KEGG   Oncorhynchus mykiss (rainbow trout): 110512494
Entry
110512494         CDS       T07259                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110512494
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    110512494
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT FHA PTCB-BRCT
Other DBs
NCBI-GeneID: 110512494
NCBI-ProteinID: XP_036827182
LinkDB
Position
3:19802986..19819461
AA seq 2093 aa
MEATQLIDDSILEESEEEDGAMRKEKRGEPLAKLRVLKNEHISETELPLYQGENVLGRNP
NSCSLPLVAPSVSKQHTVISISMFRGNRCRGNIAGMETEALVWDLGSMNGTRKGRTKLTP
HVRYALTEGECVVIADIPCQYVSVDQRGGQGHMQNPTNAHSGRGRRTGPDRKAQFRGSPS
GQGLGRETGTPKTERRTEGRGVNGEMGAPLSTELGGKGKTRAIPLSLEQTPTKPERTLVP
ESESDGDREGRRDKRGKYFVSDSDSHVSSPTCSTFLSPTNKVIPESEDDKPITPSAKNRP
KKVVSFSEEESDMDGPRQQPRRRRAQVIVDDSEEEEEEGKEGTEALGEKEPGKRTRGKEE
VSVLNQVSQAERDGPMVSTEDTFNMDSDTDVEGEEEMGLSAPVNAVKPPAATEPPTTDSD
PGQIHMDSDTDVEEGDTMDSDSKLMLTAADVERKPVDSVPVVQPTEIHLDSDTDVDDDDV
VVSDSATNVTSFISDPAEKPDDPAPAVPPVEFHPDTDTDVEEEDTDTHSKTVPESDSSGI
RTGIAGPQKILLDSDTDEENNPFTPPASSRTAELLNPPTSVGPAAAAPLEIRSDSDTDLE
EDATQTMNLPPNVATVTEDAGLASRQAVLPSPTTTTIERLEPKPPRCRPPAGMVPESDLS
EPSDFRVDSDTEKDGPGEAGQGQTACRLREGAVGPGLLPLGGSPGPHQKCSTPLASSVQE
EMETQAFFSPSDSFRHPALPPVLRPTAALSCSASDSQEDDDFVVAETQSFVLEAQNQGHQ
SSLPVEPTLDATQPYGLEPSLGEDREEQPSRGSFRLGLSDSRDLSLQARDQASESPQAFS
SPDRDSDLEATQTYGSGGGSEEPGLGQRSAVFGRNRQVDFVLEATQAYAAQPCSDTEEED
EEETPTTSNVATTETLPMSAYEEEEEGLVGAMPSTPVRRGRSGGAREREEEEQETQTGDV
LINQYLSTAQTLDMVQESDDEEEAKPDSPRGRGQSQEQTVDKEETQTVCSYLSTAETQPM
FTAAAAEDDDNEEEELKPPSPRRRGRSQRGRLEEEETQPSEFLTSSHISTAETQPMGTCD
TEEEEEDTKDKGRAQRGRGKESEAGTSGVSSRGRRGARGGEEEEESAEPPKTQTRGKGKA
VNTAGGRGRRGKGKAVNTAGGRGSRGKVLSEEGESEKEEEEVEVIEQGRRGRKSVKQQKE
GEKERLEREQREEEEGIEKERQEQAEKERLQKEKVESERVMKEQQDRERMEQELKEQDER
LERERVEREETERMEREKREETGRMEREKREQEERERFERERKEREEQERLEREKERLER
EENERIERKKREERKRLEREKERLEREEKQRIEREERTDREERKRLEKNKEEKERLDRER
GKEKEERNLKEKLEREKEREKREAEEKEKEIKERQAKEQGEKQTKKDNENEPKTSTRGHR
AITRRTVMVPPTTEPQPEPDILSSQPEPVPESITRSRSNSVSSERSTSNIGTQGSRGRGG
RKTTSTTESAPGPDNPTRNSTRRRTLVGTVVAPPTAVEVTVQDILSSEQFVARRTRSRSS
STNSHSSLNSEVSTGITASVSSQSKGRGGGRRKTGTESVSPSNRQSEQPPALKPTARGRR
SQKVEDYGPHPEINEKADSQEAGGTTRGQKKTDKTNEPDPVVADEETTPAQVTEDSPTPR
GNGRGRGRGGQKDNTPESTTTTAGGETQSEEGVGSKTGGRGKGRKRGLEEEEESSEFKVP
RGKAKVQRGGRRRAAEEEGEKEEKPASTPAKRGRASTAQVKKIAEEEKSMERQSEKMEEA
