Oncorhynchus mykiss (rainbow trout): 110513868
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Entry
110513868 CDS
T07259
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110513868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110513868
Membrane trafficking [BR:
omy04131
]
Exocytosis
Others
Others
110513868
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110513868
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Rod_CreS
CCDC39
TMF_DNA_bd
Tropomyosin
CCDC192
DUF5798
MTUS1_CCDC69_CC2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
110513868
NCBI-ProteinID:
XP_036812711
LinkDB
All DBs
Position
21:complement(10134288..10402746)
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AA seq
951 aa
AA seq
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MYGSSRSVAKMEGNNGSSQSPGRSPCLPRSPRLGHRRTNSTGGPGGKTLSMENIQSLNAA
YATSGPMYLSDNEVISQQTQAYPNPNHDPSLPKSTMTLGRSGAKLPYGVRTTAMGSNPNI
SQGGGGSSMPSDSIAFGCDQVSSSQSSLQQASTVPHSLRQTRDNTIMDLQTQLKEVLREN
ELLRGEVDVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKISVWKEQYRVVQDETQHL
QMTVQALQDELRTQRDLNQLFQQDCSGGRPGEPLSFEPTEENFHRLQAEHQRQAKELFLL
RKTLEEMELRIDSQKQTLGARDQSIKKLLEMLQSKGLSAKASEEDHERTRRLAEAEMHIH
HLDSLLEQKDKETNALREELHRRSYEGAPESAKTKALQTVIEMKDSKVQSLERGLRDLEE
EIEMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSQREVQGEELKQKAAD
LQEEVSAIDQVKQDLSRKETELMGMRTKLETLTNQFSDSKQHIEVLKESLTAKEQRSTII
QTEVDALRLRLEEKDSQLNKKSNQIQETSEEKGTLSREVHDLKDMLEVKERKVNVLQKKI
ENLQEQLRDKEKQMSSLKDRVRSLQTDTSNTDTALTTLEEALAEKERIIERLKEQRDRDD
REKTEDIESNKKELKELREKLSLLQGDLSDRETNLLDLKEHASSLVSSGLKKDSKLKSLE
MSLEQRKDEFIKMEKQLKKAQNAMLEAQANTELSERIVTLEQEVTRHREDSGKAQVEVDR
LLEILREMENEKNDKDKKINELENFASRQVKDQTKTVAHLKHKEQVEKSKNAQLVQEVRK
REDNLNESSQHVKDSLRQKEERIEELEEALRESVQITAEREMVLAQEEAARTHTEKQMEE
LLAAMGKVKLELESMQAKLSSTQQSLAEKEAHLTTLRAERRKHLEEVLEMK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgctccgttgccaagatggagggcaacaacggcagcagtcagagt
cccggtcgctccccctgcctaccccgctccccgcgcctcggccaccgtcgcaccaacagt
acaggaggccccgggggaaagaccctctccatggagaacatccagtctctgaacgcggcc
tatgccacctccggacccatgtacctcagtgacaacgaggtcatctctcaacagacccag
gcctatcccaaccccaaccacgaccctagcctgcccaagagcaccatgaccctgggtcgc
tccggagcaaagctcccttacggcgtccggacaaccgccatgggctccaaccccaacatc
agccagggaggtggaggctcgtccatgcccagtgacagcatcgcgtttgggtgtgaccaa
gtgtcctcgtcccagtccagcctccagcaggcgtccacggtgcctcactccttacgccaa
accagagacaacaccatcatggacctccagacccagctgaaggaggtgctgagggagaac
gagctcctccggggggaggtggatgtgaaggagagcaagctgagctcttccatgaactcc
atcaagaccttctggagccccgagctgaagaaggagagagccctgaggaaggacgaggtg
tccaagatctctgtctggaaggagcagtacagagtggtacaggacgagactcagcacctc
cagatgacagtgcaggccctgcaggatgagctgaggactcagagagatctgaatcagttg
ttccagcaggactgtagtggagggagacctggagaacctctgtcattcgaacccactgag
gagaacttccacaggctccaagctgaacaccagagacaggccaaagagttgttcctcctg
aggaagacgctggaggagatggagttgaggatcgacagtcagaaacagaccctgggggcc
agagaccagtccatcaagaaactactggagatgctgcagagcaaaggtctgtcagccaag
gcctcagaggaagaccatgagaggaccaggagactggctgaggctgagatgcacatccac
cacctagacagtctactggaacagaaagacaaggagaccaacgccctacgagaggagctg
caccgacggagctatgaaggagcccctgaatcagccaagaccaaggccctgcagaccgtc
atcgagatgaaggactctaaggtccagtctctggagcgaggtctgagggacctggaggaa
gagattgagatgttaaagtctaacggggctctgagcactgaggagagagaggaggagatg
aaacaaatggaggtgtacagatcccactccaagttcatgaagaacaaggtagagcagctg
aaggaggagctgtctcagagagaggtccagggggaggagcttaagcagaaggctgccgac
ctgcaggaggaagtgtctgccattgaccaggtaaagcaggacctcagcaggaaggagaca
gagctgatggggatgaggaccaagctggagactctcaccaaccagttctcagacagcaaa
cagcacatcgaggtcctcaaggagtcactgaccgctaaggaacagcgctctactatcatt
cagacagaggtggatgctctgcgtctgcgtctggaagagaaagactcccagctgaataag
aagtcgaaccagatccaggagacgtctgaggagaaggggacgctcagcagagaggtacac
gacctcaaggacatgctggaggtcaaggagcgcaaggtcaacgtcctgcagaagaagatt
gagaatctacaggagcagctgagagacaaggagaaacagatgagtagtctgaaggacaga
gtcaggtctctccagacagacacctccaacactgacacagctctcaccaccctggaggaa
gcactggctgagaaggagcgtatcattgagcgtctgaaggagcagagagacagagacgac
agagagaagacagaagacatcgagtccaacaagaaagaactgaaggagctcagagagaaa
ctcagtttactgcagggagacctgtctgaccgagagaccaacctgttagaccttaaggaa
catgcttcgtccctggtctcctccggtctgaagaaggactctaaactgaagagtctggag
atgtcgctggaacagaggaaagacgagttcatcaagatggagaaacaactcaagaaggcc
cagaatgccatgctggaggcccaggccaacacggagctgtcagaacgcatcgttactctg
gaacaggaagtgactcggcacagagaggattctgggaaggcccaggtggaggtggaccga
ttgctggagatcctcagagagatggagaatgagaaaaacgacaaggacaagaaaatcaat
gaactggagaattttgcttcaagacaggtgaaggaccagactaagacggtggcccacctg
aaacataaggagcaggtggagaagagtaagaacgcccagctggtgcaggaggtcaggaag
agagaggacaacctcaatgagagctctcaacacgtcaaggactccctgcgccagaaggag
gagcgaatagaggagctggaggaggctctgagagagagtgtccagatcacagcagagaga
gagatggttctggctcaggaggaagctgctcgcacacacactgagaaacagatggaggag
ctgcttgcggccatggggaaggtgaaactggagctggagtccatgcaggccaagctgtcc
tctacccagcagtcattggctgagaaggaggcccacctgaccacactgagggcagaacgc
aggaaacacctggaggaggtgctggagatgaagtaa
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