Oncorhynchus mykiss (rainbow trout): 110511526
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Entry
110511526 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110511526
04137 Mitophagy - animal
110511526
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110511526
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110511526
04121 Ubiquitin system [BR:
omy04121
]
110511526
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110511526
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110511526
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Others
Others
110511526
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110511526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
110511526
NCBI-ProteinID:
XP_036837696
LinkDB
All DBs
Position
6:complement(91250192..91286961)
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AA seq
1194 aa
AA seq
DB search
MPAVSRGAKDLYLSTNLGDLNKKAEVKPDKINTRSYVQSACKIFKAAEECRLDGDEEKAY
VLYMKYLTVYDLIKKRPDFKQQQEFFLSVLGPTSFKKAIEEAEKLSESLKLRYEEVEVRK
TLEEKERQEEKKRREDKTEKDGGRASPKAGKEIKKVKEQKELKNVTSKAAVSAGGITAEG
LFKMMRDQAITVIVMDARCLRDFQDSQIQVPTQTVISVPEEAINPGITVNQIEANLPDAS
RETWKRRGFVDYIILLDWFSSVTDLKLGSTLQSLKDALFKWDSTTILRSEPMVLEGGYES
WLLFYPMYTSNAKVRPPRTHSYNTLPQLNFSYPSLEEPKPPTPPPPEPDPEPQAPPASLG
SVQVNGGPLEDLTPSTWMEADATDSPHTGFTHPGVDHSKKDPGAGPGTPSQPGGTSKHIP
QIDRTKKPSVRVSDGSKTPLDALPRDLPPSSQNGPSVPQPNRSVKPAFDPAVPLTDEERG
QIHTETAALMEKARREQEQRKQERRTEEEWRERERRENQEKENEEMERRKEEENRTQERK
RLERHKAEEKENGVREEREKRGKEDTPTNSASLDSPAPNRIVTEIKPVQTSPRVPPAGPN
LSLGTPSLSKPLLGDAQPVQTSPRGRPAGPNLSSGTPSRSKPLLGDAQPVQTSPRGRPAA
ALCCVPPKNQAPSPLKLSGDLKRSRQPGRLQHRTVEDYVIPKRELLTRARSEEMGRSVPG
LPVGWMKFLDTVTGTYRYYHSPTNRVHRYPPEVSVPQTPPSTPPTAKQKQPRPAEPDQTM
DRDQEQSKLKRSYSSPDISQDLREEGLKKVTAPITAATRPTFNRETKPSTASVYTKVEIA
RPSAAKIRNLNPVFGGLGASLTGLRNLGNTCYMNSILQCLCNTPAMVDYFNKNLYQEDIN
RANILGHRGEVAEEFGVIMKALWSGLYKCISPRDFKVTIGKINESFSGQEQQDSQELLLF
LMDGLHEDLNKAANRKGYIEEENDDLDDQRAANQAWTKHKLLNESVIVALFQGQFKSTVQ
CLTCHRKSRTFETFMYLTLPLASTNKCSLQDCLKLFSKEEKMTDQNKVFCRHCKALRDSV
KKLEIWKVPPIILVHLKRFSYEGRWKQKLQTTVDFPLENLDLSQYVIGPRLGLKRYNLFG
VSNHYGGLDGGHYTAYCKNAMKQRWYKFDDHEVSEISTSTVKSSAAYIFFFSSL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtgtcccgcggggcgaaggacttgtacctctctactaacctgggggacctc
aacaagaaagctgaagtcaagcctgacaaaatcaacaccaggagctatgtccagagtgcc
tgcaagatcttcaaggctgcggaggagtgtcgtctggatggagacgaggagaaggcctat
gttctctacatgaaatacctgacggtttatgatctcatcaagaagaggcccgacttcaag
cagcaacaggagttcttcctgtccgtgctggggcccaccagctttaaaaaagccatagaa
gaagccgagaaactctctgaaagccttaaactcaggtacgaggaagtcgaggttcgtaaa
acgctcgaggagaaagagagacaagaggagaagaaaaggagggaggataagacggagaaa
gatggagggagggcatctccaaaagcagggaaagagatcaagaaggtaaaagagcagaag
gagttgaaaaatgtaacttcaaaagctgcggtatcagcaggagggatcacagcagagggg
ttgttcaagatgatgagggaccaggccattacggtcattgtgatggacgcccgctgcctc
cgagacttccaggactcacagatccaggtccccacccagactgtcatcagtgtcccagag
gaggctatcaaccctggcatcacagtgaaccagattgaggccaatctacccgatgcgtcc
agagagacgtggaagagacgggggttcgtagattacatcatcctactggactggttcagc
