Oncorhynchus mykiss (rainbow trout): 110512493
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Entry
110512493 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110512493
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110512493
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
U-box type E3
110512493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Merozoite_SPAM
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110512493
NCBI-ProteinID:
XP_036828016
LinkDB
All DBs
Position
Unknown
AA seq
2255 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLNITLADLKRQIMGRERLKAVDCGLQITNAQTKEEYKDN
EALISKNSSVIIRRIPIGGVKASSKMYNIERFSEQNHFPVQNLPVGSSKGDRSSEHCHFS
IGSSKGIDDHASSISLAQLSKTANLAEANASEDDKIRAMMSQSNHDYDPIHYVKKLTGPP
PANYTCYRCGKNGHHIRNCPTNGKEKGFEPPQRIKKSTGIPRSFMKEVDDPSIKGAMLTN
TGHYAIPTIDAEAYALGKKERPPFVPRDQSSSEEDEDPVPDELLCLLCKDLMTDAVVIPC
CGNSYCDDCIRTSLLESEEHVCPTCSQSNVSPDALIANKFLRQAVNNFKNETGYTKRMMT
RVAQPPVVPTPPLQPQSRPQCPLQPIRSQQDPLMPRPPALDTPPLAQQQVGPPLRVGNHN
NSSHMAAGSSYNSTGPSSQHPTNHNNTLMLKEPESGGVQSVVVSADPPLATAPMTKEYHV
PVMSQPQSDSHSLQRTGPPPRLSEGPAHWDRYSPSGRGRNHSDRAPPSQPPPTNVPPLLY
NPPSIFSSPLPHPPGVIPPHYPPPHFPPGQQPPSSYSLPPPGYPPTPGVTNPPWAPPNTQ
PPLAGKPIPSSSFLSKDEFYRQQKRLKDNSDCRYGNREKSKLDEFTNDFAKELLEYRKIQ
KERRRSYSRSRSSYSSSSYSKSRSRSRSYSRSSSRSRSRSRSRSRSRSRSYSRSSPYSRR
HGRPRGYRSRSRGYRRSRSPPPFRDGGGAGRGRGRGRGYRSRSRSPGQGGYRTHTPPPPS
SRKPAAAGAPPEGERKYPGRTRERDWEPAVYERGPEHKDPYERERYREWEKEYREWYEKY
FKNYNSHNPPPNNPPAYRGRPPLGFAPAPVAPPAGRDRDPYNPPPPSDFYPSPRHRLDRG
SSPFSRGRRRGEGFPPPPSHPSPRGRNQPMTYQEKCAEQFGTLPLSRSANQDHQTPLKVA
KGDRDPSSSVASPAVPVTSDLKEQKHRKRKKRKTEHGGGESFSASDSTDDARKEEKEEKK
KKRTGSTPVGSSSHDDSTPVRDEPIDSDASDSVPDKADRWTRDSKEEEVRRKSDRVYKRG
PDSSVARKDSSSKSWKTVRETDRDQTGTARDQTGTDGLAYQKTSLTEPSAKRVKDESIPF
QPDSCTSPQREMELQHPAPLASAPKLPPPKPHADQLDIIRINPDPFKPVRTDPDQFKPVR
TDPDQFKPVRTDPNQFKPVRTDPDQFKPVRTDPDQFKPFRSDLDHSRPAKEEQRGKRDPG
FRQDRGSGREDKPRREADIRVGREQERDPGKAPDTKSEKRRRRKEEEEKRKTRKEERSMS
DKEMEVPRIKSPGVELTETVKPCNLKRDVEEERERASVRPPMESGTKGGEPQRKIKTNRE
EGRRAGKLAGVAGTEAANQSSYIKGSVERSKAKRNRKVLVSDGPGTTVDYTSPPGGSSPV
CGDGSEGRAEQRKTVVKTLEEYTNDSSAPADGHIVLIQVPRSKWEKEDYESEEEEGGGVR
VQLRPLLTPSLPFPPGPHITVTTETEAGRRKERDCTFPKPERTMSPSSGRDREDGLQGGK
HSGDPIPSEKDGETERKRDQLKEKEQERERDNERDRERAKEREREREHSRASDKDMDRPR
KIPSSSQRPERRERGGERTGERGIDHVSEKSSSQRPERREREGERTGERGIDHVSEKSSS
QRPERERRERGGERTVERGSDHISEKSSSQRPERERRERGGERTGERGSDHSSEKSSSSS
SHSYSRDRKPFSSSRDHKATSDPRAREHRDHKHKDHNDQNSSTVDRNTNSTDRRPLDDQE
TTREHRDRLEPKHKDHRELGSASPVSKRAPPPSDPSSSSTQRSQGSSEPTGPSESSPGRD
