Oncorhynchus mykiss (rainbow trout): 110512888
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Entry
110512888 CDS
T07259
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310
Wnt signaling pathway
omy04510
Focal adhesion
omy04520
Adherens junction
omy04916
Melanogenesis
omy05100
Bacterial invasion of epithelial cells
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110512888
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110512888
04520 Adherens junction
110512888
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
110512888
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110512888
05100 Bacterial invasion of epithelial cells
110512888
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_2
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
110512888
NCBI-ProteinID:
XP_036822058
Ensembl:
ENSOMYG00000018527
LinkDB
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Position
3:4096749..4135152
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AA seq
790 aa
AA seq
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MASQSDLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEQGFSQSFTQDQVSDIDGQYAMTRAQRVRAAMFPETLDEGMQLPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTTLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGDALGYRQ
EDPSYRSFHSGGYGQDSMGMDSMMDHDMGAHHPGPEYPVDGLPDLGHAQDLIDGLPPGDS
NQLAWFDTDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtctgatctgatggagctggacatggccatggagcctgaccggaaggct
gcagtgagccactggcagcagcagtcgtacctggactctggtatccactcaggggctacc
accaccgccccctccctgagtgggaagggcaacccagaggaggaggatgtggataaccag
gtgctgtacgagtgggagcagggcttctctcagtccttcacacaagaccaagtgtcagac
attgacgggcagtatgccatgaccagagcccagagggtgcgtgcggccatgtttccagag
accctggatgagggcatgcagctcccctccacccagtttgatggggcacaccccaccaat
gtgcagcggctggctgagccctctcagatgctgaagcatgctgtggtgaacctcatcaac
tatcaggatgatgccgagctggccacgcgtgccatccccgagctgaccaaactactcaac
gacgaggaccaggtggtggtgaacaaggctgcagtgatggtgcaccagttgtccaagaag
gaggctagccgccacgccatcatgcgctccccccagatggtgtcggcaatcgtgcgcacc
atgcagaacaccaacgatgtggagacagcccgctgcaccgccggcaccctgcacaacctg
tcccaccacagagagggtctgctggccatcttcaagtccgggggcatccccgcccttgtc
aaaatgcttgggtccccagtggactcagtgctgttctacgccatcaccaccctacacaac
ctgctgctccaccaggagggtgccaagatggccgtgcgtctggccgggggcctgcagaaa
atggtggccttgctcaacaagacaaacgtcaaattcctcgccatcacaacagattgcctt
cagattcttgcctacggcaaccaagaaagcaagcttatcatcctggccagcggtgggccc
caggccctggtcaacatcatgaggacgtacacatatgaaaagctgttgtggactaccagt
agagttctcaaagtgctctctgtctgctccagcaacaagcctgccatcgtagaggctggt
ggtatgcaggctcttgggcttcacctcacagaccccagtcagagactagtccagaactgc
ctgtggaccctcaggaacctgtcagatgctgccaccaaacagacgaccttagctgaagta
gatgtgatgcaggagggtatggaaggtctgctggggaccctggtccagctcctgggctct
gatgacatcaacgtggtgacgtgtgctgccggcatactgtccaacctcacctgcaacaac
tacaagaacaagatgatggtgtgtcaggttggggggattgaggcgctggtccgtaccgtg
ctgcgtgccggagaccgcgaggacatcactgagccggccatctgcgccctgcgccacctc
accagccgccaccaggatgctgagatggcccagaatgctgtgcggcttcactacggcctg
cctgtggtggtcaagctgctgcatcccccctcccactggcccctcatcaaggccactgtg
ggcctaatccgtaacctggctctatgtccagccaaccatgcccctctgcgtgagcagggg
gccatccccagactggtgcagctgctggtcagagcccaccaggacacccagagacgcacc
tccatgggaggcacccagcagcagtttgtggagggagttcgtatggaggagatcgtggag
ggctgtactggagctctgcacatcctggctagagacgtccacaacagaatcgtcatcaga
ggactcaacaccattccactctttgttcagctgttgtattctccaattgagaacattcag
cgtgtggctgcaggagttctgtgtgagttggcccaggacaaggaggcagcggaggccatc
gaggctgagggcgccaccgcccccctcacagagctgcttcactccagaaacgagggcgtg
gccacctatgctgctgctgttctgttccgtatgtctgaagacaagccccaggactataag
aagcgtctgtctgtggagctcaccagctccctgttcaggacggagcctatgacctggaac
gagacaggagatctgggcctggacatcggcgctcagggagatgccctgggctaccgtcaa
gaagaccctagctatcgctccttccactctgggggatatgggcaggactccatgggtatg
gactccatgatggaccatgacatgggtgcccaccaccccggccctgaatacccagtcgac
gggctgcccgacctgggccacgcccaagacctgatcgatggtcttcccccaggcgacagc
aatcagttggcttggtttgatactgacctgtaa
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