Oncorhynchus mykiss (rainbow trout): 110511854
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Entry
110511854 CDS
T07259
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110511854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110511854
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
RNases
110511854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
110511854
NCBI-ProteinID:
XP_036829211
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MEPHVCLKRKREPSPTPESSKTVKETDGNRVPESEHRSGSRTPRLSLPFDRLQEPVTLKD
LTELLQFAALGNTGGLKQPSWCRLHHQKNVSGVSVILLEGLSQAHFYRHYLHFKHLRTKY
TSRHSYTPSPGNMISEIFSSEVVNNSPADALGDQKSAQPEGGLQWHPVIRKFGLETRGLT
GYLLTQEEMIKKHFPVRGMPGSEGFVCTDSDDCVTDSSPLYGLDCEMCLTECGNELTRIS
LVDSRGSCVLDELVKPPNRILHYLTQFSGITRAMLQPITTTLREVQSMLKKVLPRDAVLV
GHSLENDLVALNLIHPHVIDTSLLYRREFGRRFKLKVLAETVLKKQIQTEERKGHDPTED
AQAALELAQYFIHTGPRQVVELYCEELWGGSPTMYQPPVNRATSTHNNNNSSLRFAEALK
SSGQSAVFIGKRADNTLDLANQQWHSSDREVLSSFKRGLDSHSFSVVQLSSFSDHLKAMI
STDQHYHTMSQRLREMCVVFAGPLPSDYSERAVRRLFSSCGTVRTVRLLNATQRVHAEVE
FELLEGAVLAVEMLNGTLLHSGHIVKVQRPVKESMLDLDVFLSSLQDDPLNANVIYAAGL
KANAKTAQFAAKVNGTGLNANAAAEVNETGLNANIAALPAKVNRARLHAKANHSGLLEKV
NGTFLNAKAKLAEANGPGLHSKAKFAKLAELSVEVNGTLLQVKTMLAEIAAEANVGARLH
AKTAGLCEEDLREAFGQYGTVQGVILPAKHSGKQKRRRHAFLKYDSPDTVDAVLSSPVEL
WDRKVSTRRALTPPHLCSWVTMTTTTGSDRETLDESSQETGREEQEVACVMRKLDRRVGK
LFRSLPDNTLSIVLLPGHNSSHGDGLCFLEVKQGSAALSDHAPDPMLPA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagccacacgtctgtctcaagagaaagagggaaccttccccaacaccagagagcagt
aaaacagtgaaagagacagatggtaacagagttccagagtctgagcaccgttccggttcc
cgaaccccgcgactctctctgccgtttgaccgtctccaggaaccggtcacgttgaaagat
ctgacggaactgcttcagtttgctgctctggggaacaccggggggctgaaacaacccagt
tggtgtcgcctccaccaccagaagaatgtgtcaggggtgagcgtgatccttctagaagga
ctgagccaggcccacttctacagacactacctgcactttaaacacctccgcaccaagtac
acctctagacacagttatactccatcacctggcaacatgatttcggagatatttagcagt
gaagttgtcaacaacagtcctgccgatgcgctaggagaccagaagagcgctcagccagag
ggaggtctgcagtggcacccagtgatcaggaagtttggtctggagaccagagggctgact
ggatacctcctcacccaggaggagatgatcaagaaacacttccctgtccgcggtatgcct
ggcagtgagggctttgtgtgtacagacagtgacgactgtgtgactgacagtagtcctctc
tatgggctggactgtgagatgtgtctgacagaatgtggcaatgagctgacacgcatctct
ctagtagacagcagagggagttgtgttctggacgagctggtcaaacctcccaaccgcatc
ctacactaccttacacagttctctggtatcacccgtgcaatgctgcagccaatcaccacc
accctgagagaagtccaatcaatgctcaagaaagtgttgccccgggacgcggtcctggtt
ggccactcccttgagaacgacctcgtggccctgaacctgatccacccccatgtgattgac
acctccctgctgtacaggagagagtttggacggaggtttaaactcaaggtgctggctgag
accgtgctcaagaagcagatccagacggaggagaggaagggtcatgaccccacagaggac
gcccaggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagtg
gagctgtattgtgaagagctgtggggtgggagtcctaccatgtaccagcctcctgtcaac
agagcaacatctacacacaacaacaacaacagctctctcaggttcgccgaggccctgaag
agttctggccaatcagccgtgtttatagggaagcgtgctgacaacaccctggatctggcc
aatcagcagtggcacagctcagacagagaggtcttgtcttcctttaaaagaggactagac
tctcactcgttcagcgttgtccagttgtcttccttctctgaccatctgaaggctatgatc
tctactgatcagcactaccacacgatgtctcagcgtctgagagagatgtgtgtggtgttt
gcagggccgttgcctagcgactactcagagagggctgtgaggaggctgttcagcagctgt
ggaacagtacgaactgtcaggctgttgaacgctactcagagggtgcatgcagaggtagag
tttgagctgctggagggagctgtgctggctgtcgagatgctcaacggaacactgctacac
agcggacacatcgtcaaggtccagagacctgtaaaggagtccatgttggatctggacgtc
tttctgagttccctgcaggatgacccgctaaatgctaacgtcatctacgccgcagggcta
aaggctaatgctaaaacagcacagtttgcagccaaagtcaatgggactgggctaaatgct
aatgcagcagctgaagtcaatgagactgggctaaatgctaacatagcagcactcccagct
aaggtcaatagagctaggctacatgctaaagcgaaccattcggggctcttagagaaagtc
aatggaacttttctaaatgctaaagctaagctagctgaagcgaatggacctgggctacat
tctaaagctaaatttgctaagctagcagagctctcagttgaagtcaatggcactctgctc
caagtgaaaactatgctagcagagatagcagccgaagccaatgttggagcgaggctccat
gctaagactgccggactctgtgaagaggacctccgcgaggccttcggacagtacggaacg
gttcagggcgtaattctacctgcaaagcactctggaaaacagaaacgtaggagacatgct
ttcttaaagtatgatagtcctgacactgtggacgcggtcctcagctcacctgtggaactc
tgggacaggaaggtgagcactcgcagagccctgactccgccccacctgtgctcctgggtt
actatgacgacgacgactgggtccgacagagaaacactggacgagtcgtcgcaggaaacc
ggaagagaggaacaggaagtggcgtgcgtgatgaggaagttggaccggcgcgtggggaag
ctgttcagatctctacctgacaacaccctcagcatcgtactgctgcctggtcacaacagt
tcccatggcgatggtctgtgtttcctggaggtcaaacaggggtcagcagcactcagtgac
cacgcccccgaccctatgctacctgcatag
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