Oncorhynchus mykiss (rainbow trout): 110515651
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Entry
110515651 CDS
T07259
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110515651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110515651
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110515651
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
110515651
RAVE complex
110515651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
110515651
NCBI-ProteinID:
XP_036836972
LinkDB
All DBs
Position
6:complement(81153779..81265396)
Genome browser
AA seq
3114 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPFATNPNKRHKQLNYQWRKTGQFFLNAITYNLAWDP
QGNRILAATEHLQLWAPPSADTLIEEEDGPVTDDKPHPALNDWKCVWQCKTAMSVHITKW
SPDGEYFATAGKDDCLLKVWYPTTGWRSAVVLPDLPDKKGPQVHFSFIYLAHPRSVTGLS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETVLPEDSILGGQITENTYSSSLPGLGGKD
KIQHALESMSHLKHLRRGRRRSSALVSHTELLPSQTGTHETHTHRHISHHANALCHFHIS
ASINPATDIPAVLAESAVFTPEDGSGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKLSEQQ
LDQATDDALDQNGSPIKFDFDLDEMSEKGSSEHEEGEGGEGSTKASSPGSSSSVPLPSML
LERKMEALTLEWNKSPDMLFTIHPTDGSFLVWHVKYLDEYIQGIFRQVQVSFSSRIPVAF
PTGDANSLSKNILMYACSFSNVDSSNAGGEQGRRARRLPRSASAGLGSSALSLSLGQAPG
IGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHTFRYCGHRFHLNDQACHTVLPLL
LTSSHHNALLTPPSAPGSIDLDQPPTHTPPPRGRRRKQLRNAATRTFHDPNAIYSELILW
RVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVASDGK
NLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSTTQ
LLHVFQEDFILGYTPQEDPELYTTSYPSLEEYHPTPFSEKFFLVVIEKDLNMNSVLQMWH
LHLQSVQACVDDPVPERSYQSQLTIPFQQSTADTSPSPLPRSASTANLQSASKLILSSKL
VCSHRLDLPVGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCSVEGGET
ALGCEEGENRIYHWEPWALLNEEEDNNSAVCVPGRPVAVSCSYTGRLAVSFKQPRPGHIP
GQGHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDDFTRPSSTLDPGVSVDSNLFVYSR
SDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTSSKDGV
AIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVY
AQWRQDRKPGEAEGDSLSSEDNIAGGGGGGGGQTATNATTGGSSLAFKGRPRSKSVFEGN
VAIDEALQAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCI
AGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIVAGRDGGRDYTEINSIPPLPLYAL
LSADLDTSYKGGEEGAKGGKVSEVEGARKTGGDQYTDLFQLQAVTTDDFVSFATEKVEKK
SRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRLEQMFLVALADTVATTSSEVSSST
DKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEE
MLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMVEKVGKAAFQRNNDPLDAALFYLA
MKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAG
SLKDAIEVCLEKMEDIQLAMVVARLYEADYESSSTCQAILYEKVLGCQRDGSGYHCTKLH
PDPFLRSIAFWIMKDYTKALDTLLECIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLII
RRHYASPEGAVTSSLGLTSEKSSVDEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPK
VTKKTVSSSPLSKGSSMANVSSSLPLENGNQGALDWASPAPVKANPAWGTEESSATLDWS
