Oncorhynchus mykiss (rainbow trout): 110515805
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Entry
110515805 CDS
T07259
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110515805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110515805
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110515805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Motif
Other DBs
NCBI-GeneID:
110515805
NCBI-ProteinID:
XP_036807342
Ensembl:
ENSOMYG00000025209
LinkDB
All DBs
Position
18:554930..570129
Genome browser
AA seq
289 aa
AA seq
DB search
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIGKNQGKAEVEFTLNE
DLTMIDSLGDKPSGVQAPRDHPFTMQTVGGQTLAVFTETQSESSKGQSEERSDGSTSVSG
AGSGPERRHRFSFLTERISLEGLVVQRAECRPAVSENYMKLKRLQIEELSKPVRLSQQLE
KAVTTNYKPVANHSYNLEYDRKKKEEGKRARVDKQQVLDMLFSAFEKHQYYNIKDLVDIT
KQPVSYLKEILRDIGIYNVKGTHKNTWELKPEYRHYQGGEEEEEKETND
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaggcgaagtggatttaactggtgctaaacagaacacgggcgtgtggctg
gtaaaggtgcccaaatacctgtcccagcaatgggccaaagcatcaggcaggggagaggtg
gggaaactccggatcgggaagaaccaagggaaggcagaggtggaattcactctgaacgaa
gacctgaccatgattgacagcctcggagacaagccgtcgggggtgcaggctcccagggac
cacccgttcaccatgcagactgtaggaggacagaccctggccgtgttcactgagacccag
tcagagtcatctaagggccagtcagaagagagatctgatggcagcacctcagtttcgggg
gcggggtcaggcccagagagacgtcaccggttctcctttctaacagagagaatctccctg
gagggcctggtggtgcagagagcagagtgtagacctgctgtcagcgagaactacatgaaa
ctcaagagactgcagatagaagagttatccaagccagtgagattgtctcagcaactagag
aaggctgttaccaccaactacaaaccagtggccaaccattcctacaacctggagtacgac
aggaagaagaaggaggaaggtaaaagagccagggtcgacaaacaacaggtgttggacatg
ttgttctcagcttttgagaagcatcaatattacaacatcaaggacctggtcgacatcacc
aaacaacctgtgagttacctgaaagagattctgcgcgacatcggcatctacaacgtgaag
ggaacccacaagaacacgtgggagctgaagccagagtacagacactaccagggaggagag
gaggaggaggagaaggagaccaacgactag
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