GTVQRKVRGRQLTVQIKKEEESVLDSNSVVPQTPTGKGRGKRRAPVESSPFAKTPRSSSA
SPLSSLSSPGTLGRARASTQSYKVLFTGVVDEEGGKVVSRLGGSLAKGVADMTHLVTDRI
RRTVKFLCAVARGVPVVTTDWLDKCGKVGSFLPTDRYLVKDREQENKFSFCLEESLRTAS
TQPLLQGFEVHVTRSVLPEPAQMKDIIVCSGARFLSKMPSTQKAQARTLVISCGEDWSLC
APALSASLPVLSAEFLLTGILQQRVDLVTHVLSAPKPRAQPGAKGQASGRKRT
NT seq 6282 nt   +upstreamnt  +downstreamnt
atggaggcaacacagctgatcgatgactcaatattggaagagtcagaggaggaggatgga
gcgatgcgaaaagagaagcgaggagagccactggcaaaactcagggtgttaaaaaatgaa
cacatctcagagactgagttgcctctctaccagggagagaatgtgttgggtcgaaatcca
aactcctgctcccttcccctcgtggcaccttctgtatccaagcaacacaccgtcatctcc
atctcaatgtttcgcggcaaccgttgtcgtggcaacattgccggcatggagacagaggct
ttagtgtgggacctggggagcatgaatgggacaaggaagggccggaccaaactgacccct
cacgtccgctacgctctgactgagggagagtgtgtggtaatagctgacatcccctgccag
tatgtctctgtggaccagagggggggacaggggcacatgcagaacccgaccaacgcacac
tctggaaggggaaggaggacagggccagacaggaaggcccagttcagaggaagccctagc
ggccaaggtctgggacgagagactggcacaccgaagactgagagacggactgagggtaga
ggagtcaatggagagatgggggcaccattgtcgactgagctgggtggaaaaggtaaaact
cgggccatacccctgtcgttggaacaaacccccacaaagcctgagaggacactggtgcct
gaatctgagtctgacggagatcgagagggacggagagacaaacggggaaagtactttgtc
tctgattctgactcccatgtgtccagtcccacctgttctacattcctcagtcctacaaac
aaagtcattccagagagtgaggacgacaaacccattactccctctgctaaaaacagaccc
aagaaagtagtgagcttcagtgaggaggagagcgacatggatggaccgagacagcagccc
aggagaagaagagcacaagtgatagtggacgacagcgaagaagaggaggaggaggggaag
gaaggcacagaggcactaggagagaaggaacctgggaaaaggacaagaggaaaggaggaa
gtgtcagtgctgaaccaggtcagtcaagctgagagagatggaccaatggtgtctacagag
gacacgtttaacatggacagtgacacagacgtagagggagaggaggagatggggctgtct
gcacctgtaaacgctgttaagccaccagccgcaacagaacctcctactacagactctgac
ccaggccagatccacatggacagtgatactgatgtagaggaaggggatactatggacagt
gactctaagttaatgctaactgctgccgatgtggagaggaaaccagtagattctgtccca
gtggtgcagccaacagagatccacctggacagtgatacagacgtggatgatgatgatgtt
gttgtgtcagacagtgctaccaatgttacctccttcatatccgatccggctgagaaacca
gacgaccctgcccctgcagtgccacccgtagaattccacccagacactgacacagatgtg
gaagaggaggacacagacacacattccaaaacagttccagaatcagattctagtgggatc
agaacagggattgctggtccccagaagatccttttggacagtgatactgatgaagaaaac
aacccgtttacccctccggccagcagcagaacagcggagctccttaatccacccaccagt
gtaggacctgcagctgctgctcctctggagatcaggtctgacagcgacactgacttagag
gaagacgccacacagaccatgaaccttcctcctaatgttgccacggtaacggaagacgca
gggttagcatctcgacaggccgtgcttccatcacccacaacaacgacaatcgagaggttg