QPLVKVEDDGLQLDWGDDKNDEDDTDGGLTMKKTDVETKADEGSGGVRPPGLQREDSQNH
LCSQGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYSWLEKEIGAMHR
ICNYKVTGKEESQELERWEDGGGVEDVFEESLGGGGGTEAGAYERHQLGRRRLAAKQLHA
ERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQESQQETTVKQLQSPLPL
PTTLPLLSASIATTKTVISNPVLHLSNHIHDILHTITQMELPPHPDLMDDRVNLLHTLAA
SLSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERRRLRTESIEEHATPTSAPAQWP
GVSSLIALVQSAQGEDQPKLNVLLCEAVVAVYLSLLIHGLGMHAGNELFRLAAHPLSNKM
WAAVFGGGAKIIIKPKRNAEITPAAAAGKARTDSSSSVTSEPDSGTKAKPAVPAPPPAED
VDRLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYREKFIPPELSMWDYFVAKPFLPLS
DSGALYDSDESGEEDDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFL
PLTGLDFTDLPVTSPLGNAVLKTLENWETQLQERMNKFDGPPPNYINTYPTDLSTGGGPA
ILRHKAMLEPDNTPFKNKNHISFPARRLWHYLVKQEVLQETLIRYIFTKKRKQSECVEGY
MDLLSPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDIIMAFAINRANTNEIVLASTHDV
QEVDVSTLLAAQPYTWIGEDFDKESHSSDDVDYRSSHTNVAQASSTPSHFNPKDMAASAS
MPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMTGAQDGSVRMFEWNRPQQLICFR
QAGNARVTRLYFNSQGNKCGVSDGEGFLSLWQVNQTSSNPKPYVSWQCHSKTCGDFAFIT
SSSLIATAGQSNDSRNVCLWDTLISPSNAMVHAFPCHENGATVLQYAPKQQLLISGGRKG
FVCVFDIRQRQLLHTFQAHDSAVKALALDTSEDFFVTGSAEGNMKVWKLAGHGLMHSFST
EHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSIFDIL
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctaacgggagctgtgaaccccggtgactgctgctattctgtg
gggagcgtcaacgacattcctttcaccgcctatggttcaggctgtgatatagtgatcttg
gccagtgattttgagtgtgttcagatcatccctggggctcaaaatggcaacatccaggtg
ggctgtgtcgagtgctcccaccaactgggcaggattgctgcgtcctatgggaacacagtg
tgtatctttgaaccattcgctaccaacccaaacaaacgccacaagcagcttaactaccag
tggagaaagacaggacagttcttcctaaatgctatcacctataacctggcctgggaccca
caagggaaccgtattctggcagctacagagcacctgcagctgtgggcccctccgtcagca
gacacactgatagaggaggaggatggacccgtgaccgatgacaaacctcaccctgccctc
aacgactggaaatgtgtttggcagtgcaagactgcaatgtctgttcacatcaccaagtgg
tctcctgatggggaatactttgcaacagccggcaaggatgactgtctgttgaaggtgtgg
taccccaccactgggtggcgctctgctgtggtgctcccagacctcccagataagaaaggc
cctcaggtccacttctccttcatatacctggcccacccccgctctgtcaccggcctgtcc
tggaggaagaccagcaaatacatgcccaagggtagtgtgtgtaatgtgttgttgacgtcg
tgtgaggacggtgtgtgtaggttgtggtctgagacggtgctgccagaggacagtatcctg
ggtggtcagatcactgagaacacatacagctccagcctgccaggcctggggggcaaggac
aagatacagcacgccctggagtcgatgagccacctgaagcacctgcgtcgtggtcgtcgg
aggtcgtctgctctggtgtctcacactgagttgctgccgtctcagacggggacccacgag
acacacacacaccgccacatctctcaccacgctaacgctctctgtcatttccacatctct
gccagcatcaaccctgccacggacatcccagcggtgctagcggagtctgccgtgtttact
ccggaggacgggagtggaggaggagggtttgtggtccactggctcaacaacaaggacctg
tccttcaccacctccatggacctgttcatgctgcagctccgcaagctctcagaacagcag
ctggaccaagccaccgacgacgccctcgaccagaacggttcccccattaagtttgacttt
gacctagatgagatgtcagagaagggttcatcagagcatgaggagggtgagggtggtgag
