Oncorhynchus mykiss (rainbow trout): 110513199
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Entry
110513199 CDS
T07259
Name
(RefSeq) netrin receptor DCC-like isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
omy
Oncorhynchus mykiss (rainbow trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
V-set
Interfer-bind
C2-set_2
CRLF2-like_D2
Ig_4
Sp38
Protocadherin
EphA2_TM
GH101_dom-5
Shisa
TM_ErbB1
DUF4998
CytochromB561_N
Herpes_UL74
DUF6479
Motif
Other DBs
NCBI-GeneID:
110513199
NCBI-ProteinID:
XP_036832516
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All DBs
Position
5:complement(3784542..4417531)
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AA seq
1471 aa
AA seq
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MEGSFGCFWVKRLSVFVWLCYLTGDSPSYGAQSSSSSQVFVDFSFVLEPQDAVTLRGGVL
QLDCEAQSDQGIPIIVWKKDGVLLSAVVDERRQQFPNGSLVVQNVVHSRHHRPDEGLYQC
LARLDGVGAIVSRTAQVTVSGPLKLVVPTESVSSYLGDTALMRCEVTGDPMPVVRWQKNR
EDLPLTLTPESRVVVLPSGSLQVSKVQPPDSATYRCLADNPGSARTGSDADLRVLPEPGT
TRGLLFLQKPQRVTSLLGRDAVLECSASGFPTPAFHWMRGAERIQSRSKKYSLLGGSNLL
ISSVTDDDSGSYSCVAFNKNQNITASCELSVLVPPQFLNYPTNTYSYESTDMELECAVTG
NPPPTVRWMKNGEEVIPSDYFQIVDGSNLQILGLVKSDEGFYQCVAENEAGNAQAMAQLI
LREPVVPSSGVLLPSAPRDVVPVLVSSRFVRLSWRPPQETRGTVQTYGIYYSQDTVNRER
SVNVSEPETLQMTVSNLKPEETYSFRVVAYNDNGPGERSETLKLTTQPELHVPGPVENLQ
VESISPTSIQASWDVPTYANGPLLGYRLLWTETPSGKEQSVEVNGQSYKMEGLKKFTEYS
LRVLAVNRYGPGVTTEDMSITTLSDVPSAPPQNISLEVVLSRSIKVSWQPPPPNSQNGFI
TGYKLRHRKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQVSAMTANGTGPASEWFTAET
PENDLDESQVPNQPSSLHVRPLPNSIIMSWTPPLNPNILVRGYIIGYGVGSPYAETVRVD
SKQRYYAIENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSITDPIDPSDDDLFHLFDKY
PTPMPDTSTPMIPPVGVQAVALTPDSVRVSWADNSMTKNQKTTEVRYYSVKWKTSYSTSG
KFKSADTTALSHSVTGLKPNTMYEFAVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTV
ISREGRPRAILISWQPPMETNGRIMGYILYYTLDKNMPIDDWVMESISGDRLTHQVMDLN
LDTVYYFRIQAKNAKGVGPLSDPIHFRTNKVEHPDKMANDQGRHGDGGYWPSDNNLIDRS
SLNDIGQMRPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVVIVALICTRRSSAQQRKKRAT
HSTGKRKGSQKDLRPPDLWIHHEEMELKNMEKPASAAPSGRDSPIQGSIQDIRSQSVSHS
QSESQMGSKSSHSGGDNDEASSCISTLERSLADRRATRTKLLIPMDSQPSNTTVVSAIPV
PTLEGSQYPGILSSPTCGYSHGTLTTHPKFTLRPMPFPSLTVDRSYTAAISTEGSSTLGV
QQTLISSSSSKPGVGGKGDLSLPGTEEVGGTSTRTIPTACVRPTHPLRSFANPLLPPPMG
TIDPKVYTPMMPHSSASLPKPTVKTASLGQAGKARSPLLPVSVPTAPEMGEEGQKQIDDS
ANVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggagggatcatttggatgtttttgggtgaaaagactttcggtatttgtctggttatgc
tatctcaccggtgattcaccatcatatggtgcacagtcctcctcatcgtcccaggtgttc
gtggacttcagcttcgttctggaaccccaggacgcggtgacattacggggaggtgttctt
cagctggactgtgaggctcagtcagaccagggtattccaatcatcgtctggaagaaggac
ggggtgttgctcagtgccgtggtggacgagaggagacagcagttccctaacgggtctcta
gtggtccagaacgtggttcattcacgacaccaccgacctgacgaggggctctaccagtgt
ctggccaggctggatggggtgggggccatcgtcagcagaacggctcaagtgactgtttct
ggtccgttgaagctcgtggtccctacagagtcagtgtcctcctacctgggtgacacggcc
ctgatgcgctgtgaggtgactggtgatcccatgcccgtggtacgctggcagaagaacaga
gaggacctgcccctcaccttgacaccagagagcagggtggtggtactgccctctggctcg
ctccaggttagcaaagtccagccaccagactctgccacctaccgctgcctggcagacaac
cctggcagcgcccgcaccggcagcgacgcagacctacgtgtgttgccagaacccggaacc
accaggggccttctgtttctccagaagccccagagagtcacctccctcctggggagagat
gccgtgttggagtgctccgcctctgggttccccacccccgccttccactggatgagagga
gccgagaggatacagagcaggtctaagaagtactccctgctgggcggcagtaacctcctg
atcagcagcgtaacggacgacgactcaggctcctacagctgcgtggcgtttaacaagaac
cagaacatcacggcttcctgcgagctgtccgtcctcgtgccaccccagttcctgaactac
cccaccaacacgtattcctatgagagtacggacatggagctggagtgcgctgtaacgggg