TTQDRYPSPQVSITVENQPGRGKAEGEEPRVERSSAGRQSQQASLGNLEKEMSGGKPHQH
PASLLQPPRTDNRAGVPRAVRERERKKERERQMQKMREKMEKERDEEGDKEVDREKERER
GGVDREERERGVDREKERERGVDREKERERGVSREKERGRENPKVRPPPSAPSSRPPPSV
PSSRSPPSVPSSRSPPSVPSSRPPPSVPSSRTPPPVPSSRTPPSVPSSRPPPDLVRETDE
AFEPDYSEGEISEGEEEGERAVEGERAVEGERAVEGERAVEGERAVEGERVEGERAVEGE
SGRSRSSSASSVGSLGNKKDKKKKDRKEKKKQKKKKKKKDRKQRRQGSLDAEEGEITGLK
HKHKKKNKEKEDNEREEEEVEEERRGEDQMASVAL
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtacattataaattctcatctaaactcaactacgacacggtcactttcgat
ggcctgaacatcactctggccgacctgaaaagacagatcatgggtcgagagagactcaaa
gctgtcgactgcggcctacaaatcaccaacgcacaaactaaagaagaatacaaagacaac
gaggccctgatatccaagaactcctctgtcatcatcagaagaatacccatcggaggagtc
aaggcttcaagcaagatgtataacattgagcgtttttcagaacagaatcacttccccgtt
cagaacctccccgtcggatcctccaaaggagatcgttcttcagaacactgtcacttttcc
attggatcctccaaaggaattgatgatcatgcttcatcaatatcactggcccaactttca
aagacggctaacctggcggaggccaacgcatcggaggacgacaagatcagagccatgatg
tcacagtccaatcacgactacgaccccatacattatgtgaagaagttgaccggtccccct
ccagccaactacacctgttatcgctgtggcaagaacggacatcacatcaggaactgtcct
actaacgggaaggagaaagggtttgagccgccccagaggatcaagaagagtaccggcatc
ccccgttccttcatgaaggaagtggacgacccgtctataaagggagccatgttgaccaac
accggccactacgccatccctacgatagacgctgaggcctacgctttaggtaagaaggag
aggcctccgttcgtccccagggaccagtccagttccgaggaggacgaggatccagtccct
gatgagctcctctgtctgctctgtaaagacctgatgactgacgctgtggtcattccctgc
tgtggcaactcctactgcgacgactgtatccgtacgtctctcctggagtcagaggaacat
gtgtgtcccacctgtagccaatcgaatgtctcccctgatgctctcatagccaataagttc
ctgcgccaggcggtaaataactttaagaatgagaccggttacaccaaacgcatgatgacg
agagtagcccagccccccgtcgtccctacccctcctcttcagcctcagtcccgccctcag
tgcccgctccagcctatcaggagccagcaggaccctcttatgccccgccctccagcctta
gacacgccaccattggctcagcagcaggttggcccgcccctcagagtcgggaaccataat
aactcctcccacatggctgctggctcctcctataactcaacgggcccctcctcccagcac
ccaaccaatcacaacaacacgcttatgctaaaagagccagagagtggaggagttcagtct
gtggtggtctcagccgacccccctctagccactgcccccatgaccaaggaataccatgtt
ccagtgatgagccaaccccagtctgacagtcactccctgcagaggacaggtcctcctccc
agactttctgaaggaccagcccattgggacaggtacagcccctccggtcgtggcaggaac
catagcgaccgcgcccctccctcccagcctccgcccaccaacgtgccaccccttctctac
aaccctccctccattttctcctcccctcttccccatcccccaggtgtcatacccccccac
tacccccctccccacttccccccggggcaacagcccccctccagctactccctgccccct
cctggatacccccctaccccaggagtcaccaaccccccctgggcgccccccaacacccag
ccccccctcgccgggaagccaatcccctcctcttccttcctgtccaaggatgagttctac
agacaacagaagaggctgaaggataactccgactgtcgctacggtaaccgggaaaagtcc
aagctggatgagttcaccaacgactttgccaaggagctgctggagtacagaaagatccag
