggttttccagagtgggtgctgttccatgagtatactctctcgggaaaccacggtatc
cggacagtctctgaaatctcccctgcagtgttcatccagacggcccctcagtatttctat
tccaacctgcctcctagtgagagtaaagacctactacagcacattctggagcgggacgga
tctggacgtaaagacaagcaacagaccctgaccatcaacagtaaagcagataaggactgc
agtacagtggctcagtcttatgaccgatgtgtgctacagtga
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