Oncorhynchus mykiss (rainbow trout): 110512620
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Entry
110512620 CDS
T07259
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
omy03110
]
110512620 (clpb)
Chaperones and folding catalysts [BR:
omy03110
]
Heat shock proteins
HSP100
110512620 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
AAA_5
ClpB_D2-small
AAA
Ank_5
Ank_4
Zeta_toxin
AAA_22
Sigma54_activat
Torsin
AAA_24
AAA_16
AAA_3
nSTAND3
YchF-GTPase_C
ABC_tran
ATPase_2
RuvB_N
NACHT
AAA_14
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
110512620
NCBI-ProteinID:
XP_036817615
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All DBs
Position
24:complement(33813463..33876580)
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AA seq
682 aa
AA seq
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MLSSVPPRIFMRRSRSLSPCRVLQTSTKDAARNHLILDKADANRNPIVSTSRVSRRGILS
EEAKGQSVSLAIQYHHLAPRWLSNLQGRRSSWASLASKGRNNNNLYWEQSGERTGGQSGS
SRPYALASAGVLSAAAMAFCLKKDSDTKGDALLEAARTNSSQDVARLLGEGVEPNHRHRL
GWTSLMVAAMNRQHSVVKVLLESGADPNAGDDFNNVYDTSREKGIHSLEVLVSREDEFSS
RLSSRAGFRGCTALHYATLADDPLAVRMLLEKGANPLQTNALGHTARAYAKEGELHTLLL
EWEGKFQEAQAKREAEERRRFPLEKRLMEHIIGQEGAINTVASAIRRKENGWYDEEHPLV
FLFLGSSGIGKTELAKQVARYMHKDLKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEG
GQLTKQLKAYPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSN
VASDDIAQHALQLRQEAQELSRRKLADNLDDVQKRDDVTISRQFKDAVIRPILKAHFRRD
EFLGRINEIVYFLPFCPSELQQLVSKELNFWAKKAKQRHDITLLWDRPVLDLLAGGYNLH
YGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLSVHSEDRGGAEGQEGLEQGVPSLRL
EVVGKDSTARTLDIRPPLSPDH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttcggttccaccgcggatcttcatgcgaaggtcgcgcagcctttccccgtgc
cgtgtgctccagacaagcacaaaggacgccgcgaggaaccacctcatcctcgataaagcg
gacgccaaccggaaccccatcgtttctacctcccgtgtctcccgtagaggaattctgagc
gaggaggcgaaaggccagagtgtgagcctggccatacagtatcaccatctggcccccaga
tggctctctaatctccagggtcgcaggagctcctgggcctctctggcttccaagggacgc
aacaacaacaacctgtactgggaacagagcggggaaaggaccgggggacagagcgggagc
agccgcccttacgcactggcctctgctggggtactgtccgctgcagccatggccttctgc
ctcaagaaggactctgatacgaaaggtgatgcacttctggaggctgcaaggaccaacagc
tcacaagatgtggcaaggttgctgggcgagggggtggagcctaaccacagacatcgtctg
ggctggacctctctcatggtggcagctatgaaccgccagcacagcgtggtgaaggttctg
ctggagtctggggctgatcctaacgcaggagatgacttcaacaacgtctatgacacgtcc
agagagaagggcattcactcactggaagtgttagtttccagggaggatgaatttagtagc
aggctaagtagcagggctggtttccgtggttgcacagccctacactacgcaacgctggcc
gacgacccactcgctgtacgcatgctgctggagaaaggtgccaaccccctgcagaccaat
gccttaggacacacagccagagcctacgccaaggagggagagttacacacactactgctg
gagtgggagggcaagttccaggaagctcaagctaagagagaggcagaggagagaagacgt
ttccctctggagaaacgactgatggagcacatcatcggtcaggagggggctatcaacact
gtggcttcagcgatcaggaggaaggagaatggctggtatgacgaagaacatccccttgtc
ttcctcttcctcggctcctctggaatcggtaagactgagctggccaaacaggtggctcgt
tatatgcacaaggacctgaaaaagggattcatccgcatggacatgtccgagttccaggag
aagcacgaggtggctaaattcataggttctcctccaggttatgttggtcatgaagaggga
ggtcagctgactaaacagttgaaggcgtatccaaatgccgtggttctatttgacgaggtg
gacaaggcccatccagacgtactgaccatcatgctacagctgttcgatgagggccgtctt
acagatgggaaggggaagaccattgagtgtaaggacgccatcttcatcatgacctcaaac
gtggccagtgacgacatcgctcagcatgcattgcagctccgccaggaggcccaggagctc
agccgcaggaaactggccgacaacctggacgatgttcagaagagggatgatgtcaccatc
tccaggcagtttaaggacgctgtaattcgccctattctgaaggcccatttccggagggat
gagtttctggggcggatcaatgagattgtctacttcctgccgttctgcccctctgaacta
cagcagcttgtcagcaaagagctcaacttctgggccaagaaggcgaagcagaggcatgac
atcactctgctgtgggaccgccctgttctggacctgctggctggaggttacaacctgcac
tacggagcccgttccatcaaacatgaggtggagcggagggtggtcaaccaactggcagca
gcctatgagcaggagctccttcctaagggctgcaccctccgcctgtctgtccactcagag
gacaggggcggggccgaggggcaggaagggctggagcagggcgtacccagtctgcgtctg
gaggtagtggggaaggacagcacagcacggacgctggacatacgccctcctctcagcccc
gatcactaa
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