KEGG   Oncorhynchus mykiss (rainbow trout): 110513696
Entry
110513696         CDS       T07259                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04210  Apoptosis
omy04530  Tight junction
omy04540  Gap junction
omy04814  Motor proteins
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110513696
  09143 Cell growth and death
   04210 Apoptosis
    110513696
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110513696
   04540 Gap junction
    110513696
  09142 Cell motility
   04814 Motor proteins
    110513696
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110513696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110513696
   03036 Chromosome and associated proteins [BR:omy03036]
    110513696
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110513696
   04147 Exosome [BR:omy04147]
    110513696
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110513696
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110513696
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110513696
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110513696
  Exosomal proteins of other body fluids (saliva and urine)
   110513696
  Exosomal proteins of colorectal cancer cells
   110513696
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110513696
NCBI-ProteinID: XP_021449109
Ensembl: ENSOMYG00000022170
UniProt: A0A8C7RAM4
LinkDB
Position
3:82849989..82853643
AA seq 450 aa
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaatgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
acctgtggaggtggagacgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgttgacctggagcccactgtcatcgatgaggtgaggaca
ggtacctatcgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacctggttctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcacaggttctggtttcacctccctgctgatggaacgtctgtctgtggac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggaacactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgatattgag
cgtccctcgtacaccaacctcaacaggctcattggtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgcccctgtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaagaccaaacgtacc
atccagtttgtggactggtgtcccactggcttcaaggtgggcatcaactaccagccccca
acagcagttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa

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