Oncorhynchus mykiss (rainbow trout): 110511898
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Entry
110511898 CDS
T07259
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04621
NOD-like receptor signaling pathway
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110511898
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110511898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110511898
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110511898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
NOD2_WH
AAA_16
NPHP3_N
AAA_18
AAA_22
ATPase
AAA_29
NTPase_1
AAA_30
Motif
Other DBs
NCBI-GeneID:
110511898
NCBI-ProteinID:
XP_021448271
Ensembl:
ENSOMYG00000038181
LinkDB
All DBs
Position
3:complement(17957248..17964878)
Genome browser
AA seq
954 aa
AA seq
DB search
MNIMGSSAEEVRAGLMGHVSTVQLFTLHRELLVSQVKSTQCILDNLLQSGFLCFEDTEII
QRSATKTEQVRKILELVQSKGEQACEYFLYIVHKVYDAYIDLQPWLKEINYKPPDFIRDI
PVKNTDPISRYCEKLRHELSRDTFFIASYAQQEETLLEELYTDTLMELLNDRNESLGHLE
GLEQLLGEQGVFNPQAETVLITGDAGVGKSILLQKLQRLWSNRELEQTDAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPEKVLFTFDGYDEIQADMNPGN
VPEVVSPEEKTHPLLLLINLLCGKLLSGSRKVLTARTGTEVQSRVIRKRVALRGFSPAHL
QTYTNLHFKEQEHRDLVSVQLDANPHLCGLCSIPLFCWIVFKSFKHLHSVYDDFELPEAC
VTLTNIFLLLSEVFFSRGAAPPPGLLTRNTRCPADTFRAGLRPLTAFSKLSLLGTERGGF
VFDKEEVTSCGLTEDDFQVGFLRPVSRYDACGNPSTFEFLHLTLQSFLAAFSLVLDEQAS
VGNILKFFTECSRRDNTSCLSCVFPCIGGSSKPRGKDPFKTNEHLQYANLFLCGLLSKAN
AGLLEHMVPPALLKRKRAVLKSYLSTSVRSHLRGLPLHSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVSSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSIEVLAEELIKYRVVEVLGLYNNHITDIGAKLIAHI
IEECPKLRVVKVGSNKFTSVGGRYLASAIQKSTSIFDVGMWENSIGDEGARAFAEVLRNH
PSLTNLCLSANGITSEGGRSLAKALKDNRRLRIFWLVQNELSDDVAPDLAELIRSNTGLS
HLWLINNQLTVDGIRQLSEALSHNTSLKEICLKGNCLSEEEEKLFEAEGRLHFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatgggctccagtgccgaagaagtccgtgctggactaatgggccatgtgtcc
actgtccaactgttcaccttgcaccgtgagctactggtctcccaggtgaagagcacgcag
tgcattctggataacctcctacaaagtggctttctgtgttttgaggatacagaaatcatc
cagcgctcagccaccaagacagaacaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattgtccacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactacaagccaccagacttcatacgggacata
ccagtgaagaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgagc
cgagacacattcttcattgcatcctacgcccagcaagaagaaaccctgctggaggagctc
tatacagacaccctgatggagctcctgaatgaccgcaatgagagcctgggccacctggag
ggtctggagcagctcctgggagagcagggtgtctttaacccacaggcagagacggtgctc
atcacgggggatgctggggtgggcaagtccatcctcctccagaagctccagaggctgtgg
tccaatagggagctggaacagacagacgccatgttcttcttcaagttccgctgtaggatg
ttcagcacattcaaggagacagacgagatctcactcagggacctgcttttcaaatacaac
tgctaccccgaccaagatgcggacaatgaggtgttcagctacatcctccgcttccccgaa
aaggttctctttacatttgacggctatgatgagatccaggctgatatgaacccggggaac
gtgcctgaggtggtttctccagaggagaagactcaccctcttctgctgctcattaacctg
ctctgtgggaagctgctcagtggttcccggaaggtccttactgctcggacaggcactgag
gtccagagcagggtgatccggaagagggtggcgctgcgtgggttctctccggcccacctt
cagacctacaccaacctacacttcaaagagcaggagcacagggacctggtctcagtccag
ctggatgccaacccccacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcactcagtctacgatgactttgagttgccagaggcttgc
gtgaccctcactaacatattccttctgctttctgaagtcttcttcagccggggggccgct
cccccaccgggcctcctgacgagaaacaccaggtgccccgctgataccttcagggcaggg
ttgaggccactgacagccttctccaagctgtctctgctgggcacggagagaggaggcttt
gtgttcgacaaggaggaggtgacctcctgtggcctgactgaggacgactttcaggtgggt
ttcctccgaccggtcagccgctacgatgcctgtggaaacccttctacctttgagttcctt
catctcaccctacagtccttcttggctgcattctccctggttctggatgaacaggccagc
gtaggcaacatcctcaagttctttacagagtgcagcaggagggacaacacatcttgttta
tcgtgtgtcttcccctgcatcggtggctcctccaaacccaggggaaaggacccgttcaag
accaatgagcatctccagtacgccaacctcttcctgtgtggactgctgtctaaggccaat
gccggcctgctggagcacatggttcctccagcactgctgaagaggaagcgggcggtcctc
aagtcctacctgtccaccagcgtgaggtcccacctccgcggtctgccactccacagcaca
gagcaggagggcagcaaggtgcatgtcctgcccaacttcctgtggatgctgcgctgcatc
ttcgagacaggaagtaaagaggtggcccagctgactgcgaagggaatcacagctgactac
atcaagctgggctactgtaatgtgtcctctggcgactgcagtgccctcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaaaatgaccgtggtgaggttgtgtgtcaatcag
atctcagacagcagcattgaagtactggctgaggagcttatcaaatacagagtggtggag
gttttgggactttacaataatcacatcacggacattggagccaagctaattgctcatatc
attgaggaatgtcctaagttaagagtcgtcaaggttggcagcaacaagttcaccagtgtg
ggtggcaggtatctggccagtgccattcagaagagcacatctatctttgacgtgggaatg
tgggagaacagcattggtgatgaaggagcaagagcattcgcagaggtcctgaggaatcac
ccaagtcttaccaacctctgtctctcagccaatggtatcacttcagaaggtgggcggagc
ttggccaaagcactgaaagacaatagaaggctccgaattttctggttggtgcaaaacgag
ttgtcagatgatgtagcaccagacctggcagagctgatcagatccaacacgggtctctct
cacctctggttaatcaataatcagctgacagtggatggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatctgtttgaaaggaaactgtctttctgaagag
gaagagaagctgtttgaggctgagggaaggctacacttccactga
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