Oncorhynchus mykiss (rainbow trout): 110511347
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Entry
110511347 CDS
T07259
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omy01001
]
110511347
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110511347
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110511347
Protein kinases [BR:
omy01001
]
Serine/threonine kinases: Other
TAF1 family
110511347
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110511347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
VapE-like_dom
nSTAND_NTPase5
AAA_16
LRR_14
RsgA_GTPase
nSTAND3
ABC_tran
AAA_22
DUF815
Auts2
Motif
Other DBs
NCBI-GeneID:
110511347
NCBI-ProteinID:
XP_036828017
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSSPSLSPRTLDVLPLSPVDGEVAPDSMCSYPPGSLSDCASQALSPPSASPLSPRTEEYI
HQAKAHLRGMCQEMEAGLSLASHYVDVRLVQRQILIGSGKNTSKCPEKDLVVIGDAERRR
GSLARSQVFESSPGAKPKRSIVLLGNAGMGKSTLIKKLCVDWSDGLLPQFDFVFLLDGKA
LTLPPEPTYSLRSLLLHLSCPHPRDVFNQVLSVPERVLVIFDGFEVVRDLEGLLQSPADD
SKGENYSVRQLFSGLLQRKLLPGCSLLLSARPRGTVSGLLKRADSLLELSGFSPPDIERY
LGQYFSGQSLEAPTSVPASDSIPVPNSVLAPVPDSVLASAPVSVPVPVSVPASVEEREEK
REEEEREREDGEEEKEKEREEENRCVLSELSGLAWQGVKGHSSLLTLTLDNTVCVKLRLF
GLRTGLVHSHWLRGEQGRDCGGGGGGVSSDNILSWAHPFLQSFLGGAHLSVSSCVSDRAL
LAQILPQPRGRRRPQGECLDLAQRFAVGLLFRNNAELRDLATLDTGAMKVVAAKRAAVIS
HLENLHHGDLSPAWLLEACHCVYETGDIRLVRHLVRNLPEVLSFQGVPLCPADAFVVWNL
LDQCRTLRRRFCLGLEDTGLRMTGLKLLTGLNNIHSYRACIADTITLWEELEQSGEEELL
KAVVSKLTLNPFRATQVSHVQHLSTLVNIHTSRRLSESQSDGVLGEGLPAVRDLHKLEFE
LGPVDGPLALPKLLELLPALHSLHHLDLENSKLGDSGAEGLAGAVLSLSSLQIINLSQNC
IGDQGIESLAPALSTLPSLHCLSLYSNVISDGGAESLAAVLPQMTSLSDLDVKYNSFTAL
GAQSLASSLRDCPWIKSLGMWNVCIPYGVLERLQQQDPRIQLL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccctcgctgtctcctagaaccctcgacgtcctacctctctctccagttgac
ggtgaggtagctccagactcgatgtgttcatatcctcctgggtctctgtctgactgtgcc
agccaagccctgtctcccccctctgcctcccccctctcccccaggacagaggagtacatt
caccaagccaaggctcacctgaggggaatgtgccaggagatggaggcgggccttagcctg
gcgtcccactatgttgacgtgcgattggtccagaggcagatcctgattggctcagggaag
aacaccagcaagtgcccggagaaagatttggtcgttatcggagacgcggagaggaggcgg
ggctcgttggccaggagtcaggtgtttgagagctcccccggggcaaaacccaaacgttcc
atcgtgttgctaggcaacgccggcatgggcaaaagcacgctcatcaagaagctctgcgtt
gattggtccgacggcctcctgcctcagtttgactttgtgttcttactggacggtaaggct
ctgaccctcccccccgagccgacctatagcctacggtccctcctcctacacctctcctgc
ccccacccacgggatgtcttcaatcaggtcctctctgtcccggagcgtgtgctggtgata
ttcgatggcttcgaggtggtgcgtgacttggaggggctgcttcagtctccagcggatgac
agtaaaggggagaactacagcgttagacagctgttctcaggtctgctccagaggaagctg
ctaccaggctgctctctgctcctctctgcccgaccacgaggcaccgtcagtgggctgctg
aaacgggctgacagcctcctggaactctctggcttctcccctccggacatcgagagatac
ctgggacaatacttctctggacagtccctagaggccccaacctcagtcccagcctcagac
tcaatcccagtcccaaactcagtcctagcaccagtcccagactcagtcctagcctcagcc
ccagtctcagtcccagtcccagtctcagtcccagcctcagtcgaagagagagaggagaag
agggaggaggaagagagagagagggaggatggagaggaagagaaagagaaagagagagag
gaagagaacaggtgtgttctgtcagagttgagcggtctggcttggcagggggttaaaggt
cattcatctctcctgaccctgactctggacaataccgtctgtgtcaagctgcggttgttt
ggcctgaggactggactggtccattctcactggctgaggggggagcagggcagagattgt
ggcggtggcggtggcggcgtgagttccgacaacatcctgtcctgggcccaccctttcctg
caaagctttctgggcggggcccacctgtccgtctccagctgtgtgtctgaccgtgctctg
ctggcccagatactaccacagcccagggggaggcgacggcctcagggagagtgtctggac
cttgctcagagattcgctgtcggtctgcttttccggaacaatgcggaactccgggatctg
gccaccctggataccggcgccatgaaagtggtggcggccaagcgagccgctgtgatatca
cacctggagaaccttcaccatggcgacctgagccccgcttggctcctggaggcgtgtcac
tgcgtttacgagacaggcgacatccgcttggtcaggcacctggtacggaaccttcccgag
gttctgtcgttccaaggggttccgctgtgccccgccgacgccttcgtagtgtggaacctt
ttggaccagtgtagaacgctgaggaggaggttctgtctggggctggaggacacgggactg
aggatgacaggattaaaactactgacgggtctcaacaacatacactcatacagggcgtgt
atcgctgacaccatcactctgtgggaggagctagagcagagtggggaggaggagcttcta
aaagcggttgtgtccaagttgacccttaaccctttcagagccacacaggtgtcccacgtc
caacacctgtccacactggtcaacatacacacaagcaggagactgtcagagagccaatca
gatggtgtcctgggggagggtctaccggcagtcagagatctccacaagctggagtttgag
ttggggccagtggatggtcctttggcgctccctaaactcctggagctgctgccagccctg
cacagtctacatcacctggatctggagaacagtaaactgggggacagtggggctgagggg
ctggctggagctgtgctgtctctctcctctctgcagattatcaatctgtcccagaactgt
ataggagaccagggaatagagagtctggctcctgctctgtctaccctcccctcgctgcac
tgtctcagtctgtacagtaatgtgatatctgacgggggtgctgagagtctggctgctgtt
ttacctcagatgacatcactcagtgacctggatgtcaagtacaacagtttcacggccctg
ggagctcagagtctggcttccagtctgagggactgtccgtggatcaagagtctggggatg
tggaatgtgtgtattccctacggagtgttagagagactgcaacaacaggacccacggata
cagctgctctag
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