KEGG   Oncorhynchus mykiss (rainbow trout): 110513012
Entry
110513012         CDS       T07259                                 
Symbol
itga8
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04514  Cell adhesion molecules
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110513012 (itga8)
   04514 Cell adhesion molecules
    110513012 (itga8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110513012 (itga8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110513012 (itga8)
   04810 Regulation of actin cytoskeleton
    110513012 (itga8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110513012 (itga8)
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin alpha subunits
   110513012 (itga8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 110513012
NCBI-ProteinID: XP_036827566
Ensembl: ENSOMYG00000014365
LinkDB
Position
3:21026137..21091292
AA seq 1056 aa
MCAYRMCTFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDSTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNSEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVHGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWDSSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNKCIPDLQLSASMDRTEL
VIGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYAMEVLTEGPISCRSNTSLNLLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPASLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgtgtgcttataggatgtgcacgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggccgtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccccgactccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggaaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
agtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccatggagagaaacagacccacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttcttctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaat
gacgtggcagtgggttgtccgtttggaggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggactccagtagtggcctctccggctacggcttcacactgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaaaagagttcatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacacggtctacctacgaggggaggatgaatttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgtggg
gaagacaacaagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtgatcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacagaatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagcagtattcgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctatggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagcgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactccaccgtgtccttcagagtgacggccctgccctatcgcctccagcccgcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgagcacggctgccagcggat
gacgtgtcagatcgtgagcagctgacctctgaccaattagcagacgcctaa

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