Oncorhynchus mykiss (rainbow trout): 110514932
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Entry
110514932 CDS
T07259
Name
(RefSeq) nectin-1-like isoform X2
KO
K06081
poliovirus receptor-related protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110514932
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110514932
04517 IgSF CAM signaling
110514932
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110514932
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110514932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110514932
04090 CD molecules [BR:
omy04090
]
110514932
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
110514932
CD molecules [BR:
omy04090
]
Proteins
110514932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
110514932
NCBI-ProteinID:
XP_021449732
Ensembl:
ENSOMYG00000036361
LinkDB
All DBs
Position
10:4430844..4449947
Genome browser
AA seq
503 aa
AA seq
DB search
MENSVLWIFLTATCVIKGVCSQSVQMEAGQSGFVGSKVDLPCLFINSIPPVKISQVTWQK
VINGKKQNVAIANPSLGVSVAPPFKDRVSFKNPVVRRRTPSLEDTTLTFSSLRLSDEARY
ICEYTTFPAGNRENTVNLTVYARPLTQMSLSTPTLVARSSNLKTPVATCLSANGKPPGTI
RWDTRVRGEATTQEIRNSDGTITVRSDFILVPSKNTHLEKLTCITSYNQETYTDSVTLDI
QYEPEVSVEGFDGNWYLDRQNVELTCLTDANPPVSLFQWRMLNGSIPNSVEIRDNVLLFK
GPIRYEVGGTYVCDATNSIGTSSAFMEISITEEPLPQVGTGDVFSVLGMLLAVGLILGVA
ITVLLLNRRKQREEMDADSTDSAPSLKLAPPPARRKPGDEFQRSGRVYEDLPNTADYVSY
RLACNKDDYPEPYSPPINPPLSLPDSPPINPPLSFLSQHAYTHSNNTFSPASHPSSVFRY
PSLPSLSPPPGLAPYTFPKEQYV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctgtgttgtggatattcctgacagcaacatgtgttattaaaggtgtgtgt
agtcagtcagtccagatggaagctggacagtcaggtttcgtgggctctaaggtggatcta
ccatgtctttttattaacagcatcccacctgtcaagatctcacaggtgacatggcagaag
gtgattaatggaaagaaacagaacgtggcgatagctaacccgtctctaggcgtgtctgtg
gctccgcccttcaaagacagagtcagcttcaaaaaccctgtggtgcggaggagaactccg
tccctggaggacaccactctgaccttctcgtctctgcgactgtctgacgaggccagatac
atctgtgaatacactaccttccctgctggcaaccgtgaaaacacggtcaacctcacagtc
tacgcccgacctttgacccagatgagtttgtcgacacccacactggtagctcggtcatcc
aatctgaagacgccggtcgccacctgcctctcggccaatgggaagcctccaggaaccatc
aggtgggacacgcgtgtgcgtggtgaggcgaccacccaggagatccgtaactctgatggg
acgatcacagtgcgaagcgactttatcctggtacccagcaagaatacacacctggagaaa
ctcacctgtatcacctcctataaccaggagacatacaccgactctgtcacgctggacata
cagtatgaaccagaggtgtcagtggaggggttcgatgggaactggtacctggaccgtcag
aacgttgagctcacatgtctaaccgatgccaacccacctgtctctctgttccaatggaga
atgttgaatggttccataccgaacagcgtagagatccgtgacaatgtcctgttatttaaa
ggaccaatcagatacgaggtaggagggacttacgtctgcgatgcaaccaatagcatcggg
acaagctctgccttcatggagatcagcatcacagaagagccactgccccaggtgggaacg
ggtgatgtcttcagtgttctgggcatgctattggctgtggggctgattctgggcgtggcg
atcactgtgctgcttcttaacaggagaaaacagagggaagagatggatgctgactcgaca
gactctgctccttctcttaaactggctcctcctcctgccaggagaaaacctggtgatgag
ttccagcggtcagggagggtgtatgaggacctccccaacacagcggactatgtcagctac
cgactggcctgtaacaaggatgactacccagaaccctactctccccccatcaaccctccc
ctctccctccccgactctccacctatcaaccctcccctctccttcctctcccagcacgcc
tacacccactccaacaataccttctcccccgcctcccatccctcctctgtcttcagatat
ccttccctcccctccctatccccccctcccggccttgcaccctacaccttccctaaagaa
cagtatgtctga
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