Oncorhynchus mykiss (rainbow trout): 110511355
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Entry
110511355 CDS
T07259
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110511355
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
110511355
TFIIIC, fungi type
110511355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_14
TPR_1
TPR_19
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_9
TPR_10
ANAPC3
TPR_EMC2
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
110511355
NCBI-ProteinID:
XP_036807487
Ensembl:
ENSOMYG00000024953
LinkDB
All DBs
Position
18:7758036..7797212
Genome browser
AA seq
980 aa
AA seq
DB search
MSAFSSELIDYLEGRISFEEFEIRREERKAKLKVSNEGRSEEDEEIGPDDTLPSTSHGRS
PRKCSQKRPAAGPEEGVSPSVQKAFASMMEEGTETEQTEEEEEEEEDDEDDDYEEEEEED
SEEERKVEAKEDEEGPSAGDVFALEMELNRENKKMMKERRNRSKLPRALRGLMGEANIRY
ARGDKEDAVLMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDCEEW
VKLADMSLEQDNIRQAIICYTKAIKYDPSNVRYLWERCSLYEQVGEHKQSMDGYRRILNL
LPPTDGEHFMQLSRDMAKSYYESSDLPSAMGVMEKALRRHPELVTDESINMAAELYIANH
QHDKALQVLVQFCGIVLERGEPKPDLVEEENPEEEQEKMESEENPEEQEKMEAEENPEEQ
KKMEVEEEEEQKKMEAEEEEEQKKMEAEEENPEKEKEMKTATTEEPGETGGEVREVVVPD
HVPVDIRVKLMVCLIHQHVYRPLDSMLTSLMEQSPEELGDLYLDVAEAFLDQGEYNSALP
LLSALVCSERYNLAVVWLRHAECLKALGHMEVAVKSYNKVVQMAPLHLEARLCLSTLQQQ
LGRPLCALKALEPMYDPDTLAQDASAAQQELKLLLHRSTLLRSQGRLDDYLDTMLTMLAM
LLKVAMTRAQVCVKASMWAGVRHLRLVKVSKDLVSDIHDQEAAYQDISGKTSVLSREDWW
LLLVRCVCTLCEMKRFKEAELLVDSSLEFYSFYDVKVKRKELEFFGLSAAFLDHNYRKAY
DYIRLTLMEKQEWPMLWNVFNQVTLHSQDVRHHRFCLRLMMKNPDNHALCVLSGHNALVS
GSFKHALGQYVQAFRSKPDEPLYSLCVGLTFFHMASQKFVVKRHPLILQGFSFLWRYVEQ
RGPCQESMYNLGRALQQMGLAHLAIHYYHKALSFPPLTLEGIADDQVDLRREIAFNLSII
YQASGNTEMVRHLINTYCTV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttcagctcagagctcattgactacctggagggaagaatttcattcgaggag
tttgaaatacggagagaggaaagaaaagctaaattgaaggtatcgaacgaagggcgttca
gaggaagatgaagagattggaccagatgacactctccccagcacttcccacggccgcagt
ccgagaaaatgttctcaaaaacggcccgcagcgggtcccgaggaaggcgtcagcccctct
gtccagaaggcctttgcctcgatgatggaggagggaacagagactgaacagactgaggaa
gaggaagaggaggaggaggatgatgaagatgacgattatgaagaagaggaagaggaggat
tcagaggaggagaggaaggttgaagctaaggaagatgaggaagggccctcagctggggat
gtctttgctctggaaatggagcttaaccgagagaacaagaagatgatgaaggagagacgt
aaccgcagcaagctgccccgggccctaaggggcctcatgggagaagccaacatccgttac
gcccgcggagacaaggaggacgccgtcctgatgtgtatggagatcatcagacaggcccca
ctggcctacgagcccttctccaccctggctatgatctatgaggaccagggggacatggag
aagtctctacagtttggcctgatcgctgctcatctcaaccccagcgactgtgaggagtgg
gtcaagctggccgacatgtctctggagcaggacaacatcaggcaggccatcatctgctac
accaaagccattaagtatgaccccagtaatgtgcgctacctatgggaacgttgcagcctg
tatgagcaggtgggggaacacaagcagtccatggacgggtaccgtcgtatcctcaaccta
ctgccccctactgacggggagcacttcatgcagctgtcacgagacatggccaaaagctac
tatgagagtagtgacctgccgtcagccatgggggtgatggagaaggccctgaggagacac
ccagagctggtgacagacgagagcatcaacatggctgctgagctctacatcgccaaccac
caacacgacaaggcccttcaggttctagtccagttctgcgggatcgtcctggagagagga
gaacctaagccagaccttgtagaggaggagaacccagaggaggagcaggagaagatggaa
tcagaggagaacccagaggagcaggagaagatggaagcagaggagaacccagaagagcag
aagaagatggaagtagaggaggaagaggagcagaagaagatggaagcagaggaggaagag
gagcagaagaagatggaagcagaggaggagaacccagagaaagaaaaggagatgaaaaca
gcgacaacagaagagcctggtgagactggaggggaggttagagaggtggtagttccagac
catgtaccagtggacatcagagtgaaactcatggtctgtctgatccaccagcatgtttac
agacctctggattccatgttgacgtctctgatggagcagagcccagaggagctgggggat
ctgtacctggacgtggctgaggccttcctggaccagggagagtacaactcagccctgcct
ctcctctctgccctggtctgctctgagagatacaacctggctgttgtctggctccgacac
gctgagtgtctgaaggcgctgggccacatggaggtagcagtgaagagttacaacaaggta
gtacagatggctcctcttcacctggaggccaggctgtgtctgtctactctgcagcagcag
ctgggtcgacccctctgtgccctcaaggccctggagcccatgtacgacccagacacactg
gcacaggacgcctccgcagcacagcaggagttgaagctgctgctccaccgctctactctc
ctgcgttcccaaggccgactggatgactacctggataccatgctgaccatgctggctatg
ctgctgaaggtggctatgacgcgggcccaggtgtgtgtcaaagccagcatgtgggcgggg
gtcagacacctgcgtctggtcaaggtgtctaaggatctggtgtctgacatccacgaccag
gaggcagcctaccaggacatcagtggtaagaccagtgtgttgtctcgtgaggactggtgg
ttgctgttggtgaggtgtgtgtgtactctgtgtgagatgaagcgttttaaagaggcagag
ctgctggtagactcttctctggagttctactccttctatgacgtcaaggtgaagaggaaa
gagctggagttctttggtctgtcggctgctttcctggaccataactaccgcaaggcctac
gattacatcagactgacgctgatggagaagcaggagtggcccatgctgtggaatgtattc
aaccaggtgacccttcactcccaggacgtgcgtcatcatcggttctgtctgcgtctgatg
atgaagaacccagacaaccacgccctgtgtgttctcagtggacacaacgccctggtgtct
ggcagcttcaaacacgcactcggtcagtatgttcaggcgttcaggtctaagccagatgaa
cctctgtacagtctgtgtgttggcctcaccttcttccacatggcgtctcagaagtttgtg
gttaaacgccacccgctaatactgcagggattctcattcctgtggcgttacgtggagcag
cgtgggccctgccaggagagcatgtacaacctgggacgggccctgcagcagatgggcctg
gcacacctcgccattcactattaccacaaggctctcagcttccctcctcttacactagag
ggtattgcggatgaccaggtagacctgcgtagagagatagccttcaacctgtcaatcatc
taccaggccagtggaaacactgagatggtacggcacctcatcaacacatactgcactgta
taa
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