Oncorhynchus mykiss (rainbow trout): 110513012
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Entry
110513012 CDS
T07259
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04514
Cell adhesion molecules
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110513012 (itga8)
04514 Cell adhesion molecules
110513012 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110513012 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110513012 (itga8)
04810 Regulation of actin cytoskeleton
110513012 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110513012 (itga8)
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110513012 (itga8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
110513012
NCBI-ProteinID:
XP_036827566
Ensembl:
ENSOMYG00000014365
LinkDB
All DBs
Position
3:21026137..21091292
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AA seq
1056 aa
AA seq
DB search
MCAYRMCTFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDSTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNSEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVHGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWDSSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNKCIPDLQLSASMDRTEL
VIGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYAMEVLTEGPISCRSNTSLNLLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPASLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcttataggatgtgcacgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggccgtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccccgactccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggaaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
agtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccatggagagaaacagacccacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttcttctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaat
gacgtggcagtgggttgtccgtttggaggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggactccagtagtggcctctccggctacggcttcacactgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaaaagagttcatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacacggtctacctacgaggggaggatgaatttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgtggg
gaagacaacaagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtgatcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacagaatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagcagtattcgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctatggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagcgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactccaccgtgtccttcagagtgacggccctgccctatcgcctccagcccgcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgagcacggctgccagcggat
gacgtgtcagatcgtgagcagctgacctctgaccaattagcagacgcctaa
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