Oncorhynchus mykiss (rainbow trout): 110514333
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Entry
110514333 CDS
T07259
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110514333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110514333
03036 Chromosome and associated proteins [BR:
omy03036
]
110514333
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110514333
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110514333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
110514333
NCBI-ProteinID:
XP_036801281
LinkDB
All DBs
Position
15:complement(74806009..74876319)
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AA seq
927 aa
AA seq
DB search
MCHGRDQNELLSPIVRDAEVTRAARRKSSVQKKAQFNFLSPRDDNQGSTTTPARSLPCYT
PGSLFKQSFTPKSAARNPDVSAILGTGRRTPRFIHTPRPPLGTMSMNLDDSDWTNSLYPS
PLSGLGLGDTSFTDDINMSSVMLKEEDPGEAASVSLFPEFLQSYLRHSSTAVFDLLGEYE
AICQDKVGMLQRLVSRAAPGQQKSSKTAGMRWLLQQEMVTWRLITSLYRDRIQSELEDDI
MMDVAAPGVSEKVVMEQLFQRDAVVRQSQLVVDWLESIAKDEIGDFSDNIEYYAKSVYWE
NTLHALKLRRNTSSTGFNVPLVTELDPDAPIRQRRPLADLDREDDARLLKYLFTLLRAGM
TDEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGAELLPVEGNPQRCVWKVCCWRMADN
EHFSRYERAIYAVLSGNLKRLLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGMGSEELEE
LPREYLEANWTLEKVFEELLATESKKVLEETKEHYHIIQKLVILGDLDGLLEEFSNWLTR
SPALPSHLLRFMTHLVLFYRSLGMQLKEEVSVDVLKAYISLLMREKHVDLIAFYVSHLPP
DLATAQYALFLEEVTEAEQRQRCLELAREAGLDVAAVTKMVVENIRERDTEEFAHHDLTP
ALDTVTSAEDQRKIDVIDWLVFDPAQRAEALKQSNAIMRKFLACKKHQAAKVVFGKVPED
SMREIYRQWEELGLDTPLPAEDENAIREHLCVRAYLEAHEAFNEWFHHMNSPPQKPSLPA
QAKFTEKVAYEMKENEYQLEHDSWTGRLGALTEDVKERIYNVLLFVDGGWMVDVREDTEE
DPERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQESLRLADIIASDQHRLYEVFSKDELR
KFLQKMRESSLLLLDKGLDPLGYEIQP
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatggcagggaccagaatgagttgctgtcgcctattgtacgagatgccgaagtg
accagagcagcacgccgaaagagttcagttcagaagaaggctcaattcaacttcctttct
cctcgtgatgacaaccaaggtagtaccaccacacctgcccgttccctgccctgctacaca
cctggatccctcttcaaacagtccttcaccccgaagagtgctgctaggaacccagatgtg
tcggccatcttggggacagggcgcaggactcctcgtttcatccatacgccacgacctccc
ctgggcactatgagcatgaacctggatgacagtgactggaccaacagcctgtacccgtct
cctctgtccggcctgggactgggggacaccagctttactgacgacatcaacatgtcctct
gtaatgctgaaggaggaggatcctggagaggctgcgtcagtcagtctgttcccagagttc
ctccagtcctatctcagacactcctccactgctgtctttgacctgctgggggagtatgaa
gccatctgtcaagacaaggtgggcatgctccagaggctggtatcgagggcagctccaggg
caacagaagtcctctaagactgctggtatgagatggcttttacagcaggagatggtcacc
tggcgcctcatcacttctctatacagagacaggatccagtcagagctggaggatgacatc
atgatggatgtggctgctcccggtgttagtgagaaggtggtgatggaacaacttttccag
agagatgctgtagtacgccagagtcagttggttgtggattggttagagagtatcgccaaa
gatgaaatcggggacttctccgacaacattgaatactacgccaagtctgtctactgggag
aatacccttcatgctctgaaactgaggagaaacacatccagcacaggcttcaatgttccc
ctggttactgagctggaccctgacgcccccatcagacagagacgtcccctggcagacctg
gacagagaggatgatgccagactgctgaagtacctcttcaccctcctcagagcgggcatg
acagacgaggcccagaggctgtgtaagcgctgtggccaggcatggagagctgctactctg
gagggatggaagctgtaccacgaccccaacatcaacggaggcggggcagagctgctaccg
gtggaggggaaccctcagcgctgtgtgtggaaggtctgctgctggaggatggctgataat
gaacacttcagcagatatgagagagccatctacgctgttctgagtgggaacctcaaacgg
ctgctcccagtgtgtgagtcgtgggaggacagtgtgtgggcctacttcagggtcctggta
gactctcttgtggaacaggaggtccggtcctcagggatgggcagcgaggagctggaggag
ctgccacgagaatacctggaggccaactggacactagagaaggtgtttgaggagctgctg
gcaacagagtcaaagaaagtcctggaagagacgaaagaacactaccacattatccagaag
ttagttatcctgggtgacctggacggtctgttggaggagttcagtaactggttgaccagg
agtcctgctctgccctctcacctgctgcgcttcatgacacacctggtgttgttctaccgc
agcctgggcatgcagctcaaggaggaggtatcagtggatgtcctgaaggcctacatctct
ctgttgatgagggagaagcacgttgatctgatagccttctatgtcagtcacctgccgcca
gacctggccaccgcccagtacgctctcttcctggaggaggtcaccgaggctgagcagaga
caacgctgtctggagctggccagggaggcaggtctggacgtggcagcggtcactaagatg
gtggtggagaacatcagagagagagacactgaggagttcgctcatcatgacctcacccct
gcactggacaccgtcacctcagcggaggaccagaggaagatcgatgtgattgattggctg
gtgtttgaccccgcccagagagctgaggccctcaaacagagcaacgccatcatgaggaag
ttcctggcctgtaagaaacaccaggcagctaaggtggtgttcggtaaggtccccgaggac
tccatgagggagatctaccgccagtgggaggagctaggcctggacacgccccttcccgcg
gaggatgagaacgccatcagggaacacctgtgtgttcgcgcttacctggaagctcatgag
gcgtttaatgagtggttccatcacatgaactccccccctcagaagcccagcctgccggct
caggccaagttcactgagaaggtggcctacgagatgaaggagaacgagtaccagctggaa
catgacagctggaccggccgtctgggggctctgactgaagacgtgaaggagaggatctac
aacgtcctgctgtttgtggacgggggctggatggtcgacgtcagagaggatacggaggag
gacccagagagaggccaccagatggtgctgcttcgtagactctgtctgcccatgatgtcc
ttcctgttgcagacagtactgcagagaacacaacgccaccaggagagtctcagactggct
gatatcatcgcctcggaccaacaccgcctctacgaggtgttctccaaggatgagctgagg
aagttccttcagaagatgagggagtcatctcttctcttattggataagggtctagacccg
ctggggtacgagatccaaccataa
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