Oncorhynchus mykiss (rainbow trout): 110513336
Help
Entry
110513336 CDS
T07259
Symbol
si:ch211-81a5.1
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110513336 (si:ch211-81a5.1)
04121 Ubiquitin system [BR:
omy04121
]
110513336 (si:ch211-81a5.1)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110513336 (si:ch211-81a5.1)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110513336 (si:ch211-81a5.1)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110513336 (si:ch211-81a5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Zn_ribbon_19
zf-C3HC4_3
HypA
C1_2
KIAA1549
DUF7560
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
110513336
NCBI-ProteinID:
XP_036826910
UniProt:
A0A8C7PJV1
LinkDB
All DBs
Position
32:39279326..39290813
Genome browser
AA seq
313 aa
AA seq
DB search
MAEAAAAQQHRFFCHCCKGEIDPKFPEFTCPRCESDFIEELSEDSSLLENSSTAEANDDA
GTLFSELWQLLFMERSALLSDPSAYESDPSQLQAAPASDAVDDELEGPSVDPVGTEPLEP
EPERPSRPPSQGRRQSRAPAVEGIVQQFLAGLFANNGNPGVAPATLSGMFHSNPGDYAWG
QGGLDAVITELLGQFESTGPPPAEKEMISSLPTVNISQEQTDTRLECPVCREEYSVGESV
KQLPCLHYFHSDCIVPWLKLHDTCPVCRKSLDGVDQSIQPPPEPPEPPPPSGQTLRGRDG
LFEITVHFLGNCD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagctgcggcacaacaacaccgctttttctgtcactgctgtaaaggtgaa
atcgaccctaaattcccagaattcacttgccccaggtgtgagtccgatttcattgaggag
ttgtcagaagactccagtctcttggagaacagcagcactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacgctctgccctcctctcg
gacccctccgcctatgagtctgacccgagccaactacaggctgccccagccagtgatgca
gtggatgacgaactggagggcccttctgtggaccctgtgggcacagagcctttggagcct
gaaccggaacgcccctctcgcccgcctagccaggggaggcgacagtcccgcgcgccagca
gtggagggtattgtgcagcagtttttggctggcctgtttgccaacaatggaaatccaggt
gtcgcaccagctacactgtctggcatgttccattcaaatccaggggactatgcctggggt
cagggaggtctagacgcagttatcacagagttgttaggtcagtttgagagcacaggtcca
cctcctgcagagaaggagatgatctcatccctccccacagtcaacatctctcaagaacag
acagacacaagactggagtgtccagtatgtagggaggagtactccgtgggagagtctgtc
aaacagctgccctgcctccattatttccacagtgactgcatagtgccatggctcaaactg
cacgatacatgtcctgtgtgtcgtaaaagtcttgacggcgtcgaccagagcatccagccc
ccaccagaacccccagagcccccccctccatcaggacagaccctcagggggagagacggg
ctatttgagatcactgtacatttcctggggaactgtgattga
DBGET
integrated database retrieval system