aaccctcctcccacggtgcgttggatgaagaacggagaggaggtcatccccagtgactac
ttccagatcgttgatggcagtaacctccagatccttggtctggtgaagtcagatgaaggt
ttctatcagtgtgtggctgagaacgaagcagggaacgcccaggctatggcccagctcata
ctgagagagccagttgtccccagctcaggtgtcctcctcccctctgctccccgtgacgtg
gtccctgtcctagtttccagccgttttgtccgcctcagctggcgtcccccgcaggagacc
agaggaactgtccagacttacggcatctactactcccaggacacggtcaacagggagagg
tctgtgaacgtgtcggagccagagaccctccagatgactgtcagtaacctgaagccagag
gagacctactccttcagagtggtggcctacaacgacaacggccctggggagagatccgag
acactcaaactcaccacgcagcctgagttgcatgtccccgggccagtggagaacctccag
gtagagtccatctctcccacctccatccaggcctcctgggacgtcccgacctacgccaac
gggcccctgctggggtacagactgctctggaccgagacaccctctgggaaggaacagagt
gtggaggtgaacgggcagagttataagatggaggggctgaagaagttcacagagtactcg
ttgcgtgtcttggcagtgaaccgctatggccctggggtcaccacagaggacatgagcatc
accacgctgtctgatgtgccaagtgctccaccacaaaacatctccttagaagtcgtcctc
tccagaagcattaaggtgagctggcagccccctcctcccaacagccagaacgggttcatc
accggctacaagctccgacaccggaagaccggccgacgaggagaccaggaggccatcgaa
cctaacaacttctggtacctgttcacagggctggaaaaaggcagtcagtacagtttccag
gtctctgccatgacagctaacggcacgggcccggccagcgagtggttcaccgccgagacg
ccagagaacgaccttgacgagagccaagtcccgaaccagccgagttccctccatgttcga
cccctgcccaacagcatcatcatgagctggactcctcccctaaaccccaacatcctagta
cggggctacatcattggctacggagtaggaagtccctacgctgagacggtcagggtggac
agtaagcagcgatactacgccatagaaaacctggagcccagttcccactatgtcatctcc
ctgaaagccttcaacaatgcaggagaaggggtccccctgtacgagagcgctgtgaccaga
tctataacagaccccattgatccgtcagacgacgatctgttccatctgtttgataaatat
cctactcccatgccagatacatccacccccatgatccccccagtaggtgtccaggccgtg
gccctgaccccagactctgtcagggtcagctgggcagacaactccatgaccaagaaccag
aagaccactgaggttcgctactactccgtcaagtggaagaccagctactctactagtggg
aagttcaagtctgcagacacaacagccctcagccactccgtcactggccttaagccaaac
accatgtacgagttcgctgtcatggttaccaagggccgcaagtctagcacgtggagtatg
accgctcatgccaccacttacgaagcagctcccagctccgcccccaaggacctgacggta
atcagtcgtgaggggagacccagagctattctgattagctggcaacccccaatggagact
aacggacggatcatgggctatatcctgtactacaccttggataagaacatgcctattgat
gactgggtaatggagagtatcagtggagaccgtctgacccaccaggtgatggacctgaac
ctggacacagtctactacttcaggatccaggctaagaatgccaagggagtgggtcccctg
tcagaccccatccacttcaggactaacaaagtggaacatccagacaagatggccaacgat
caaggtcgccatggagatggcggctactggccttctgacaacaacctgattgataggagc
agtttgaacgacattggtcagatgcgtcctcctcacggcagcgtgactccccagaagaac
agcaaccttctggtcatcatcgtggtctccgtgggtgccgttaccgtggtagtggttgtc
atagtagcgctgatctgcacccggcgctcctccgcacaacagagaaagaagcgtgccacc
cacagtacagggaagagaaaaggtagtcagaaggacctgagacctccagacctgtggatc
catcatgaggagatggaactgaagaacatggagaagcctgccagcgccgccccctccgga
cgcgattcgcccatccagggttctatccaggatatcaggtctcagtctgtcagtcacagc
caatcagagagccagatgggcagtaagagcagccactcaggtggagacaacgatgaggct
tccagctgcatctcaacgttagagcgctctctagctgacaggagggcgacacgtaccaag
ctgttgatccccatggactctcagcctagcaacaccactgttgtcagtgccatcccagtg
ccaaccctggagggtagccagtaccctggcattctgtcctcgcccacctgcgggtacagc
catggtactttgaccactcatcccaagttcaccctgagaccgatgcccttccccagcctc
accgtggaccgcagctacacagcagcgatatcgacagagggcagctccacgctgggggta
cagcagaccttgatcagcagcagtagcagtaagccaggtgtaggaggtaaaggggacctt
tctctccctggcacagaggaggtcggaggtacctcgacccgtaccatcccaaccgcctgc
gtccggcccacgcaccccctacgcagcttcgccaaccccctcctgcctccacccatgggc
accatcgaccccaaggtctacacacccatgatgccacattcaagtgccagcctacccaag
ccaacagtaaaaacagcatctctggggcaagctggcaaggccagatcaccactactaccg
gtctccgtgccaacagcccccgagatgggtgaagagggacagaaacagatagatgactca
gccaatgtttacgaacaagacgacttgagtgaacagatggcgagcctagagggactcatg
aagcaactcaacgccatcactggctcggccttttaa
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