Oncorhynchus mykiss (rainbow trout): 110514579
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Entry
110514579 CDS
T07259
Name
(RefSeq) rho GTPase-activating protein SYDE1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110514579
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
110514579
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2_SYDE
RhoGAP
DUF5024
Motif
Other DBs
NCBI-GeneID:
110514579
NCBI-ProteinID:
XP_036845030
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Position
1:94522396..94559917
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AA seq
825 aa
AA seq
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MRSQRRAGMVVSPGTGGGGGASRLERHATQNQCPSGGSSLDSAHQTKAITLDSSACSRRD
RDVDSPDVIQQIQSEELQSFGVAGGEVGVSSSGGGVSVPSDSPGAQKKGGVASSMMDRIK
SPGMVRKSLSMKMKKLPELRRKLSLRSSRSHRHGKEGTGRGGGDGGGEGTSPPDVRKEQS
NEVISRYHLDTSAPARPQRRSSRGRSSAASKGGYLSDGDSPELLPKQGGPGGPCSAHNPP
LPPPRSTHHSSQEGVTMTSDLSSFRVYNLSDQPRCAQRVSGLLTVHLVGVEKLLRAPKQD
TSKEVFCAIQVDGVTRARTGLLTSRGGSLPLNHTFNLELERARLLKLVVLTPYPGAETST
TKGSDSTAATRNRVCCLGAVSIPPLFKASRSQQICVRLEPRGLLYVKLTLLEQWEPPDPR
PCHLNPPMVFGVELRHLVDKENTAAPVPLLIQKSVAEIQKRGLRVVGLYRLCGSAAVKKE
LRDAFERDSAAVSLNEEVYPDINVITGILKDYLRELPSSLITRTLYEVVLEAMSLRPPPS
RSSPGTSSPGRSEGDVQRSQSTVALLQCLPEPERATLSLLLDHLSLVASYSDCNRMNCQN
LAVCFGPVLLTPTQESWRPTAPGQGGQGGRGGSCGRGGRSFAHSEEIASAVDFKRHIEAL
HYLLQLWPIPTDRVTDNPDSPTLLQPSSSSDMPPSPPSPMPHNPLPRRCQRGLSLPLPGD
EVGVVSRRGRGRLESPPCNRYAGDWSVCGRDFLSGGDADYDEVAGSDSEEEEEEREVKKV
EWTQYVDDLVLDFDAPFTCRLSLKDFDTLISDLERELSKQINICL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccagcggcgggcagggatggtggtgagccctggcaccggtggaggaggaggg
gcctcccgtttagagcgtcatgccacccagaaccagtgcccttcaggtggctccagccta
gacagcgcccatcagaccaaagccatcacattagacagctcagcctgcagtaggagagac
agagacgtagacagcccagatgtaattcaacagatccagagtgaggaactgcagtctttc
ggggttgcaggtggagaagtgggtgtttccagctccggaggaggtgtgtcagtcccctca
gacagccccggggcccagaagaaagggggcgtggccagcagcatgatggacaggatcaaa
tccccaggaatggtccggaaatccctttccatgaagatgaagaaactccccgaactccgc
cgtaaactcagcctgcgctcctcgcgctcccatcgccatgggaaggaggggacgggccga
ggaggaggggacgggggtggagaggggacatcacccccagacgtccgtaaggagcagtcc
aacgaggtgatcagcaggtaccacctggacacttcggccccggcgagaccacaacgacgc
tcctccaggggacgttcctctgccgccagtaaggggggctacctgagcgacggagactca
cctgagctgctgcccaaacagggtggaccagggggaccctgctcggcccacaacccccct
cttccaccaccccgctccacccaccactccagccaggagggagtgaccatgacctctgac
ctgagctcgttcagagtctacaacttgtcagaccagccacggtgcgcccagcgcgtttcc
ggcctgcttacggtgcatctcgttggggtggagaaactgctgagggcccctaaacaggac
accagtaaggaggtgttctgtgccatccaggtggatggtgtaaccagggcccgtaccggc
ctgctaacctccagggggggctctctgcccctcaaccacacctttaacctggagctggag
agggccaggctgctgaaactggtggtgctcaccccttaccccggggctgagacctccacc
acgaagggcagcgactccacagcagcgaccaggaacagggtctgctgtctgggggctgtg
tccataccccctctgttcaaagcctctcggtctcagcagatatgcgttagattagagccc
aggggtctactgtacgtgaagctgaccctgctggagcagtgggagcccccagacccccga
ccctgccacctcaacccccccatggtgtttggagtggagctgcgccacctggtggacaag
gagaacaccgctgccccagttcctctgctcatacagaagagtgtggctgagatccagaag
agaggactgagggtggtgggtctgtaccgtctgtgtggttcagctgcagtgaagaaggaa
ctgagagatgcgtttgagagggacagtgctgctgtcagcctgaatgaagaggtttatcct
gacatcaacgtcatcacaggcattctgaaggactacctacgtgagctgccgtcctccctt
atcaccaggaccttgtacgaggtggttttggaggccatgtctctgagacctcctccttct
cgctcctcccctggaacctcctctcctggcaggagcgagggagacgtacagcgctctcag
agcaccgtggccctactgcaatgtctgcctgaaccagagagggccaccctctcgctgctc
ctggaccatctgagccttgttgcctcctacagtgactgtaaccgaatgaactgtcagaac
ctggctgtgtgttttggcccggtgctcctgacccccacccaggagtcctggagacccact
gcaccaggacagggcgggcagggcgggcgcggggggagctgtggaaggggtggacggagt
tttgctcacagcgaggagattgccagtgctgtggacttcaagagacacatcgaggccttg
cattacctgttgcagctctggcccattcctacagacagagtgacagacaaccccgactct
cccaccctcctccagccctcctccagttcagacatgcctccttcccctcccagccccatg
ccccataaccccctgcctcggcgctgccagcgtggcctgtcgctgcctctaccgggggac
gaagtgggcgtggtgtcgcgacgtggacggggccgactggagagcccgccctgtaaccgg
tatgctggcgactggagcgtgtgtgggcgggacttcctgtccggaggcgatgcggactac
gatgaggtggcagggagcgacagtgaggaagaggaggaagagagggaggtgaagaaggtg
gagtggactcagtacgtagacgacttagttctggactttgacgccccgtttacctgcaga
ctgagtctcaaagactttgatacgctgatatcagacctggagagagagctgtccaaacag
ataaacatctgtctctga
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