Oncorhynchus mykiss (rainbow trout): 110511883
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Entry
110511883 CDS
T07259
Name
(RefSeq) polycomb protein eed
KO
K11462
polycomb protein EED
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110511883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110511883
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110511883
PRC2.2
110511883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
110511883
NCBI-ProteinID:
XP_036807244
UniProt:
A0A8L0DUG6
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Position
18:12275263..12281375
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AA seq
442 aa
AA seq
DB search
MRRENMSETPTEAGKEMPTKKQKLSSDENSNPDLSADENDDAVSVESGTNVERPDTPTNT
ANAPGRKSWGKGKWKSKKCKYSFKCVNSLREDHGQPLFGVQFNWHSKEGDPLVFATVGSN
RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTFDTSTSHPLLAVAGSRGIIRVINHIT
MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV
LSADFDLLGEKIMSCGMDHSLKLWTINSERMQKAIHGSYEYNPSKTNRPWVSQKIHFPDF
STRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDRIKPNESNVTILGRFDYS
QCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTILTLPRCTSAIRQTSFS
RDSSILIAVCDDASIWRWDRLR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggagaacatgtccgagacccctaccgaagcgggaaaggagatgccgacaaaa
aagcagaagctgagcagtgatgaaaacagtaatcccgatctctctgcagatgagaatgat
gatgctgtcagcgttgagagtgggaccaatgtggagcgtccagacacacccaccaacaca
gccaacgctccaggcaggaagagctggggcaagggcaagtggaaatcaaagaagtgcaaa
tattccttcaagtgcgtcaacagcctcagggaggaccatggccagccattatttggggtc
cagttcaactggcacagtaaagaaggagacccactggtgtttgctacagttgggagcaac
agagtaaccctgtacgagtgccattcccaaggagagatccgactcctgcagtcatacgtg
gatgccgatgcagatgagaacttctacacctgcgcctggacctttgacaccagtacaagc
catcccctcctggccgtggcggggtcacgtggcatcattcgggtgatcaaccacatcacc
atgcagtgtatcaagcactatgttggtcacgggaacgccatcaacgagctcaagttccac
cccagagaccccaacctcctgctatccgtcagcaaagaccacgcccttcgtctgtggaac
atccaaacagacacactggtggccatctttggaggtgtagagggacatagagatgaggtc
ctcagtgcagactttgacctgctaggtgagaagatcatgtcgtgtggaatggaccactct
ctgaagctctggacgatcaactcagagaggatgcagaaagccattcacgggtcctatgaa
tacaacccttccaagacaaacaggccatgggtctctcagaagatccacttccctgacttc
tctaccagagacatccacaggaattatgtggactgcgtacgctggctgggagatctgatt
ttatccaagtcgtgtgagaacgctattgtgtgttggaaaccagggaagatggaggacgat
attgaccgcatcaaaccaaacgagtccaacgtgacaatcctgggtcgcttcgactacagc
cagtgtgacatctggtacatgcgtttctccatggacttctggcagaagatgttggctctg
ggaaaccaagtggggaaactgtacgtgtgggaccttgaggtagaggacccccacaaagca
aagtgcaccatcctcaccctcccaagatgcacctctgccatcagacagaccagcttcagc
cgtgacagcagtatcctgattgcagtctgtgacgacgcctctatctggcgctgggaccgc
ctgcgatga
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