KEGG   Oncorhynchus mykiss (rainbow trout): 110513996
Entry
110513996         CDS       T07259                                 
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008  Ribosome biogenesis in eukaryotes
omy03013  Nucleocytoplasmic transport
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110513996
   03008 Ribosome biogenesis in eukaryotes
    110513996
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110513996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110513996
   03009 Ribosome biogenesis [BR:omy03009]
    110513996
   03016 Transfer RNA biogenesis [BR:omy03016]
    110513996
   03036 Chromosome and associated proteins [BR:omy03036]
    110513996
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110513996
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    110513996
  Pre-60S particles
    110513996
Transfer RNA biogenesis [BR:omy03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    110513996
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     110513996
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3 Rap1a
Other DBs
NCBI-GeneID: 110513996
NCBI-ProteinID: XP_036815533
LinkDB
Position
23:3708915..3779869
AA seq 1071 aa
MPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRLAQEVLTQLKEHPDAW
TRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATMV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGKINT
QLNPSNPGNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagccgttatgacagtgttagcagaccatgcagcgcagcagctgctagacttcagc
cagaaactagacatcaacctgttggacaacgtggtcaactgtctgtaccacggggtcgga
acacagcaacggctggctcaggaggttctgacccagctgaaagagcacccggatgcttgg
accagagtggacaccatactggagttctcccagagcatgaacaccaaatactatgctctg
cagattctggaaacagttatcaaaacaagatggaagattctacccagaaaccagtgtgaa
ggtattaaaaagtatgttgttggactaattatcaagacgtcgtcggacgctacaatggtg
gagaaagagaaagtgtacattggaaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccacgttcatcagtgacatcgtgggagccagccgcaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtgtttgac
ttctctagtggacagatgacccaggtcaaggccaagcatctcaaagacagcatgtgcaat
gaattctcccagatattccagctctgccagtttgtcatggagaattcccagaatgcacca
ctggtccacgccactctagaaacgctgctgaggtttctcaattggattcctctggggtac
attttcgagaccaaactcatcagcacactcgtctacaagttcctgaacgtgccgatgttc
cgcaacgtgacgttgaagtgtctgacggagatcgccggcgtcagtgtcagccaatacgag
gagcagtttgtcaacctcttcacgctcaccatgtgtcaactcaaacagatgcttcccctg
aacaccaacattcgtctggcgtattccaacggtaaggatgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaggagcacggtcagctcatcgagaagagg
cccaacctccgagagacactgatggaggctctccactacatgctgctggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccacctggctgcagagctt
tacagggagagtcccttctccacctccacctcccccctgctgtctggatcacaacacttt
gatgtccctcctcgcagacagctctaccttcctgtactctccaaggtgcgtctgctgatg
gtgagccgcatggccaagccggaggaggtgctggtggtggagaacgaccagggagaggtg
gtacgagagttcatgaaggacacagactccatcaacctctacaagaacatgagagagaca
ctggtgtacctgacccatctggactatgcagacacggagcgtataatgacagagaagctt
cataaccaggtgaacggaacagagtggtcctggaagaacctcaacacactgtgctgggct
atagggtccatcagtggagccatgcacgaagaggacgagaagaggttcctggtcaccgtc
atcaaggatctgctgggtctatgtgaacagaagaggggaaaggacaataaggccatcatt
gcctccaatatcatgtacatcgtgggccagtaccctcgcttcctcagagcccactggaag
ttcctcaagaccgtcgtcaataaactctttgagttcatgcacgagacccatgatggggta
caggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgtcgccattttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccacagcaggtccatacgttctacgaggccgtggggtacatg
atcggagcccagacagaccaggcagtacaagagcatatcatagagaaatacatgttactg
cctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtggacattctgaag
gacccagagacggtgaagcagctcggcagcatcctgaagaccaacgtccgggcctgtaag
gccgtgggacaccccttcgttatccagttaggacgcatttatctggacatgctcaacgtc
tacaagtgcctgagcgaaaacatctccgcagccatccagaccaacggagagatggtgacg
aaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctcaaactcatctcc
ggctgggttagcagatccagcgatccacagatggtgggggagaactttgttccgccactg
ctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgggagcccgaggtc
ctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcaccggggagatcccg
cagatcttcgatgccgtgttcgaatgcacgctcaacatgatcaataaagactttgaggag
tacccggaacacaggactcatttcttctacctgctgcaggcggtcaactcccattgtttc
ccagcattcctggccatccctccggcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctctacactcta
ctgcagaacgtgacccaggaagaggctgcagcacagagcttctaccagacatacttctgt
gacatcctccaacacatcttctctgtggtcactgacacatcacacactgctggcctgacg
atgcatgcctccatcctgacctacatgtttaacctggtggaggaagggaagatcaacacc
cagctcaacccctccaaccccggcaacaaccaggtcttcatacaggagtacgtggccaac
ctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtgttcgtaacagga
ctgttcagtctaaaccaggacattgcagccttcaaggaacacctgagggacttcctggta
cagattaaggagtttgcaggggaggacaccacagacctgttcctagaggagcgggaggcg
tcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagttcccggtatcctc
aacccacacgaaatacccgaggagatgtgtgattga

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