KEGG   Oncorhynchus mykiss (rainbow trout): 110514932
Entry
110514932         CDS       T07259                                 
Name
(RefSeq) nectin-1-like isoform X2
  KO
K06081  poliovirus receptor-related protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266  Virion - Herpesvirus
omy04514  Cell adhesion molecule (CAM) interaction
omy04517  IgSF CAM signaling
omy04520  Adherens junction
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    110514932
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110514932
   04517 IgSF CAM signaling
    110514932
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110514932
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110514932
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110514932
   04090 CD molecules [BR:omy04090]
    110514932
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  Nectin family
   110514932
CD molecules [BR:omy04090]
 Proteins
  110514932
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 I-set ig Ig_PVRIG
Other DBs
NCBI-GeneID: 110514932
NCBI-ProteinID: XP_021449732
Ensembl: ENSOMYG00000036361
LinkDB
Position
10:4430844..4449947
AA seq 503 aa
MENSVLWIFLTATCVIKGVCSQSVQMEAGQSGFVGSKVDLPCLFINSIPPVKISQVTWQK
VINGKKQNVAIANPSLGVSVAPPFKDRVSFKNPVVRRRTPSLEDTTLTFSSLRLSDEARY
ICEYTTFPAGNRENTVNLTVYARPLTQMSLSTPTLVARSSNLKTPVATCLSANGKPPGTI
RWDTRVRGEATTQEIRNSDGTITVRSDFILVPSKNTHLEKLTCITSYNQETYTDSVTLDI
QYEPEVSVEGFDGNWYLDRQNVELTCLTDANPPVSLFQWRMLNGSIPNSVEIRDNVLLFK
GPIRYEVGGTYVCDATNSIGTSSAFMEISITEEPLPQVGTGDVFSVLGMLLAVGLILGVA
ITVLLLNRRKQREEMDADSTDSAPSLKLAPPPARRKPGDEFQRSGRVYEDLPNTADYVSY
RLACNKDDYPEPYSPPINPPLSLPDSPPINPPLSFLSQHAYTHSNNTFSPASHPSSVFRY
PSLPSLSPPPGLAPYTFPKEQYV
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggagaattctgtgttgtggatattcctgacagcaacatgtgttattaaaggtgtgtgt
agtcagtcagtccagatggaagctggacagtcaggtttcgtgggctctaaggtggatcta
ccatgtctttttattaacagcatcccacctgtcaagatctcacaggtgacatggcagaag
gtgattaatggaaagaaacagaacgtggcgatagctaacccgtctctaggcgtgtctgtg
gctccgcccttcaaagacagagtcagcttcaaaaaccctgtggtgcggaggagaactccg
tccctggaggacaccactctgaccttctcgtctctgcgactgtctgacgaggccagatac
atctgtgaatacactaccttccctgctggcaaccgtgaaaacacggtcaacctcacagtc
tacgcccgacctttgacccagatgagtttgtcgacacccacactggtagctcggtcatcc
aatctgaagacgccggtcgccacctgcctctcggccaatgggaagcctccaggaaccatc
aggtgggacacgcgtgtgcgtggtgaggcgaccacccaggagatccgtaactctgatggg
acgatcacagtgcgaagcgactttatcctggtacccagcaagaatacacacctggagaaa
ctcacctgtatcacctcctataaccaggagacatacaccgactctgtcacgctggacata
cagtatgaaccagaggtgtcagtggaggggttcgatgggaactggtacctggaccgtcag
aacgttgagctcacatgtctaaccgatgccaacccacctgtctctctgttccaatggaga
atgttgaatggttccataccgaacagcgtagagatccgtgacaatgtcctgttatttaaa
ggaccaatcagatacgaggtaggagggacttacgtctgcgatgcaaccaatagcatcggg
acaagctctgccttcatggagatcagcatcacagaagagccactgccccaggtgggaacg
ggtgatgtcttcagtgttctgggcatgctattggctgtggggctgattctgggcgtggcg
atcactgtgctgcttcttaacaggagaaaacagagggaagagatggatgctgactcgaca
gactctgctccttctcttaaactggctcctcctcctgccaggagaaaacctggtgatgag
ttccagcggtcagggagggtgtatgaggacctccccaacacagcggactatgtcagctac
cgactggcctgtaacaaggatgactacccagaaccctactctccccccatcaaccctccc
ctctccctccccgactctccacctatcaaccctcccctctccttcctctcccagcacgcc
tacacccactccaacaataccttctcccccgcctcccatccctcctctgtcttcagatat
ccttccctcccctccctatccccccctcccggccttgcaccctacaccttccctaaagaa
cagtatgtctga

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