aaggagaggagacgctcttattccaggtctaggtcgtcctacagtagctcatcctactcc
aaatcccgttcccgttctcgttcgtactcccgttcctccagtcgttccagatcccgttcc
agatcccgttccagatcccgttccaggtcttactcccgctcctctccgtactcccgccgc
cacggacgacctcgcggctaccgctcccgttcccgtggctaccgccgatcacgctcgccg
ccgcctttcagggacggtggaggggcgggacgggggagagggcggggacgaggttaccgg
tcgcgctctagatcacctggccaaggggggtaccggacccacactcctccacccccaagc
tcccggaagcctgccgctgctggagcgccaccggagggtgagaggaagtacccgggccgg
acccgggagagggattgggagccggcagtgtacgaacggggtccagagcacaaagaccca
tacgagagggagaggtaccgggagtgggagaaggagtacagagaatggtatgagaaatac
ttcaaaaactacaactcccacaaccctcctcccaataacccccccgcctacaggggccga
cccccccttggtttcgcccccgcccctgtggcacccccagccggacgagacagagacccc
tacaaccctcctccaccctctgacttctacccctccccccgacaccgcctggaccgtgga
tcctcccccttcagtcgagggaggaggcgaggtgagggctttccccctcccccctcacac
ccctcccccaggggcaggaaccagccaatgacttaccaggagaagtgtgctgagcagttt
ggaactctgccgctgtcccggtcagccaatcaggatcatcagacgccactgaaggtcgca
aagggtgacagagatccgtcgtcgagcgtcgcctctcccgcggtccctgtgacctccgac
ctgaaagagcagaagcacaggaagaggaagaagaggaagactgagcatgggggaggggag
tccttcagtgcttctgactctacggacgacgctcggaaagaagagaaggaggagaagaag
aagaagagaaccgggagtactcccgttggttcgtcaagccatgacgactccaccccagta
cgggacgagccaatagacagcgacgcctcagactcagtcccggacaaagctgataggtgg
accagggacagtaaggaggaggaagtgaggagaaagagtgacagagtttataaacgcgga
ccggactccagcgtagcgaggaaagactcatcgtccaagagctggaagaccgttagagag
acagaccgggatcagaccggtacagcccgggatcagaccggtacagacggtttagcctac
cagaagacttctctaacagaaccgtcagccaaacgggtcaaagatgaatctattcccttt
caaccagactcttgcacctccccccagagagagatggaactccaacaccctgcaccccta
gcatcagctcccaaactacctcctcctaaaccccacgcagaccagctagacataatcaga
atcaacccagacccattcaaaccggttagaaccgacccagaccagtttaaacctgtcaga
accgacccagaccagtttaaacctgtcagaactgacccaaaccagtttaaacctgtcaga
accgacccagaccagtttaaaccggttagaaccgacccggatcagtttaaaccgttcaga
tccgacctggaccattccagaccagccaaggaggagcagagagggaagagagatccaggg
tttcggcaggacaggggctcagggagagaggacaagcccaggagagaggctgacatcagg
gtgggtagagaacaggagagagaccctggcaaagctccagacaccaagtctgagaagagg
aggaggaggaaggaggaggaggagaagaggaagacgagaaaggaggagaggagtatgtct
gataaggagatggaggtgccccgaatcaaatcacccggagtggagctcaccgagaccgta
aaaccctgcaacctcaaacgtgacgtcgaggaggagagggagagggcttccgtaaggcct
ccgatggagagcgggacgaaaggaggagaacctcagaggaagattaagaccaacagagaa
gaagggaggagggccggcaagcttgcgggcgtggccggaacagaggcagccaatcagagc
agctatataaagggaagcgtggagaggagcaaagccaagaggaaccgtaaggtcctagtg
tccgatggtccgggaaccaccgtggactacaccagtcccccagggggcagtagtcctgtg
tgtggcgatggatcagagggcagagcagagcagaggaagactgtcgttaaaacactggag
