Oncorhynchus mykiss (rainbow trout): 110515557
Help
Entry
110515557 CDS
T07259
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110515557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110515557
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
GTPases
110515557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
RsgA_GTPase
WH2_Lhr
Motif
Other DBs
NCBI-GeneID:
110515557
NCBI-ProteinID:
XP_036819092
LinkDB
All DBs
Position
26:43439260..43535306
Genome browser
AA seq
1148 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYASGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDIKPAECPGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSQRMGIRAEVLLKTLWGDFYLNAKAKKIMKGAHAKGKKPL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDSRHSDPKVLLSAICSQWLPV
SQAVLFMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFMVDAKALPQNKQRPLTQEEMGQRRELARQRHTERLAAIQQTESGEGNAQSGST
TPATTPGGDNTIGSEGVSGQMQGLPLKAKPEEEEEKETFVAFARVYSGVVRRGQKVFVMG
PKYDPAQGLRMLPEGSTSVSACLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIG
GLEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPC
AEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVN
EDLGKQQKVAVIHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEGSAD
LIRTLEQAGQAQREGRTLDMSTWTLDALMVLKSRLEVLLQGRKWRNAVDRIWAFGPRRYG
PNILLNSVEGYQRPSVWHCLEREKGEKEGGAKAEASAIRDFDNSVVSGFQLATLSGPMCE
EPLMGVCFSVERWDMNFPTQRTHLDSVTEKDSNSLDASVSESPGEAVGQQGASGKAGGAG
ETPSQAEGAMAGASHGRLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAMYTCEIMAT
AEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRTSGLASPQL
VFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNGVRRRKGLYVEEKIVEHGEK
QRTLSKNK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatccagccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gccagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
tctggggagaaggactacctgataaacttgattgactctccgggccatgtggacttttcg
tctgaggtgtccaccgccgtcagactatgtgatggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcatggctggagaacatcagg
cctgtgctggtgatcaacaagattgaccggctcatcatggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctctaaagtgctggaggaccgcgcggtgaaagaggagcgggcggaggaagataag
gaggagggggacatcaagcctgctgaatgtcccgggtcagagcaggtgtacgactggagc
gccgggctagaggattcggacgactcccagctctacttctctccagaccaggggaatgtg
gtcttcgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agccagaggatgggcatcagggctgaggtgctcctgaagactctctggggagacttctac
ctcaacgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagcctctg
tttgttcagctcgtcctggacaacatatggagtttatatgacgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
tcgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccgtc
tcacaggctgtgctgttcatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgttggagcacgcaggttccactcactacccctgcag
acccaggaactgaagaccgccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttatggtggacgccaaggccctgcctcagaacaaacagagg
ccgttgacccaggaggagatgggccagcgcagggagctggccagacagagacacactgag
agactggcagccattcagcagacggaaagtggggagggaaatgcccaatcaggaagtaca
acaccggcaaccactcctggtggagacaacaccataggtagtgagggtgtctcaggccag
atgcagggcctgcctctgaaggctaaaccagaggaggaggaggagaaggagacgttcgta
gccttcgccagagtctacagcggggtggtccgcagaggacagaaggtgtttgtgatgggg
cccaagtacgaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagt
gcctgtctccctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctg
atgggcagagaactggaggaactagaagaggtgccatcagggaacgtactgggtattggc
ggtctcgaggagtgtgtgttgaagtctgcgaccctctccacctcccctgccctcccccct
ttcatccccctcaacttcgaagctacgcccatcgtacgagtggccatcgaacccaaacac
ccaagtgagatgcctaagctggtacggggtatgagactgttgaaccaggctgacccgtgt
gctgaggttctgatccaggagacaggagaacacgtactggtcacggccggagaggtccac
ctgcaacgctgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctcc
aagccaatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaat
gaagacctggggaaacaacagaaggtggctgtgatccaccaggtgaaagagtcagacacc
ttgcacctggaccccagcggcctggtgaccctcaccacccccaacagacaggccaccgtg
ggggtacgggccataccactacccgaagaggtgactcttctactggagggtagtgctgac
ttgatccggaccctggagcaggcaggtcaggcccagagggaggggaggaccctggacatg
agtacctggaccctagatgccctgatggtgctgaagagcaggttggaggtcctgctgcag
gggaggaagtggaggaacgctgtggaccggatatgggcctttggaccacgcaggtatgga
ccaaacatcctccttaacagcgtagaggggtaccagagaccatccgtgtggcactgcctc
gaacgagagaaaggagagaaagagggaggggcgaaagctgaggccagcgccatccgagac
tttgacaacagcgttgtcagcggtttccagctcgccaccctctctggtccaatgtgcgag
gagcccctcatgggcgtctgcttctctgtggagagatgggacatgaacttccccacccag
cgcacccacctggactctgtgactgaaaaagactccaactcccttgatgcatctgtttcc
gaaagccccggtgaggctgtaggtcagcagggggcctcaggcaaggcagggggagcgggt
gagacaccttcccaggcagagggtgccatggctggagcgagccacgggagactagtggac
tgctacgggccgttctctggccagctcatagctgctgtgaaggaggcttgtcggcacgcg
ttccaggccaaacctcagagactcatggctgctatgtacacctgtgaaatcatggctaca
gcagaggtgttaggtcgtgtgtacggggtcctggggaagagggagggccgagtgttacag
gaggagatgaaggaggggacggagatgttcatcatcaaggccgtccttcctgtggccgag
agcttcggattcgctgatgagatacgcaagagaaccagtggattggctagtccacaactg
gtcttcagccactgggaggtgatctccagtgatccgtcctgggttcctaccacagaagag
gagtacctccactttggagagaaggctgattctgccaatcaggctctgaaatacatgaac
ggtgttcggcgtcgtaaagggctgtacgtggaggagaagatagtggagcatggcgagaaa
cagagaacactgagcaagaacaaatag
DBGET
integrated database retrieval system
