Oncorhynchus mykiss (rainbow trout): 110514914
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Entry
110514914 CDS
T07259
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110514914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110514914
03051 Proteasome [BR:
omy03051
]
110514914
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
110514914
Proteasome [BR:
omy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110514914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
UBA_7
YukD
Rad60-SLD_2
UBA_HOIP
Dsc3_N
CUE
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
110514914
NCBI-ProteinID:
XP_021449726
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Position
3:complement(24336724..24342873)
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AA seq
592 aa
AA seq
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MAENSGTDPTVDSNVVENAASDGTMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKATVGGTSQSSASSSGTPQAN
SSVNPSAAPNDSTTPGTGPTPTSTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAL
GGNLDSGVQPSRTENREPLPNPWGPPGTTPSEIRGTGASTTTTTSAGGTAPSASNPLGIN
ASGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDLASQAMLNNPL
FAGNPQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGGIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGGSS
TQTVTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacagcggcacagatcccactgtggattccaacgttgttgaaaatgctgcc
tcagacgggaccatgattgtggtcacggtaaaaactccgaaagataaagaggagatcgcg
atatcggaagattcttctgtcgcacagtttaaagaggagatatccaaaaggtttaatgcc
aagcaggaccagctggtgttgatttttgctggaaaaatcttaaaggatggagacacactg
aaccaacacggcatcaaggacggactcactgttcacctagtcatcaagactgctcccaag
gctacagttggtggcacatcccagtcctcggcatccagctctgggaccccccaggccaac
agcagcgttaaccccagcgcagcgcccaatgacagcacaacaccaggcactgggcctacc
ccaacctccacacagccacccaacttactgagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcggccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcagatcatggacaaccctttggtgcagaacatgatg
tccaacccagacctgatgaggcagatgattgtgacaaaccctcagatgcagcagctgatg
gagcgcaaccctgagatctcccacatgctcaacaaccctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatccctgggggctacaacgccctccggaggatgtacacagacatc
caggagcctatgttcagtgccgctagagagcagtttggaaacaatcccttctctgctttg
gggggcaacttggactctggcgtgcagccctccagaacagagaacagggagcccttacca
aacccctggggaccccctggaacgaccccctcagagatcagggggactggtgcctccacg
acaacaacaacctctgctggcgggactgcacccagtgcctccaaccccctgggcatcaat
gcctctgggctgggcaacggtgtgttcggtagccctggcatgcagagtctgatgcagcag
atctctgagaacccccagctgatgcagaacatgctgtctgcgccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgacctcgcctcgcaggcaatgctgaacaaccccctc
tttgccggaaacccccagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtctgtgatgactaacccccgggccatgcaggctctc
atgcagatccagcagggcctgcagaccctacagacggaagccccaggactcatgcccagt
ttggctcctggtgggatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aatcttcctcccccaacacagggctcaaatcccactgctgccactaacccatcccaacag
cagcagcagctcatgcagcagatgttacagatgtttgctggaggaggaggcggctcatcg
acccagaccgtaaccccggaggtgcggtttcagcagcagctggaccagctcagcgccatg
ggcttcatcaaccgtgaggccaacctgcaggccctcatcgccacggggggagacatcaac
gctgccattgagagactgctgggctcccagccctcctaa
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