KEGG   Oncorhynchus mykiss (rainbow trout): 110512888
Entry
110512888         CDS       T07259                                 
Name
(RefSeq) catenin beta-1 isoform X1
  KO
K02105  catenin beta 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310  Wnt signaling pathway
omy04510  Focal adhesion
omy04520  Adherens junction
omy04916  Melanogenesis
omy05100  Bacterial invasion of epithelial cells
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110512888
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110512888
   04520 Adherens junction
    110512888
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    110512888
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110512888
   05100 Bacterial invasion of epithelial cells
    110512888
SSDB
Motif
Pfam: Arm ARM_ARMC5 Cnd1 HEAT_2 Adaptin_N ARMC9_ARM Atx10homo_assoc Queuosine_synth
Other DBs
NCBI-GeneID: 110512888
NCBI-ProteinID: XP_036822058
Ensembl: ENSOMYG00000018527
LinkDB
Position
3:4096749..4135152
AA seq 790 aa
MASQSDLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEQGFSQSFTQDQVSDIDGQYAMTRAQRVRAAMFPETLDEGMQLPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTTLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGDALGYRQ
EDPSYRSFHSGGYGQDSMGMDSMMDHDMGAHHPGPEYPVDGLPDLGHAQDLIDGLPPGDS
NQLAWFDTDL
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcttcccagtctgatctgatggagctggacatggccatggagcctgaccggaaggct
gcagtgagccactggcagcagcagtcgtacctggactctggtatccactcaggggctacc
accaccgccccctccctgagtgggaagggcaacccagaggaggaggatgtggataaccag
gtgctgtacgagtgggagcagggcttctctcagtccttcacacaagaccaagtgtcagac
attgacgggcagtatgccatgaccagagcccagagggtgcgtgcggccatgtttccagag
accctggatgagggcatgcagctcccctccacccagtttgatggggcacaccccaccaat
gtgcagcggctggctgagccctctcagatgctgaagcatgctgtggtgaacctcatcaac
tatcaggatgatgccgagctggccacgcgtgccatccccgagctgaccaaactactcaac
gacgaggaccaggtggtggtgaacaaggctgcagtgatggtgcaccagttgtccaagaag
gaggctagccgccacgccatcatgcgctccccccagatggtgtcggcaatcgtgcgcacc
atgcagaacaccaacgatgtggagacagcccgctgcaccgccggcaccctgcacaacctg
tcccaccacagagagggtctgctggccatcttcaagtccgggggcatccccgcccttgtc
aaaatgcttgggtccccagtggactcagtgctgttctacgccatcaccaccctacacaac
ctgctgctccaccaggagggtgccaagatggccgtgcgtctggccgggggcctgcagaaa
atggtggccttgctcaacaagacaaacgtcaaattcctcgccatcacaacagattgcctt
cagattcttgcctacggcaaccaagaaagcaagcttatcatcctggccagcggtgggccc
caggccctggtcaacatcatgaggacgtacacatatgaaaagctgttgtggactaccagt
agagttctcaaagtgctctctgtctgctccagcaacaagcctgccatcgtagaggctggt
ggtatgcaggctcttgggcttcacctcacagaccccagtcagagactagtccagaactgc
ctgtggaccctcaggaacctgtcagatgctgccaccaaacagacgaccttagctgaagta
gatgtgatgcaggagggtatggaaggtctgctggggaccctggtccagctcctgggctct
gatgacatcaacgtggtgacgtgtgctgccggcatactgtccaacctcacctgcaacaac
tacaagaacaagatgatggtgtgtcaggttggggggattgaggcgctggtccgtaccgtg
ctgcgtgccggagaccgcgaggacatcactgagccggccatctgcgccctgcgccacctc
accagccgccaccaggatgctgagatggcccagaatgctgtgcggcttcactacggcctg
cctgtggtggtcaagctgctgcatcccccctcccactggcccctcatcaaggccactgtg
ggcctaatccgtaacctggctctatgtccagccaaccatgcccctctgcgtgagcagggg
gccatccccagactggtgcagctgctggtcagagcccaccaggacacccagagacgcacc
tccatgggaggcacccagcagcagtttgtggagggagttcgtatggaggagatcgtggag
ggctgtactggagctctgcacatcctggctagagacgtccacaacagaatcgtcatcaga
ggactcaacaccattccactctttgttcagctgttgtattctccaattgagaacattcag
cgtgtggctgcaggagttctgtgtgagttggcccaggacaaggaggcagcggaggccatc
gaggctgagggcgccaccgcccccctcacagagctgcttcactccagaaacgagggcgtg
gccacctatgctgctgctgttctgttccgtatgtctgaagacaagccccaggactataag
aagcgtctgtctgtggagctcaccagctccctgttcaggacggagcctatgacctggaac
gagacaggagatctgggcctggacatcggcgctcagggagatgccctgggctaccgtcaa
gaagaccctagctatcgctccttccactctgggggatatgggcaggactccatgggtatg
gactccatgatggaccatgacatgggtgcccaccaccccggccctgaatacccagtcgac
gggctgcccgacctgggccacgcccaagacctgatcgatggtcttcccccaggcgacagc
aatcagttggcttggtttgatactgacctgtaa

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