Oncorhynchus mykiss (rainbow trout): 110512409
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Entry
110512409 CDS
T07259
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110512409
04121 Ubiquitin system [BR:
omy04121
]
110512409
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Other 90S particles
110512409
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110512409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110512409
NCBI-ProteinID:
XP_021448492
Ensembl:
ENSOMYG00000002416
LinkDB
All DBs
Position
3:complement(19655283..19667465)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVPREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLSTMLSGSCDGELKVWNLTKRECVRTLQAHEGFVRGMVVRFC
GTSFFTVGDDKTIKQWKMETPSYGEEEEPLNTILGKSVFTSIDHHQKEGVFVTCGQQVDI
WDEQRSSPIRSFSWGVDSFSCVRFNPVETELLASCASDRSIVLYDMREATPLKKVIMNMR
SNTLCWNPMEAYNFTCSNEDYNLYTYDMRYLDKPFTVHMDHVSAVLDVDYSPTGKEFVSA
SFDKTIRIFPKDSGHSREVYHTKRMQHVISIKWSSDNKYILSASDEMNIRLWKANAAEKL
GLLAPREKAAVNYSQKLKEKFQHHPQIRRISRHRHLPKSIYGQSKELRVMKEARRRKERN
VRKHSKPGSMPVVTEKEKHVVTVVN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctctccaggaatccggacgactatgtccgtgagacgaagttggat
atccagcgtgtaccaagaaattacgacccgtccctccatccgttcgaggtgccaagagaa
tacacccgtgccctgaatgccaccaagctggagcgcgtgttcgccaagccgttcctggct
tctctggacggccacagggatggggtgaactgcatggccaagcaccccaagagcctctcc
acaatgctgtccggctcctgcgatggagagctgaaggtgtggaatctaaccaaacgtgag
tgtgttcgtacactccaggcccatgaaggctttgtcagggggatggtcgtccgcttctgt
ggcacctccttctttacggttggtgatgacaagactataaaacagtggaagatggagact
cccagctacggagaggaagaggaacctctcaatactattcttggaaagtctgtgttcacc
agcatcgaccaccaccagaaggagggtgtgtttgtgacgtgtggccagcaggtggatatc
tgggatgagcaacgcagcagccccatccgctccttctcctggggcgtggacagtttcagc
tgcgtccgcttcaaccctgtagagactgaacttctagcaagttgtgcctctgacagaagt
attgtgctgtatgacatgagggaagcgacacctcttaaaaaggtaatcatgaatatgagg
agcaacactttgtgctggaatcccatggaagcctataactttacctgctctaatgaagat
tacaatctgtatacatatgatatgaggtacctggacaagcctttcaccgtccacatggac
catgtctcagccgtgctggatgtagactactctccaactggtaaggagtttgtctcggcc
agctttgacaagaccatccgcatcttccccaaagacagtggccacagcagggaggtgtac
cacaccaagcgcatgcagcacgtcatctccataaagtggtcgtcagacaacaagtacatc
ctgagtgcttcagatgagatgaacatccgactgtggaaggccaacgctgctgagaagttg
ggattgctggctcctagggagaaggcagctgtgaactacagccagaagctgaaggagaag
ttccagcaccaccctcagatccgccgcatctcgcgccaccgccacctgccaaagtccatc
tacggccagagcaaggagctgcgtgtcatgaaggaggctcgccgcaggaaggagaggaac
gtacgcaagcacagcaagcctggctccatgcccgtggtgacagagaaagagaaacatgtg
gtcaccgttgtgaactag
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integrated database retrieval system
