Oncorhynchus mykiss (rainbow trout): 110514319
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Entry
110514319 CDS
T07259
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110514319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110514319
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
U1 related factors
110514319
Complex B
110514319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110514319
NCBI-ProteinID:
XP_036811261
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All DBs
Position
19:63648369..63719010
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AA seq
873 aa
AA seq
DB search
MSYPPHLNRLPQLPPGIRPPHFAGFPQGVPAGTPMIPVHMGIMTSAPTVLVPTTVSMVQK
PPAQRKELNPVRAKENQEGGSGPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQGA
SGKLQGKNKTAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKARKR
NSNGGAMSEDGLKEEEEEEEEEDLDEDTKRRDQIVKGAIEGLIREYGSELNAPSQDGDNQ
PRKKKREKKEEEDINVMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRR
ERDKERERERERRDREREKEKERNDNIKERERDRDRDRIDRERERTKERERERGERERGE
RERGERERGERERGERERVKERSREVSKDRSKSRERSRDEKKHDREEDQEEAYERRKLER
KMRDKETAYQERLKNWEIRERKKARDYDKENQREEERRHEMTKEAKRLKEFLEDYDDDRD
ESKYYRGSALQKRLRDREKETELDDRDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEE
AERRRQPPVKPEEEVQQEKPHREREHREHREREHREREHHRDRRGGGGGGGADRPPPEHP
QSQSDDDVEDGEELDDRDGDDSSDARTHPHLKPTLRPITSAPSVSSGSGGATPNSPGNES
PCGIIIPHENSPDAQPTDEHRPKIGLSLKLGAGASPSHQVHTGSKRKKLANVDSVFNKFG
EEEADEAPRKRKLVPLDYGEDDKSLGLDGAEVPGGKGGQNTEEKRKHIRSLIEKIPTARP
ELFNYPLDWTAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMSHGTPQGILDD
VAMVLDEEAEVFIVKMWRLLIYETEAKKIGLGK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggattcgccctccc
cacttcgcagggttcccccagggagtcccagcaggtacacccatgattccagtccacatg
gggataatgacctctgcacctacggtcctggttcctaccacagtgtctatggtccagaag
cctcctgctcagaggaaagagctgaacccagtcagagccaaggagaaccaggaggggggc
agtggtcccaccaccacagtgtttgtagggaacatctccgagaaggcttcagacatgctg
gtcagacagctgctagcgaaatgtggcctggtcctgagctggaagagggtccaaggggct
tctgggaaactgcaaggtaaaaacaaaacagcgtttggtttctgtgagtacaaggagcca
gagtccaccctgcgttccctgcgtctgctacacgagctgttgctgggagacaagaagctg
ctggtcaaggtggatgctaagaccaaggcccagcttgaagaatggaaggctaggaagagg
aactccaacgggggagccatgtcagaggacgggctcaaggaggaggaagaagaggaggag
gaggaggatcttgatgaggacacaaagcgccgtgaccagatagtgaaaggggccatcgag
gggttgatccgggagtacggcagtgagctcaacgccccttctcaggacggagacaaccag
ccccgcaagaagaagagagagaagaaagaggaggaggacatcaatgtgatggagatggag
gatgacaaaagagacctgatatccagagagatctctaagttccgggacactcacaagaaa
ctggaggaggagaagggtaagaaagagcaggaacggcaagagatcgataaggacaggagg
gagagggacaaagagagggagcgagagagggagcgccgggaccgcgagagggagaaggag
aaggagagaaacgacaacatcaaggagagagagcgggacagagaccgggaccgcatcgat
cgggaacgtgaacggacgaaggagagagaaagggagaggggagagagggaacgaggagag
agggaacggggagagagggaacgaggagagagggagcgaggagagagggaacgcgtgaag
gagcggagtcgagaagtcagcaaagaccgcagtaaatccagagaacggagccgcgatgag
aagaaacacgaccgcgaggaagatcaggaggaggcgtacgaacgcaggaaactggagagg
aagatgagggacaaggagactgcttaccaggaacgtctgaagaactgggagatcagggag
aggaagaaggctcgggactacgacaaagagaaccagagagaggaggagagacgccatgag
atgaccaaagaagccaagcgtctgaaagagttcctggaagattatgacgatgacagagat
gagtccaaatactacaggggtagtgctttacagaaacgtctgagagaccgtgagaaggag
acggagctggatgatagagaccggaagagggagaaggaggagcatgatcagatcagacag
agactgttagctgagggacacccagaccctgaggccgagctgcagaggatggaggaggag
gcagagcggaggcggcagcccccagtgaagccggaggaggaggtgcagcaggagaaacca
cacagggagagggagcacagggagcaccgagagagggagcaccgagagagggagcaccac
agggacaggagaggaggaggaggtggtggaggtgcagacaggcctcctcccgaacaccct
cagtcccaatcagacgatgacgtggaggatggagaggagcttgacgatcgtgacggggac
gactcgtcagacgccaggacacacccacacctcaagcccacactgcggccaatcacgtcg
gcaccctctgtgtcgtcgggcagcggcggcgccacgcccaactcccctggcaacgagtct
ccgtgtggcatcatcattcctcatgagaactctccagacgcccagcccacagatgaacac
cggcccaagataggcctcagcctcaaactgggagccggcgccagccccagccatcaggtc
cacactgggagtaaacgtaagaagctggccaacgtcgacagcgtcttcaacaagttcggc
gaggaggaggccgacgaggcgcctcgtaaacgtaagctggttccgctggactacggcgag
gatgataagagcttgggtctggacggggcagaggtacccggagggaagggaggacaaaac
acagaggagaaacggaaacacatcaggagtctcattgagaagatccctacagccagaccg
gagctgtttaactaccctctggactggactgctgtggactcgactctgatggaccgtcgc
atcagaccctggatcaacaagaagattatagaatatatcggagaggaggaagctacgcta
gtcgacttcgtttgttcgaaggtcatgtctcacggcacaccgcaggggatcttggatgat
gttgccatggttctggacgaagaggccgaggtgttcatagttaaaatgtggaggctgttg
atctacgaaacggaggccaagaagattggcctggggaaatga
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