Oncorhynchus mykiss (rainbow trout): 110514249
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Entry
110514249 CDS
T07259
Name
(RefSeq) paired box protein Pax-2a-like isoform X1
KO
K15608
paired box protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110514249
04131 Membrane trafficking [BR:
omy04131
]
110514249
03036 Chromosome and associated proteins [BR:
omy03036
]
110514249
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110514249
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
110514249
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110514249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
Motif
Other DBs
NCBI-GeneID:
110514249
NCBI-ProteinID:
XP_036844157
LinkDB
All DBs
Position
1:89588365..89663139
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AA seq
430 aa
AA seq
DB search
MDIHCKVDPFSAMHLSHIGHGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKDFKRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSAPGHTMVPSQASP
PVTSPSNDPVGSYSINGILGIPRSNGEKRKRDEDGSDGSGPNTDSQVSVDSLRKHLRADA
FTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSHSHSLSSLNPGLDGEVKPSLSSS
SNQNLGPSVSVTQSYSVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFTGNPY
SHPQYTTYNEAWRFSNPALLMPHPEVPDHLLLPRHMTATSYHGNQINHHHHYHLHHDYNH
GFGSVHVAPV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagtagacccgttctcagcgatgcacctctcccatatagggcac
ggcggtgtgaaccagctaggcggggtgtttgtcaacggcagacccctacctgacgtggtg
aggacaagaatcgtagaactcgcgcaccaaggagtgagaccctgtgacatttcgagacaa
ctacgggtcagccacggctgtgtcagcaaaatactgggcagctatcaaaaggattttaaa
agatactacgagaccggaagtataaagccaggagttattggtgggtccaaaccgaaagtg
gcgactccaaaggttgtggataaaatagcggactacaagcgccagaatccgaccatgttc
gcgtgggaaatcagagacagactgttagctgagggcgtctgtgacaacgacacggttcca
agcgtctcgtccattaacaggataatacgaacaaaagtccagcagcctttccacccgtct
ccagatggaacatccctgtctgccccaggccacaccatggtaccgagccaggcctctcca
cctgtaacaagcccttccaacgaccctgtggggtcctactccatcaacggcatcctgggt
attccccggtcaaatggcgagaagaggaaacgagatgaagatggttcagatgggtctggc
ccaaacactgattctcaggttagtgtggacagtttacggaagcacctgcgggccgatgct
ttcactcagcagcagctggaagctttggaccgggtctttgagcgcccgtcgtaccccgac
gtcttcccgacctcggagcacatcaaaccagaacaggccaacgagtactcccactcccac
tccctgtcctccctgaatcctggtctggacggcgaggtcaaacccagcctgtcctccagc
agtaaccagaacctgggccccagtgtctctgtgacgcagagctactctgtaggtcgagac
atggccaacacaaccctaccgggttatccccctcacgttccccccaccggccaaggcagc
taccccacctcaacactggccggaatggttcctgggagtgagtttacaggaaacccttac
agtcatccacagtacacgacctacaacgaggcatggcggttcagcaacccagcattacta
atgccacatccagaggttccggaccacctactgctgccacggcatatgaccgccactagt
taccatggaaaccaaatcaaccaccaccaccactaccacctacaccatgactacaaccat
ggcttcggcagcgtccatgttgccccggtgtga
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