gagcccaaacccccccggtgtcggcccccagcagggatggtcccggagtcggacctcagt
gagcccagtgacttcagggtggacagtgatacggagaaggatggaccaggggaggcaggc
cagggacagactgcatgtcggctcagagagggggcagttggccccgggctgctccccctg
gggggttcccctggccctcatcagaagtgctccacccctttggcatcgtcagtacaggag
gagatggagactcaggccttcttcagtccctctgactccttcagacacccagctctccct
cctgtgctgaggcctacagcagcattgtcctgctctgcatcagacagccaggaggacgat
gactttgtggtggccgagacccagtcatttgtgttggaggcccagaaccagggccatcag
agcagccttccagtggaaccaaccctggatgctacgcagccctacggtctggagccttcc
ttgggggaggaccgggaggagcagcccagccgaggctccttccgactgggtctatcagac
agcagggacctcagcctccaggccagggaccaggcctcagagagcccccaggctttcagc
tccccagatagggattctgacctggaggccacccagacctatggatctggaggggggagc
gaggagcctggcctgggccagaggtctgcggtgttcgggaggaacaggcaggtggacttt
gtcctggaggcaacacaggcttatgctgcccagccttgcagtgacacagaggaggaagat
gaagaggagacccccaccacgtctaatgttgctacgactgaaaccctgcccatgtctgcc
tatgaggaagaggaggaaggtttggttggggccatgccctcaaccccagtaaggagaggg
agatctggaggagcgagggagagagaggaagaggagcaggagacccagactggtgacgtg
ctgatcaaccaatacctctccacagctcaaactctggacatggtccaggagagtgatgat
gaggaagaagccaaaccagactcacccagaggaagaggacagtcccaagaacagacagta
gacaaggaagagacacagactgtctgctcctacctctccactgctgaaacccagcccatg
tttactgctgctgctgctgaggatgatgacaatgaggaggaagaactcaaacctccatca
cccagaaggaggggaaggtcccagagagggagattagaagaggaggagacacaacctagt
gagttcctcaccagctcccacatctccaccgctgaaactcagcctatgggtacttgtgac
actgaggaagaggaggaggacaccaaagataaaggacgggctcagagagggcgagggaaa
gagtcggaggctgggacaagcggtgtcagcagtagaggtagaagaggagctagaggagga
gaggaagaagaggagagcgctgagcctccaaagacacagacaagagggaaggggaaggct
gtgaacaccgcaggaggcagagggaggagagggaaggggaaggctgtgaacaccgcagga
ggcagagggagtagagggaaggtgctgtctgaggagggagagagtgagaaagaagaagaa
gaggtggaggtgattgagcaagggagaagaggaagaaagagtgtgaaacaacagaaagag
ggagaaaaagaaagacttgagagggaacagagagaggaggaagagggaatagaaaaggaa
agacaagaacaggctgagaaggaacggttgcagaaggaaaaagtagaatcagaaagggtt
atgaaggaacaacaggacagagagaggatggaacaggaacttaaagaacaagatgagaga
ttagagagggagagagtggaaagagaagaaacagaaaggatggagagagagaaaagagaa
gaaactggaaggatggagagagagaaaagagaacaggaggaaagagagcggtttgagagg
gaaaggaaggaacgagaagaacaagaaagactggagcgagaaaaggagagattagagaga
gaagaaaacgagagaatagagaggaaaaaaagagaagagaggaaaagactggagcgagaa
aaggagagattagagagagaagaaaaacagagaatagagagagaagagaggacagacaga
gaagagaggaaaaggctggagaagaacaaggaagagaaggagcgattagacagggagaga
