Oncorhynchus mykiss (rainbow trout): 110513996
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Entry
110513996 CDS
T07259
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
omy03013
Nucleocytoplasmic transport
omy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110513996
03008 Ribosome biogenesis in eukaryotes
110513996
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110513996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110513996
03009 Ribosome biogenesis [BR:
omy03009
]
110513996
03016 Transfer RNA biogenesis [BR:
omy03016
]
110513996
03036 Chromosome and associated proteins [BR:
omy03036
]
110513996
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110513996
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110513996
Pre-60S particles
110513996
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110513996
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110513996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Rap1a
Motif
Other DBs
NCBI-GeneID:
110513996
NCBI-ProteinID:
XP_036815533
LinkDB
All DBs
Position
23:3708915..3779869
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRLAQEVLTQLKEHPDAW
TRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATMV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGKINT
QLNPSNPGNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgttatgacagtgttagcagaccatgcagcgcagcagctgctagacttcagc
cagaaactagacatcaacctgttggacaacgtggtcaactgtctgtaccacggggtcgga
acacagcaacggctggctcaggaggttctgacccagctgaaagagcacccggatgcttgg
accagagtggacaccatactggagttctcccagagcatgaacaccaaatactatgctctg
cagattctggaaacagttatcaaaacaagatggaagattctacccagaaaccagtgtgaa
ggtattaaaaagtatgttgttggactaattatcaagacgtcgtcggacgctacaatggtg
gagaaagagaaagtgtacattggaaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccacgttcatcagtgacatcgtgggagccagccgcaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtgtttgac
ttctctagtggacagatgacccaggtcaaggccaagcatctcaaagacagcatgtgcaat
gaattctcccagatattccagctctgccagtttgtcatggagaattcccagaatgcacca
ctggtccacgccactctagaaacgctgctgaggtttctcaattggattcctctggggtac
attttcgagaccaaactcatcagcacactcgtctacaagttcctgaacgtgccgatgttc
cgcaacgtgacgttgaagtgtctgacggagatcgccggcgtcagtgtcagccaatacgag
gagcagtttgtcaacctcttcacgctcaccatgtgtcaactcaaacagatgcttcccctg
aacaccaacattcgtctggcgtattccaacggtaaggatgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaggagcacggtcagctcatcgagaagagg
cccaacctccgagagacactgatggaggctctccactacatgctgctggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccacctggctgcagagctt
tacagggagagtcccttctccacctccacctcccccctgctgtctggatcacaacacttt
gatgtccctcctcgcagacagctctaccttcctgtactctccaaggtgcgtctgctgatg
gtgagccgcatggccaagccggaggaggtgctggtggtggagaacgaccagggagaggtg
gtacgagagttcatgaaggacacagactccatcaacctctacaagaacatgagagagaca
ctggtgtacctgacccatctggactatgcagacacggagcgtataatgacagagaagctt
cataaccaggtgaacggaacagagtggtcctggaagaacctcaacacactgtgctgggct
atagggtccatcagtggagccatgcacgaagaggacgagaagaggttcctggtcaccgtc
atcaaggatctgctgggtctatgtgaacagaagaggggaaaggacaataaggccatcatt
gcctccaatatcatgtacatcgtgggccagtaccctcgcttcctcagagcccactggaag
ttcctcaagaccgtcgtcaataaactctttgagttcatgcacgagacccatgatggggta
caggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgtcgccattttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccacagcaggtccatacgttctacgaggccgtggggtacatg
atcggagcccagacagaccaggcagtacaagagcatatcatagagaaatacatgttactg
cctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtggacattctgaag
gacccagagacggtgaagcagctcggcagcatcctgaagaccaacgtccgggcctgtaag
gccgtgggacaccccttcgttatccagttaggacgcatttatctggacatgctcaacgtc
tacaagtgcctgagcgaaaacatctccgcagccatccagaccaacggagagatggtgacg
aaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctcaaactcatctcc
ggctgggttagcagatccagcgatccacagatggtgggggagaactttgttccgccactg
ctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgggagcccgaggtc
ctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcaccggggagatcccg
cagatcttcgatgccgtgttcgaatgcacgctcaacatgatcaataaagactttgaggag
tacccggaacacaggactcatttcttctacctgctgcaggcggtcaactcccattgtttc
ccagcattcctggccatccctccggcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctctacactcta
ctgcagaacgtgacccaggaagaggctgcagcacagagcttctaccagacatacttctgt
gacatcctccaacacatcttctctgtggtcactgacacatcacacactgctggcctgacg
atgcatgcctccatcctgacctacatgtttaacctggtggaggaagggaagatcaacacc
cagctcaacccctccaaccccggcaacaaccaggtcttcatacaggagtacgtggccaac
ctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtgttcgtaacagga
ctgttcagtctaaaccaggacattgcagccttcaaggaacacctgagggacttcctggta
cagattaaggagtttgcaggggaggacaccacagacctgttcctagaggagcgggaggcg
tcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagttcccggtatcctc
aacccacacgaaatacccgaggagatgtgtgattga
DBGET
integrated database retrieval system