Oncorhynchus mykiss (rainbow trout): 110511300
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Entry
110511300 CDS
T07259
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110511300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110511300
04090 CD molecules [BR:
omy04090
]
110511300
04091 Lectins [BR:
omy04091
]
110511300
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110511300
CD molecules [BR:
omy04090
]
Proteins
110511300
Lectins [BR:
omy04091
]
I-type lectins (Siglecs)
110511300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set_3
Glyco_hydro_36C
Sp38
Motif
Other DBs
NCBI-GeneID:
110511300
NCBI-ProteinID:
XP_036845039
UniProt:
A0A8K9WSU9
LinkDB
All DBs
Position
9:complement(78899094..78964044)
Genome browser
AA seq
1282 aa
AA seq
DB search
MCVSQYQRGSSPPALLLPLFLLSSSHLLAHGAIQIPQNYKVQNMLQPPTLTKMPESLTAF
SLDDVMLLCEATGIPTPSFRWVKDGKKLNWMGHNGSGNFTAHGDKPLSDYQGHYRCYADN
TLGTAMTHTVKLITESTPTLPKQKRSHKTAEEGASVVLHCNPPRSSTIPHIHWMDKKLLH
IGQSERVTTGLDGNLYFANVLKNDSRDDYTCNAQYISARTILPKEPISLTVTPSNDVARG
RKPQLMQPQGPHSSHLALRGHSLVLECIPKGLPTPSVLWKHMDVNLSETGAWTDNHGRWL
RFDSITQKADGEYECLASNTHGSVTHSYTVTVEAEPYWVKEPPSLLYSPGETVRLDCQAE
GIPTPTVTWSINGEPVAEVDIDPRRRVTGGVLVLKDVVFGDTAVYQCEATNKHGNILKNT
YIYVIELPAQILSSDGVVYQVTEGGVARLHCEAFGSPRPQVTWESEDLQNTLLSDSRVSQ
LTNGTLELFNSSREDSGVYTCSITHSNISITAHLEVLKRTVMLIGPQAVEVTRGGDSWLD
CHFTFDPHLNPPQILWRKDGQKIMESSLGDKYTLLGNGTLRVTDVQSADEGLYSCEVITD
LDSVLASGSITVVACPSPPVFLSLSEEQDHNLTLSWTPGNTHNSPTTEFVVEVKEEKHPE
GKWESHRVTGDVNHLELHLLPYSTYRFRVSGVNRLGRSDPSEISEAYSTLPTVPESYPLN
VRSESTEPGTLVIMWEEIDRRLYNGSGFQYKVSWRQVQEHHWSHTHVPHPPYLVNGTRAF
SSYEMKVQAINSLGEGPHPVPVIGHSGEDYPLASPSKISVSVDNSSAIVRWQPVDTHTVQ
GHLLGYKIYLKRLGSQGGREHRVMGRREVREIKGGVERGTERKEERWVVEVDGNKTKEVV
TGLKLYSLYELSMTTFNRKGEGPHSPTHPFRTPEGVPGPPASLDFESPSETELTLHWRPP
TQPNGQLVGYVLQYQQISDSRNSPPQVEVIYDPTVTHLPLEGLDPHSRYVFYLRGRTSAG
QGPPITRECATLLDGVPPSNISTVVGERSVNLSWVPGDRYRNHSFHIKYLSKTVGGKWEE
SEQVNTLQAFYSLTGLQPGTQYRLLITHGNYTHWEDEIQTTGPELRGVEGDFATQGWFIG
LISAVVLLLLLLLVLCFIKRSKGGKYAVKDKEESQMDSEARPIKDETFGEYRSLESDGDE
KRSVSQPSLCVESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPAPTGNESSGPASP
VNLDPPPPPIGPSFAGILDRTS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatctcagtatcagaggggcagtagcccccctgccctcctcctccctctgttc
ctcctctcctcctctcatctactcgctcatggagccattcagatcccccaaaactataaa
gtacagaacatgttacagcctcctactctgacaaagatgcctgagtccttaacggccttt
tcattagacgatgtcatgctgctctgcgaggccactggcatccccacacccagtttccgc
tgggtaaaggatggtaagaagttgaactggatgggacataatggttctggaaatttcaca
gcccatggcgacaagccgctcagtgattaccaaggacactaccgttgttacgccgacaac
accctgggaacagccatgacacacaccgtcaaactcatcactgaatcgacaccgaccctc
cctaagcagaagagatcacataaaacggcagaggaaggagctagtgttgttctccactgc
aaccctcccaggagctccaccatccctcacatacactggatggacaagaaactgctccat
ataggtcagagtgagcgtgtgacgacaggtctggatgggaacttgtactttgccaatgtg
ttgaagaacgacagtcgagatgactacacttgtaatgctcaatacatctctgcgaggacc
atcctgcctaaagaacccatctcactcactgtcacacctagtaatgacgtggctcgtggc
aggaagccccagctgatgcaacctcagggcccccacagctctcacctggccctcaggggc
cacagcctggtactggagtgtatacctaaagggcttcctactccttcggtattgtggaag
catatggatgttaatctgtcggagacaggagcctggacagataaccacggcaggtggctt