ggaaaggagaaagaagagagaaacctgaaagaaaaactggagagggagaaggaaagagaa
aagagggaagccgaggagaaagaaaaggagattaaagaacgacaagcgaaggaacaagga
gaaaaacaaacaaagaaagacaacgaaaatgagccaaaaacatccactagaggtcacaga
gcaatcaccaggagaaccgtcatggttccacccacaactgaaccacaacctgaacctgat
attctgtccagccaaccagaaccagtcccagaaagtataactaggtctcgctccaactct
gtcagctctgagagatccacctccaacataggtacccaggggagcagagggagagggggg
aggaagaccaccagcaccacagagtctgcccctggtccagacaaccccacccgcaacagc
accaggagacggacgttggtcgggacggttgtggctccccctactgctgtggaggtcaca
gtgcaggacattctctccagcgaacagtttgttgccaggagaacccgctctcgttccagc
tccaccaactcccacagctccctcaactcagaggtctccaccggtatcacggctagcgtg
agctctcagagcaaagggaggggaggagggaggaggaagactggaacagagtctgtctct
cccagtaacaggcagagtgagcagcctccagccctcaagcccacagccagaggcaggaga
agccagaaagtagaggattatggtccacaccctgagattaatgagaaggctgattctcag
gaggctggtggtaccactagagggcagaagaaaacagacaaaaccaatgagccagaccct
gtagtagcagatgaagaaaccactccagctcaggtaaccgaggactcccccactcctaga
gggaatggaagaggccggggccgaggcggccagaaagacaacacacctgaatccaccact
acaacagcaggaggggaaactcagagtgaagagggagtggggtctaaaacaggtgggaga
gggaaagggaggaagagggggctggaagaggaggaggagagcagtgagttcaaggttccc
cgggggaaagctaaggttcagaggggagggagacgcagggcagcagaggaggaaggagag
aaagaggagaaacctgcatccactccagcaaagagaggcagagcctccactgcacaggtg
aaaaagatagcagaggaggagaagagtatggagagacagagtgagaagatggaagaggct
ggtactgtgcagaggaaagtccgaggcaggcagttgacggttcagataaagaaagaagag
gaatctgttttggactctaattctgtggtgccccagacccctacaggtaagggcagaggt
aagcgtagggcccctgtggaatcatcaccgtttgccaagacccctcgctcctcctctgcc
tctcccctgtcctctctctcctcgcctgggacactgggccgagctagggcctccacgcag
tcctataaggtgttgtttacaggagtggtggatgaggagggggggaaggtggtgtctcgt
ctggggggcagcctggcgaagggcgtggccgacatgacccacctggtgactgacaggatc
cgacgcaccgtaaagttcctgtgtgctgtggcccgtggcgtgcccgtcgtcaccaccgat
tggctggataagtgtggtaaggtgggtagtttcctacctactgacaggtacctggtgaag
gacagggagcaggagaacaagttcagcttctgtctggaggaatcactgaggaccgccagc
acccaacctctactacagggttttgaggtccatgtgaccaggtcagtgttgccagagcca
gcccagatgaaggacatcattgtctgtagcggagctcgcttcctctccaagatgccctcc
actcagaaggcccaggcccggaccctagtgatatcgtgtggggaggactggtctctctgt
gctcctgcactctctgcttctctccccgtcctcagtgctgagttcctgctaactggtata
ttacagcagagagtggacctggtaacccatgtcctctcagcccccaaacccagggcccag
ccaggagccaaaggccaggccagtggcaggaagagaacgtaa

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