Oncorhynchus mykiss (rainbow trout): 110512919
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Entry
110512919 CDS
T07259
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110512919
03460 Fanconi anemia pathway
110512919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110512919
03400 DNA repair and recombination proteins [BR:
omy03400
]
110512919
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110512919
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Topoisomerases
110512919
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110512919
FA (Fanconi anemia) pathway
110512919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Trypan_PARP
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
110512919
NCBI-ProteinID:
XP_036828181
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MLIHHLTRALFTSGRPLTLRLQVHRGFSVTGQKRTDSPGDMIRRTQIKRVLCVAEKNDAA
KCIAEIMSDGRARRREGLSVYNKLYEFEYNLFGRNVTVCMTSVSGHLLGLEFKAQFQKWH
SCNPVLLFDAEVEKYCPENFVQIKRTLEREVSQCQALVIWTDCDREGENIGFEVIDVCKA
VKPGVQVFRARFSEITPNSIRRACDTLTEPDGNVSDAVDVRQELDLRIGASFTRFQTLRL
QKTFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPETFYKIRVLHEVEEESVEFSWK
RNRLFNHTACLVIYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLVSRKLRIGAKE
TMKIAEKLYTQGLISYPRTETNLFPKDLALGPLVEHQTHSPSWGAFARGVMEQPGGPNPR
QGTKTDQAHPPIHPIKYTNTLQGNEQRVYEFIVRHFLACVSLDAVGQETVVEVEMAHERF
SANGLMIIRRNYLDVYPYDRWSTKVIPVYEQGSQFQPSAIEMLDGQTSPPQLLTEADLIS
LMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPHLR
AELEADLKLVSEGRKDKQSVLRHHIQKYKTVFVESVKKAKRLDEALSIYLGAAQEFSESE
QQDMEMPLPVRKCPQCGRDMVLRRRKEGNGKYLACVGYPECKCSVWFPDTVLEVNRDESV
CPTCQPRPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRMGGGGVAGGV
GGAVGGRGGAGGGRGVGAAGGGRGAAGGGRGGGRGDTATNQPRPRPAPRPDPLSPQAPNP
PSSSWPPHPRPDPQAPPPDPRGGDATVCNCGSEAVLLTVRKDGPNQGRQFYKCSSGGCNF
FLWTDQPDTNVYLPGPQGAPPSRPQQPPRSSVGEVVCNCSEPAVQRTVQKEGHNKGRVFH
TCEKPRDQQCGFFLWADENIPPPGSGSGGGDWGKRGRETGGGGAPPTTKPPATRKPRTCG
ICHMPGHTRVTCPQR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacatcatctgactagggctctgttcacatccggacgaccgttaacgttacgg
ctccaggtccacagggggtttagcgtcaccggacagaagaggacagactccccgggagac
atgatccggaggactcagatcaaacgggttctctgtgtggcggagaagaatgacgcggcc
aaatgcatcgcggagatcatgtctgacggcagagcgaggaggagggaggggctgtctgtc
tataataaactctatgagtttgaatacaacctgtttggaaggaatgtgacggtgtgtatg
acgtcagtttcaggtcatctgttgggtctggagttcaaggctcagttccagaaatggcac
agctgtaatcctgtcctgctgtttgatgctgaggtggagaagtattgtcctgagaacttt
gttcagatcaagcggaccctagagagagaggtgagtcagtgccaggcgcttgtcatctgg
acagattgtgacagagagggagagaacatcggctttgaagtgatagacgtctgcaaagca
gtcaagcccggtgtgcaggtgttccgtgctcggttctctgagatcactcccaactctatc
