Oncorhynchus mykiss (rainbow trout): 110515656
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Entry
110515656 CDS
T07259
Name
(RefSeq) retinoic acid receptor beta isoform X2
KO
K08528
retinoic acid receptor beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110515656
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110515656
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110515656
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
110515656
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
110515656
NCBI-ProteinID:
XP_021450151
Ensembl:
ENSOMYG00000007343
UniProt:
A0A8C7NZ19
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Position
3:25782275..25800223
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AA seq
452 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQEPSQTACFTGLTETDWQVHRVAQSVETQSSSSE
DLFASPLSPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDSN
CIINKITRNRCQYCRLQRCFAAGMSRECVAHKGNHTRAVRNDRSKRKEKKETPKMTIIET
YELTAELGCIVEKICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCII
RVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQI
HNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLE
ALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEM
ENLEKQKHSEEEQRADKNITPTHTHSPCPHST
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggggaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctcaaaccgcatgcttcactggactaacagaa
acggattggcaagttcatcgggtcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctctgccccctcctcgcacctacaaaccctgcttc
gtgtgccaagacaagtcctcaggctaccactatggcgtcagtgcttgtgagggctgcaag
ggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacagtaac
tgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgcttc
gccgcgggcatgtccagggagtgtgttgcccacaagggaaatcacaccagagctgtcagg
aatgaccggagtaagaggaaggagaagaaggagactcccaagatgaccatcatcgagaca
tatgagctgacagcagaactgggctgtatagtggagaaaatctgtagggctcatagagag
accttcccttccctctgccagttgggcaaatacactacaaactcaagctcagacactagg
atccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatcatc
agggttgtggagtttgccaaacgggttcctggcttcaccggcctgactataactgaccag
atcaccctcctcaaagcagcctgtctggacattctgattctgcggatctgtacaaggtac
actcctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacagatc
cacaacgctggctttggcccgctcacagaccaggtgttcaccttcgccggccagctgctg
cccttggagatggatgacacagaaagtggcctcctcagtgccatctgcctggtgtctgga
gaccgccaggacctggaggagccatctaaggtggaggtcctgcaagagcccttactggag
gccttgaagatctactcccgtaaacggcggcccagcatgcccctcatgttccccaaggtc
ctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtgacg
ttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggaggagatg
gagaacctggagaagcagaagcattctgaggaggagcagagagcagacaagaacatcacg
cccacacacacacactctccatgtccacacagtacatag
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