ggcagcaccaaggcgtcgtccccaggctccagtagctcagtgcccctgccctccatgttg
ctggagaggaagatggaagcgttaactctggagtggaataagagtcctgacatgctgttt
accatccaccccaccgacgggtccttcctggtctggcacgtcaaatacctggacgagtac
atccaggggatcttcagacaggtgcaggtgtcgttctcgtcccgtatcccggtggcgttc
cctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgctccttctcc
aacgtggatagctccaacgccgggggagagcaggggaggagggcccgccgtctgccccgt
tctgcctctgctgggctgggttcctcagccctcagcctctctctgggccaagctccaggc
atcggccctgctgtcatgatggtgtccaaacatgtggacgggtctctcaatcagtgggcg
gtgacgttcgctgagcgctcggcgttctccaacgttctaactgtgtctcatacgttccgt
tactgcggtcaccggttccacctcaacgaccaggcgtgtcacaccgtcctccccctactg
ctgacctcctcccaccacaacgctctcctcacccccccctccgcccccggcagcatcgac
ctcgaccagccacccacacacacacctccccccagaggacggcgcaggaagcagctgcgt
aacgcggccaccaggacgttccatgacccgaacgccatctacagtgagctgattctgtgg
agggtggaccacataggacccctgtcctgcactggaggagtgtcagagctggcccgaatc
aattccctgcacacgtcagccttctccaatgtagcatggctgcctacccttgtacccagc
tctgtgctaggtacatactgtaacagttccagtgcgtgcttcgtagcgtcagatggtaag
aacttgcgtctctaccaggctgtggtggacgccaggaaactactggacgaactgtcagac
cctgagacctcaaaactagtaggagaggtatttaacatagtgagccagcagtcgacagcc
agaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatctaccacccag
ctccttcatgttttccaggaggactttattttgggatatacacctcaggaggacccagag
ctctacactacatcctacccttctctcgaggagtaccaccctactccgttctctgagaag
ttcttcctggttgtcatagagaaggacctgaacatgaactctgtgctgcagatgtggcac
ctgcacctccagtccgtacaggcttgtgtggatgatccggtcccagagcggtcttaccag
tctcagctgacgatcccgttccaacagagtacagctgacacgtccccctcccctctccct
cgctcagcctccacagccaacctgcagtcagccagcaaactgatcctcagctccaagctg
gtctgcagccaccgcctggacctgcctgttggggtggaggtgaccagagctacgccctcc
gcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggccccctacctgatcgtc
accacctgctctgactcccgcgtccgtttctggcgctgctctgtggaggggggagagaca
gccctggggtgtgaggagggggagaacaggatctatcactgggagccttgggctctactc
aacgaggaggaggataacaacagcgctgtgtgtgtcccgggacgtcctgtagccgtgtcc
tgttcctacactggacgactggctgtctccttcaaacagccccggcctggacacatcccg
ggacagggccatggtccagcaggggacttctccatgcacgtgtccatctttgagtgtgag
tctacgggggggtctgagtgggtgttggagcagactctccatctggatgacttcactagg
ccctcctctaccctggaccccggagtcagtgtagactccaacctctttgtgtacagcagg
tctgacctgtacatgagtcgcgaccaccactctcccaacatcaaacactatgtccacctg
gactggctgtccaaagaggacgggtctcatatcctcacggtgggggtgggatccaatatc
ctcatgtacggtcgcatctcgggcgttgtcaacgaacagacctcaagcaaggacggggtg
gcgatcatcaccctacctctagggggcagcatcaaacagggtatccgttcacgctggatc
ctgctgcgcactgtggacctgctctcctctgtagacggcaccccctccctgcccgtgtcc
ctgtcctgggtgagggacggcatcctggtggttggtatggactgtgagatgcacgtgtac
gcccagtggcgccaggaccgcaagcccggcgaggccgagggggacagcctctcctctgaa
gataacatcgccggggggggtggagggggcggagggcagacggccaccaatgcaaccacg
gggggatcctcgttggcgttcaaggggcgcccccggtccaagagtgtgtttgagggcaac
gtggcaatcgacgaggctctccaggcgccggcagggctgcaggaggggggtctgttcgag
