Oncorhynchus mykiss (rainbow trout): 110513413
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Entry
110513413 CDS
T07259
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110513413 (irx2a)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110513413 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
110513413
NCBI-ProteinID:
XP_036821185
Ensembl:
ENSOMYG00000024417
ENSOMYG00000039314
LinkDB
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Position
3:complement(510967..515209)
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AA seq
445 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSDELARSSSGSAFSPYPGSAAAFTASAS
GFSSPMPYSTDPATGFPSYMSSPYDAQGMAGALSYHPYGSPGYPYQLNDPAYRKNATRDA
TATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNK
SEDEDDGDGERNDDRLEKNLDNSETSAEDEGISLQVDTLTDHSCSAESDGDKVSCRIGDQ
VCESGSDTKDKCEDDYDDHELENDERHRSLSPKPVTSSPLTGLEASVLNNHHRENNNKSC
LDSRISGRHNQAVKPKLWSLAEIATSDPKQQQHHPGQTCPSLGLLTSTSSTPSPAVPGAV
YSASSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILQYNSANDGLTQTAAEVSTMHKHTT
DSLLKTNANHIEQFRPSHLYSKKGT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacccccagggttacctctaccagccgccgggctccctggctctctactcctgc
ccggcttacggggcttcagccctggctgccccgaggagcgacgagctggccaggtcgtcc
agtggatcagcctttagtccttaccccggatcagctgctgccttcacggcttcagccagc
ggcttctccagcccaatgccatactccacagaccctgccacgggatttccttcctacatg
agctctccttacgacgcgcagggcatggccggggcgctgagctaccacccctacggtagc
ccgggatacccctaccagctcaacgacccggcctaccgcaagaacgcgacccgagacgcc
accgccacgctgaaggcctggctacaggagcacaggaagaacccctaccccaccaaggga
gagaagatcatgttggccatcattactaagatgaccctgacgcaggtgtccacctggttc
gccaacgccaggaggaggttgaagaaagagaacaagatgacgtgggctccccggaataag
agtgaggatgaggacgatggagacggagagaggaatgatgaccgcttggagaaaaatctt
gacaacagcgagacgtccgcggaggatgaaggtatcagtttgcaggttgatacccttaca
gaccattcttgttcagcggagtctgatggggataaggtgagctgtcgaatcggggaccag
gtctgtgagtctgggtcagatactaaggacaaatgtgaggatgattatgatgatcacgaa
ctggagaatgatgaacgacaccgaagcctgtcacctaaacctgtgacatcatcaccacta
acagggcttgaggcctcggtcttaaacaatcaccaccgggaaaacaacaacaaatcatgt
cttgacagccgaatctcaggtcgtcacaatcaagccgtcaaacccaaactgtggtcgtta
gcggagatcgctacttcagacccgaagcagcagcagcatcacccggggcagacttgtcca
tccctcggtcttctaacctccacctcctccaccccttccccggccgtccctggcgctgtg
tactccgcctcttccatcctaggacgacccatctactacacgtctccgttttacagtaat
tacacaaactatggcaacttcagcccgctgcagggtcaagggattctgcaatataactct
gctaacgacggactcacacagactgctgctgaggtcagcaccatgcataaacacaccact
gactctctgcttaaaacgaacgctaaccacattgaacagttcagaccctcacatttatac
tctaagaaaggtacgtaa
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