tctgttaccgacctcaaactgggaagcaccttacaaagcctcaaagatgctctcttcaag
tgggacagtaccactatcctgcgtagtgagcccatggttctggagggaggctatgagagc
tggctcctcttctaccccatgtacacatccaacgccaaagtcagaccgccccgaacacac
agctacaacaccctcccacagctgaacttcagctacccgtcactggaggagcccaaacct
ccaacccctcctccccccgagccggaccctgaaccccaggctccccctgcctcccttggt
agcgtacaggtgaacggtggccccctggaggatctgaccccctccacatggatggaggct
gacgccacagactcaccccacacagggttcactcaccctggagtagaccacagcaagaag
gaccctggagccggtccagggacccccagccagcctggagggacatccaagcacatccca
cagatcgaccgtaccaagaagccatcagtcagagtctcagacgggtctaaaacccccctg
gatgccctccccagggacctgcccccctcctcccagaatggcccgtctgtaccccaaccc
aaccgctcggtcaaaccggcttttgacccggcggtgccgctgacggacgaggaacgaggt
cagatccacacagagacggctgctctgatggagaaggcccggagagagcaggaacaacgc
aaacaggaacgccgcaccgaggaggagtggagagagagggaacgccgggagaaccaggag
aaggaaaatgaggagatggagaggaggaaagaggaagagaacaggactcaggagaggaag
agattggagagacacaaggcagaggagaaggagaacggggttagggaagagcgagagaag
agggggaaggaggatacgccgaccaacagtgcttctctggactcgccggctcccaaccgt
atcgtcacggagattaagccggtccaaacctctcctcgggtacccccagccggtcctaac
ctctccttggggacgcccagcctgtccaaacctctcctcggggacgcccagccggtccaa
acctctcctcggggacgcccagccggtccaaacctctcctcggggacgcccagccggtcc
aaacctctcctcggggacgcccagccggtccaaacctctcctcggggacgcccagccgct
gcgttgtgctgtgtccctcccaaaaaccaggctccctcccccctgaagcttagtggtgat
ctaaagaggagtcgtcagcctgggaggttacagcatagaacagttgaggactatgtcata
cccaagcgggagctcctaactagagccagaagtgaagagatggggaggagtgtaccaggc
ctgcctgttggctggatgaagttcttggatacggtaaccggtacctaccgttactaccat
tccccaaccaaccgggtgcaccgctacccccctgaggtcagcgtgccccagacgcccccc
tccacccctcctacggccaaacagaagcagcctcgccccgctgagccagaccagaccatg
gaccgtgaccaggagcagtccaaactgaaacgttcctattcttctccagacatcagccag
gacctgagggaggaggggctaaagaaggttaccgcccctataactgcagccacgcgccca
acctttaacagggagaccaaaccgtccactgctagcgtctacaccaaggtggagatcgcc
cgtccgtctgcggctaagatccgtaacctgaaccctgtgttcggcggtctgggcgcctcg
ctcaccggcctgcggaacctcgggaacacctgctacatgaactccatcctgcagtgtctc
tgcaacaccccggccatggtcgactacttcaacaagaacctctatcaggaggatatcaac
agggcaaatatcctgggtcaccgaggcgaggtggcagaggagtttggtgtgatcatgaag
gctctgtggtcaggcctgtataagtgtatcagcccccgcgactttaaggtcactataggg
aagatcaatgaatccttctctggccaggaacaacaggactcccaggagctgctgctcttc
cttatggacggactccacgaggacctcaacaaggctgctaaccgtaagggttacatagag
gaggagaatgacgatctggacgaccagcgggctgctaaccaggcctggaccaaacacaag
ctgctcaacgagtctgtcatcgtagcgctgttccagggtcagtttaagagcacagttcag
tgtctcacctgccacaggaagtcccgcaccttcgagacctttatgtacctgaccctgccg
ctggcctccaccaacaagtgttccctgcaggactgtctgaagctgttttctaaggaggag
aagatgaccgaccagaacaaggtgttctgtcgacactgtaaagctctcagagactccgtc
aagaaactggagatctggaaggtcccgcccatcatactggttcaccttaaacggttctca
tacgagggccgttggaaacagaagctgcagacgacagtagacttccctctggagaaccta
gacctcagtcagtatgtcatcggacccagactcggcctcaagagatacaacctgtttgga
gtgtctaaccattatggcggtctggatgggggtcactacacagcctactgtaagaacgcc
atgaaacagcgctggtacaagtttgacgaccacgaggtctccgaaatctccacctccacc
gtcaagtcctccgcagcgtacatcttcttcttctcctctctgtga
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