gcagcccactccctgtcccccaccctgcctcagtaccatccaacacagctgctggagctc
atggacctggggaaggtccgccgtgccaaggccatcctgtcccacctggtgaaatgtatc
gctggggaggttgctgtggtgagggacgtggaggcaggtgagggtggaaccagacgccac
ctgtcccggacaatcagtgtgagcggcagtacggctaaagacaccatcgtggccggccgc
gacgggggacgagattacacagaaatcaactccataccccctctacccctctacgctctg
ctctctgctgacctggacacctcctataagggaggagaggagggggcgaagggaggcaag
gtgtccgaggtagagggggcgaggaagacaggaggagatcagtacacagacctgttccag
ttgcaggcggtgacgacggatgactttgtgagcttcgctacagagaaagtagagaagaag
tctagattcatcaacctgtctcagtacggacccacctacttcggaccagaacacgcacag
gtgttatctagtcagctgatgcattccagtcttccaggtctgaccaggttggaacagatg
tttctggtggctctagctgatactgtagctaccaccagttcagaggtcagcagctccact
gacaaacagtacacaggtggtgaggccctggatgagtgtgggttgaggtacctgttagcc
atgcgtctacacacctgtctcctcacctctctacccccactgtaccgcatgcagttgcta
caccaaggtctgtctacgtgtcactttgcgtgggcgttccactcggaggctgaggaggag
atgttgaatatgatcccggccatgcagagaggagaccctcagtggtctgagctacgggct
gtaggggtgggctggtggatacgcaacatcaacacactacgcaggatggtggagaaggtg
ggtaaggcagcattccagaggaacaacgatcctttagatgcagctctcttctacctggcc
atgaagaagaaggctgttctctggggcctgttcaggtctcagcgtgatgagaagatgacg
gtgttctttaagaataacttcagtgaggaccgctggcgtaaagcagctctgaagaacgct
ttctctctgctggggaaacagcgctttgaacaggctgctgccttcttcctgctggctggc
tccctgaaagacgccatcgaggtgtgcttggagaagatggaagatatccagttggccatg
gtagtagccaggctgtacgaggctgactatgagagcagttccacctgccaagccatcctg
tatgagaaggttttgggctgccagagggacgggtcagggtaccactgcaccaaattacac
ccggacccattcctacgcagcatagccttctggatcatgaaggactacaccaaggccctg
gacacactgctagagtgcatccccaaagaggatgatgagaacccagatgtgatggtgaag
tcgtgtaacccagtggtatttagtttctataactacctgaggacacaccccctgatcatc
cgccgccactacgcgtcccctgagggtgctgtgacatcatcactaggcctcacctcggag
aagagcagcgtcgacgagatcaacctcatcgaacgcaaactcttcttcaccacggccaac
gcacacttcaaggtgggctgtccagtgcttgccctggaggtgctctctaagatccccaag
gtgaccaagaagacagtctcctcgtcccccctaagtaaaggctcttccatggccaacgtc
agctctagcctgcccctggagaatgggaaccagggggccctggactgggcctctcctgcc
ccagttaaggccaatcctgcctggggtacagaggagagctcagccacactggactggagc
cagcctctggtcaaagtggaggacgatggactccagctggactggggtgatgataagaac
gatgaagatgatactgatgggggtctgacaatgaagaagactgatgtggagaccaaagct
gacgaggggtctgggggggtgagaccacctgggctgcagagagaggactctcagaaccat
ctctgctctcagggtgagtctgaggtggacgtgatcgcagagcagctgaagttcagagcc
tgtctgaagatactgatgacagagctcaggacgttagctacgggctatgaggtggacgga
gggaagctgcgctttcagctctacagctggttagagaaggagataggggccatgcaccgc
atctgcaactacaaggtgacggggaaggaggagagccaggagctggagagatgggaggat
ggaggaggagtagaggacgtgtttgaggagtccctggggggtggcgggggtacggaggcg
ggggcgtatgagcgccaccagctggggcgtaggcgtctcgcagccaagcagcttcatgct
gagaggaggaaggcgtggctgaggaagaaccaggctctgctccgagtcttcctgtcctac
tgcagcctgcatggagccaagggagggggggtcacctcggtacgcatggagctcatcttc
ctgctgcaagagagccaacaggagactacagtgaaacagcttcagtcccccctgcccctc
cccaccaccctccccctcctctcagccagtatcgccaccaccaagacagtgatctccaac