gaatacaccaatgacagctcggcacctgctgacggacacatagtactcatacaggtccct
cgctccaagtgggagaaggaggactacgaatcagaggaagaggaaggaggaggggtcagg
gttcaactccgccccttgctcaccccctccctccctttcccccctggaccccacatcacc
gtgacgacggagacggaggcagggcgaaggaaagagagggactgtacctttcccaagcca
gagagaactatgtccccctctagtggcagagacagagaagacggcctgcagggtggaaaa
cactccggagaccccatcccttctgagaaagacggagagacggagagaaagagagatcag
ttaaaggaaaaggagcaggagagggaaagagataacgaacgggacagagagcgggcgaaa
gagagagaaagagagagggaacacagccgtgcttctgacaaagatatggacagaccgaga
aagattccctcttcctctcagcggccggagaggagagagagaggaggagagaggactggg
gagagagggatcgaccacgtcagtgagaagagctcctctcagcggccggagaggagagag
agagaaggagagaggactggggaaagagggatcgaccacgtcagtgagaagagctcctct
cagcggccggagcgagagagaagagagagaggaggagagaggactgtggagagagggagc
gaccatatcagtgagaagagctcctctcagcggccggagcgagagagaagagagagagga
ggagagaggactggggagagagggagcgaccacagcagcgaaaagagctcctcttcctcc
tcacactcttactcacgagatcgtaaacctttttcttcttccagggaccacaaagcgacc
tctgaccccagagccagggagcacagagaccacaaacataaagaccacaacgaccagaac
tcctccaccgttgaccgtaacaccaactctactgaccgtagaccactagacgaccaggag
accaccagagaacacagagaccgcctcgaacccaaacacaaagaccacagagagctaggc
agtgcctctcccgtctccaagagagccccacctccatcggacccctcctcctccagcacc
cagagatctcagggaagctctgagcccaccggacctagcgaaagcagccctggcagggac
acgacgcaggacagatacccctctcctcaggtctccatcaccgtggagaaccagcccggg
agggggaaggctgagggagaagagcccagagtggagcgctcctcagcggggagacagagc
caacaggccagcctaggaaacctagagaaggagatgagtggtggaaagccccaccaacac
ccagcctcactcctacagccccccaggactgacaacagggcaggggtgccccgagctgtc
agagagagagagagaaagaaagagagagagaggcagatgcaaaagatgagggagaagatg
gagaaggagagagatgaggagggagataaagaggtcgatagggagaaggagagagagaga
ggaggggtcgatagggaggagagagagagaggtgtcgatagggagaaggagagagagaga
ggggtcgatagggagaaggagagagagaggggggtgagtagggagaaggagagagggagg
gagaaccctaaagtcagaccccctccctcggccccttcttccagacctcctccctcggtc
ccttcttccagatctcctccctcggtcccttcttccagatctcctccctcggtcccttct
tccagacctcctccctcggtcccttcttccagaactcctcccccggtcccttcttccaga
actcctccctcggttccttcttccagacctcctcctgacctggtcagagagactgatgag
gccttcgaacctgactacagcgagggagagatctcagagggggaggaggaaggagagaga
gcggtggagggggagagagcggtggagggagagagagcggtggagggagagagagcggtg
gagggagagagagcggtggagggagagagagtggagggagagagagcggtggagggagag
agcggcagaagtcgtagcagcagcgccagctctgtcggtagcctgggcaacaagaaagac
aagaagaaaaaagatagaaaagagaagaagaaacagaagaagaagaagaagaagaaggat
agaaagcagaggagacaggggagcctggacgctgaggagggagagatcacgggactgaaa
cacaaacacaagaagaagaacaaggagaaagaggacaatgagagagaagaagaagaggtg
gaggaggagagaagaggagaagaccaaatggctagcgtagccttatga
DBGET
integrated database retrieval system