cggtttgacagcataacccagaaggcagacggagagtatgagtgtctggcttcaaacaca
catggatccgtcacacactcctacactgtcactgtggaagctgagccgtactgggtgaag
gagcccccgtcactgttgtactcccctggggagacagtgaggctagactgtcaggccgag
ggtatccccacccctactgtcacatggagtataaacggagagcctgtcgcagaggtagac
attgaccctaggcggcgggtgaccggaggggtgttggtcctaaaagatgtagtgtttggt
gatacggcggtgtaccagtgtgaagccaccaacaaacacggaaatatcctcaaaaataca
tacatctatgtcattgagctgccagctcagatcctgtcctctgatggggtggtatatcaa
gttacggaggggggcgtggccagactgcattgtgaggccttcgggtcaccccgtccacag
gtcacatgggagagtgaggatctccagaacaccttgctgtcggacagtcgtgtgtctcag
ctgaccaatgggacgttagagctgtttaatagtagcagggaggacagtggagtctacacc
tgctccattacacacagcaacatctccatcaccgctcacctggaggtcctcaaacgtacg
gtgatgctgatcggtccccaggctgtagaggttacgaggggaggagactcttggttggac
tgtcatttcacctttgacccccatctgaacccaccccagatcctctggaggaaagacgga
cagaagatcatggagtcttcactgggagacaagtacactctacttgggaatggaaccctc
agagtgacagacgttcaatcagcagacgaagggctttactcctgtgaggtcatcacagat
ctggacagcgtattggccagtggctccatcactgtagtggcctgtcccagccctccagtg
tttctgtctctgtctgaagagcaggaccacaacctgactctcagctggacacctggaaac
acacacaactcccccaccacagagtttgtggtggaggtaaaggaggagaaacatcctgag
gggaagtgggagtcacaccgtgtgactggggatgtcaatcatctggagttacacctcctc
ccgtactccacctaccgcttccgggtcagcggggtcaacagactggggaggagcgacccg
tcagaaatctctgaggcctacagcaccctacccacagttcctgaaagttaccctctaaat
gtgcgtagtgagtctacagaaccaggaacactggtcatcatgtgggaggaaattgaccgt
cgtttgtacaacgggtcggggttccagtataaggtgtcatggcgacaggttcaggagcat
cactggagccatacccatgttccacatcctccctacctggtgaacggaaccagagcgttc
tctagttatgagatgaaggtccaggctatcaactctctgggcgaggggccgcatcctgtt
cccgttataggacactctggagaggactacccgctggcctctccatctaaaatcagtgtg
tcagtagataacagctcagccattgtaaggtggcagccggttgacacacacacggtccag
ggtcacctgctgggttataagatatatctgaagaggttgggttcccagggaggaagagag
catagagtgatgggacgcagagaggtgagagagattaagggaggagtggagcgagggacg
gagagaaaggaggagaggtgggttgtggaggtggacggcaacaagacaaaagaggtggtg
acggggctcaaactctattccctgtacgagctgtcaatgacaaccttcaacagaaagggg
gaggggcctcactcaccgacacaccccttcaggacaccggagggagttcctggtcctcct
gcctctctggattttgagagtccgtcggagacagagttaacccttcactggaggcccccc
actcagcccaacggacaacttgtgggatatgttctacagtaccaacagatttcagacagc
cgaaacagtcctcctcaggtagaggtgatctatgaccccacggtgacccacttaccgttg
gaaggtctggaccctcatagccgctacgtcttctacctgaggggacgcacatctgccgga
cagggacccccaatcacacgggagtgtgccaccctgctggacggagtacctcccagtaac
atcagtacagtggtaggagaaaggtcagtcaacctgagctgggtccctggagacagatat
aggaaccacagcttccacatcaaatacctcagcaagactgttgggggtaagtgggaggag
tcagaacaggttaacacgttgcaggcattctattcgcttacgggtcttcagcctggaaca
cagtaccgcctcctcatcacccatggcaactacacacactgggaggacgagatacagacc
accggtccagagctacgtggtgtggaaggtgattttgctactcaaggctggttcataggg
ctgatcagtgctgtagtgttgctgttgttgctgcttctggttctctgtttcatcaagagg
agtaaagggggcaagtacgcagtgaaagacaaggaagagagtcagatggactccgaggct
cggccaatcaaagacgagacgtttggagagtacagatctctggaaagtgatggtgatgag
aagcggtcagtcagtcagccatctctgtgtgtggagagtaaactggggagtgacgactcc
cttgccgaatacggagacagtgtcgacatccagttcaacgaggacggctctttcattggt
caatacagcggccgagggcccgcccctacaggaaatgagagctctggccccgcctcccct
gtcaatctagacccaccgcctcctccgataggcccctccttcgctggaatactggacagg
accagttaa
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