cctgtcctccaccttagcaaccacatccatgacatccttcacaccatcacacagatggag
ctgcctccacaccctgacctcatggatgacagggtgaatctcctgcacaccctggctgcc
tctctgtctgcctgcatctatcaagccttgtgtgacagccatagctacagcagccaggca
gaggccaatcagtttacagggatggtgtaccagggcctgctgctgagtgagaggagacgg
ttacgcaccgagagcatcgaggagcatgctacacccacctctgcccccgcgcagtggcca
ggtgtgtcctctttgattgctctggttcagtcagctcagggcgaggatcagcccaagctc
aacgtgctgctgtgtgaggctgtggtggcagtttacctgtccctgctcatccatgggctg
ggcatgcacgctggcaacgaactgttccgcctcgctgctcaccccctcagcaacaagatg
tgggcggccgtgtttggtggtggggctaaaatcatcatcaaacccaaacggaacgccgag
atcactccagcagcagcagcaggtaaagctagaacggactcgtcatcatcagtgacctct
gaacctgactcagggactaaggctaaaccagccgtgccagcccctcccccggcagaggat
gtggatcgactcagacgacggtttaatatgaggatgctggttcccggtcgtccagtaaag
gaggtccctgccaccccccctcccgtccctgcagagagacccgcctacagggagaagttc
attcctccagagctcagcatgtgggactactttgtggccaaaccctttctgcccctgtca
gacagtggagctctgtatgactcagatgagagcggagaggaggatgacgacgacgatgat
gatgatgccttcctctctgacacacagatgactgaacactctgaccccaactcatacagt
tggtctctgatccgtctggtcatggtgaaactggctctacataacgtcaagaccttcctc
cctctcactggactggacttcacagacctgccggtgacgtctcctctggggaatgctgtg
ctgaagacactagagaactgggagacccaacttcaggagaggatgaacaagtttgatggt
cctcctcccaactacatcaacacctaccccactgacctcagcacaggaggggggcccgcc
atactgagacacaaggccatgctggagcctgacaacacacctttcaagaataagaaccac
atttcgttccctgcgaggcgtctctggcactacctggtgaaacaggaagttcttcaggag
actctgattcgctatatcttcactaagaagaggaagcagagcgagtgtgttgaaggctat
atggatctcctcagcccaaactgtgtatctggagctctcaggtccaacaaggtggaggga
gacttaggctacccaggaaggaatgctaagatcatccacaaggagtctgacatcatcatg
gccttcgccatcaacagggctaacaccaatgagatagtgctggcgtccactcacgacgtg
caggaggttgatgtgtctactctgttagctgctcagccctacacctggataggagaggac
tttgacaaggagtcacacagttctgatgacgtggactaccgttcttcccacactaacgtt
gcccaggcctcctctaccccgtcccacttcaaccccaaagacatggcagcctctgcatcc
atgccctggctggggagtgggcagaccagcatgggtgctagtgtgattatgaagaggaac
ctgaacaatgtgaagagaatgacctcccaccccatattccagtactatatgactggggct
caggacggcagtgtccgtatgtttgagtggaacaggccacagcaactcatctgcttcagg
caggcaggcaatgccagagtcacacgcctctacttcaactcacagggaaacaagtgtggt
gtatcagatggagaaggcttcctcagtctgtggcaggtcaaccagacctcctctaacccc
aagccctacgtgagttggcagtgccactctaagacctgtggtgattttgccttcatcact
tcctccagtctcatcgcaacggcaggacagtccaacgacagcagaaatgtctgcctgtgg
gacactcttatttcacctagtaacgccatggtacatgccttcccgtgccatgagaacggt
gcgacggtgttgcagtacgctcccaagcagcagctgctgatctcaggaggcaggaagggc
tttgtgtgtgtgtttgacatccgacagagacagctgctacacaccttccaggcccacgat
tcagccgtcaaagccctggcgctcgacacctccgaagacttcttcgtaaccggctcggct
gaggggaacatgaaggtgtggaagctggcaggccatggcctcatgcactcgtttagcaca
gagcatgccaagcagtccatcttccggaacatcggagcaggcgtcatgcaggtggagacc
cgccccggcaaccgtatattcacctgcggcgccgacggaaccctcaagatgagggttcta
cccgaccgctacaacatcccctctagcatcttcgacattctgtag
DBGET
integrated database retrieval system