aggagagcatgtgacacgctaacggaaccagacggcaacgtcagtgatgctgtggacgtc
cgtcaggagctggacctcaggataggtgcatcgtttaccaggttccagacactccgcctt
cagaagaccttccccgcctcgttagccaatcagctgatctcgtatggcagttgtcagttc
cctacgctgggattcgttgtggaacgtttcaaatccatccaggcgtttataccggagaca
ttctacaagatcagagtcctccatgaggtagaggaggaatcagtagagttcagctggaag
aggaacagactgttcaaccacacagcctgtctagtgatctaccagatctgtatggaggat
cccatagcaaccgtcacctcggtaaccagtaaacccaaaagcaagtggaggcctctgccc
ctggacacagtggaaatggagaagctggtttccaggaagttgagaatcggcgccaaagag
accatgaaaatcgctgagaaactatacacacaggggttaatcagttatccgcgtacagag
accaacctgtttcctaaggacctggccctgggccccttggtggagcatcagacacacagc
ccctcctggggggccttcgctaggggggtgatggagcagccagggggacccaacccacgg
cagggcaccaagacagatcaggctcatccccctatacaccccatcaagtacaccaacaca
ctacagggcaacgagcagcgtgtgtatgagttcattgtgcgtcacttcctggcgtgcgta
tcccttgatgctgtggggcaggaaacggtggtcgaggtggaaatggctcacgagaggttc
tccgcaaacggcctcatgatcatcaggaggaactacctggacgtgtacccctacgaccgc
tggagcactaaggtgatcccagtgtatgagcagggtagccagttccagccgtcagcgata
gagatgctggatggccagacctctcctcctcaactcctcacggaagcagacctcatatca
ctgatggagaaacacggcatcggtacggatgccacccacgcagatcacattgagaccata
aagagccgtatgtacgtgggactaacagctgatcagaggtttctaccaggagaactgggg
atgggactggtggagggttataactccatggggtatgagatgtctaagccacacctgcgg
gcggagctggaggcggacctgaagctggtatcggaggggaggaaggacaaacagagcgtg
ttgagacaccacattcaaaaatacaagacggtcttcgtagagtctgttaagaaagccaag
aggttggacgaggctctgtctatctatctgggcgctgcccaggagttcagcgaatcagag
cagcaggatatggaaatgcccctcccagtcaggaaatgtcctcagtgtgggcgggacatg
gtgctgcggaggaggaaggaggggaacgggaagtacctggcctgcgttggttacccagaa
tgcaagtgttccgtgtggtttccggacacggtgttagaggtcaacagagacgagtctgtc
tgtcccacctgtcagcctcgccccgttcacatgttaaagttgaagttccgacgaggcagc
ctccctcccatgatgccgctggagtttgtgggctgcatcggagggtgtgacgagacactg
agggaggtgctcaacctcaaatacctcagaatgggtggagggggggtggcgggaggagta
ggaggagctgtaggaggaagagggggagctgggggaggaagaggagtaggagcagctggg
ggaggaagaggagcagctgggggaggaagaggaggaggaaggggagacactgcaaccaat
cagcctagacctcgcccagcccccagaccggaccccctgtctccccaagcccccaacccc
ccctcctcgtcctggcccccccaccctcgccctgacccccaggccccaccccctgacccc
agaggtggtgacgccacagtgtgtaactgtgggtcggaggcggtcctcctcaccgtgagg
aaagacggtcctaaccagggcagacagttctataagtgttcctctggaggctgtaacttc
ttcctgtggaccgaccagcccgacactaacgtttaccttccaggcccccagggggcgcca
cccagcaggccacagcagccccccaggagctccgtgggggaggtggtttgtaactgcagt
gagccagcggttcagaggacagtgcagaaggaaggacataataaaggaagagtgttccat
acctgtgagaagcccagagatcaacagtgtggattcttcctctgggctgacgagaacatc
ccaccaccaggttcaggttctggagggggagactgggggaagagggggagggagactggg
ggaggaggagccccccccaccaccaaaccccccgctaccaggaagccccgtacctgtggc
atctgtcacatgcctggacacacacgtgtcacctgtcctcagcgctga
DBGET
integrated database retrieval system
