Oncorhynchus mykiss (rainbow trout): 110514303
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Entry
110514303 CDS
T07259
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110514303
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110514303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
110514303
NCBI-ProteinID:
XP_021449439
Ensembl:
ENSOMYG00000005152
LinkDB
All DBs
Position
3:complement(22903729..22919447)
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AA seq
822 aa
AA seq
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MCGWDQSFSATSHSSAMLTTEGAHTVEHDNVKMDTEPHRDTETQMDTRSKMATDTDSKME
EADMMKWTEVEFEEKCTYIVKDTPREAGTESKGLTRAEASLPRNLAFKQLADSKEVIGVA
SREYIPKGTRFGPLVGQSYTADSVPKDANRKYFWRIYSEGDFHHFVDGLDEERSNWMRYV
NPIHSAGEQNLAACQNGTNIYFYTVRAIPPGTELLVWYCPEFALRLHYLPSEELMMQKLK
QSLLEAKQQASEEHVSSSSAPVKIEHSVSSILGGPTTSSKKEPSRPLATRPRCALYPPFR
PHPHLTEEFLSLKTSPVQFCYTVIRSPGNQSSATPSPSARSSPESSPDGSPAAPQPTHQS
SSFYSRGLGPYPGYSPPAAPLSSPFYPPGPHYSRYMLPHHYPLPGGGVPAVGGMFPRMYP
LFSSLLPPNMPLLPGEAGSRFLLPNSSHPSFSTHRDFLLSATTSAFSAATTLGDKAGPHY
PHHPYSGNDHPHPHGHPHAPTSGSPTAGTAAPSEHMPTKPTSALLGSASGRQEEAMNLSK
MKRGGGSTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCSTCS
KGFTQLAHLQKHFLVHTGEKPHECSVCHKRFSSTSNLKTHLRLHSGEKPYLCKLCPAKFT
QFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLQLHLKGYCLAAVTSSGGPTPSPSTQEE
LQRINEEIERFDMSDHAERLDQLQGGVEVEAVLEKQVLGMLWREMDLKTSGYHHHKGGAS
ELQSTGYGLYNSVNETSVIKLRRSSPLLPSNVTIKQESEEQA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttctcggctacctctcatagctcggccatgttgactact
gagggggcccacactgtagagcacgacaacgtcaagatggacaccgaaccccatagggac
acggaaacccagatggacacgagatccaaaatggccaccgacacagactctaagatggag
gaggcggacatgatgaagtggacggaggtggagtttgaggagaagtgtacctacatcgtc
aaggatactccgcgggaggcagggacagagagcaaggggttaacgagagcagaggcctca
ctgcctcgtaacctggccttcaaacaactagctgattccaaagaggtgattggagtggcc
agcagagagtacatccccaaaggaacacgcttcggccccctggtgggtcagagctacact
gcagacagcgtccccaaagacgccaacaggaagtacttctggaggatctactcggagggc
gacttccaccactttgtggacggcctggacgaggagcggtctaactggatgcgctacgtc
aacccgatccactcggcgggggagcaaaacctggcggcgtgccagaatggcacgaacatc
tacttctacacggtgagggccatcccccctggcaccgagctgctggtgtggtactgccca
gagttcgctctccgcctccactacctgccttctgaagagctcatgatgcagaaactgaag
cagtctctgctggaagccaagcagcaggccagtgaggagcatgttagcagcagcagcgcc
ccagtcaagatagaacacagtgtctcctccatcctcgggggccccaccacctctagcaag
aaggagcccagccggccactggccacgcgaccccgctgtgccctctaccccccattccgc
ccccaccctcatctaacggaagagttcctgagccttaagaccagcccggtacagttttgt
tacacagtaatcagatcaccaggcaaccagtcgtcggcgaccccgagtccgtcggcgcgg
agcagtccggagagtagccccgatggtagccccgcagctccccaacccacacaccaatcc
tcctctttttactcccgaggtttgggtccctacccaggctattctccaccagccgccccc
ctttcctcgcccttctaccctcccggcccccactattcccgctacatgctaccccaccac
tacccactacctgggggtggggtgcccgctgtcgggggaatgtttccaagaatgtaccct
ctcttcagcagcctgctgccccccaacatgcccctgctgcctggggaggcggggagcagg
ttcttactacctaactcctcccacccctcattctccacccaccgggacttcctcctctcc
gccaccaccagtgccttctcagccgccaccaccctcggggacaaagccggcccccactac
ccccatcacccctactctggcaatgatcatcctcacccacacgggcacccccacgccccc
accagcggctcacctacagcgggcacggcggcccctagcgagcacatgcccaccaagcct
acctcagccctactgggcagtgccagcggccggcaggaggaggccatgaacctgagcaag
atgaagcgtggtggtggctctacaggctacaagaccctgccttacccactcaagaagcag
aacggcaaaatcaagtacgagtgtaacgtctgcagcaagaccttcggccagctctctaac
ctcaaggtgcacttgcgtgtccacagcggtgagcggcccttcaagtgttcgacctgcagt
aaaggcttcacccagctggcccacctgcagaaacacttcctggtgcacactggagagaag
ccccatgagtgctcggtgtgccataagcgcttcagcagcaccagcaacctaaagacccac
ctgcgcctccactcgggtgagaagccctacttgtgcaagctctgccctgccaagttcact
cagtttgtccacctgaagctgcacaagcgccttcactcccgcgagcggccacacaagtgc
ccccactgccaccgccactacattcacctgtgcagcctgcagctacacctgaagggctac
tgtctggctgccgtcacctcctcaggtggccccacccccagcccctccacccaggaagag
ctccagcgcatcaatgaggagattgagcgcttcgacatgagcgaccacgctgagaggctg
gaccagctccagggaggggttgaggttgaggctgtcctggagaagcaggtcctggggatg
ctgtggagggagatggacctcaagacctccggctaccaccaccacaagggcggcgccagt
gagctccagtctacaggttacggcctctacaattcagtcaatgagacgtcggttatcaaa
ctgcgccgaagcagtccgcttcttccttccaacgtcacgatcaagcaggagtctgaggaa
caggcttga
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