KEGG   Oncorhynchus mykiss (rainbow trout): 110515871
Entry
110515871         CDS       T07259                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110515871
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110515871
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 110515871
NCBI-ProteinID: XP_036840423
LinkDB
Position
8:complement(67258..196005)
AA seq 1880 aa
MDSDSKLVAQLNSELYFLIARFLQSGPCQNAAETLIREVEEKELLPTRRDWTGKEHPGRY
EDLVKLYGHISPDHLLQVCQRVCPLLEEVVPASVPGIHSLLGAGRQSLLRTNKSCKHVVW
KGLALAALHCGRPPEPPVIYGSPPSIVETGHGRRLIGSYRLGQLLPTAVYSHMKMHKRIL
GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWGTDEGRLLATLRGHAAEISDMAVSYENTML
AAGSCDKTIRVWCLQTCVPLAVLEGHSASITSLQFSPLVSGSKRFLSSTGADGTICFWQW
DARTLKFGQGPGKFTERSRPGVQMICSSFSAGGMFLATGSTDHIIRVFYFGSGQPQKISE
LESHTDKVDSIQFSNCSDRFVSGSRDGTARIWQLHQQEWRSILLDMQAKLPGKYNPPPLE
DKVTKLKVTMVAWDRHDNTVITAANNLTLKVWNSTTGNLIHILMGHEDEVFVLEPHPFDP
RILFSAGHDGNAIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFAATDSHGHLL
IFGFGSSSKYDKIADQMFFHTDYRPLIRDVNNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
PPYQRLVPGRESCRDQQLIPQMGVTSSGLNQVVSEQAVEGASPLDNMIHRLQQEQDQRLS
TDTHNREVHSPPNVGLRRSGQIEGVRQMHSNAPRSQMATETDLVAWSRRVLVPELGDAEL
RKQLNWREAKGEEEISVYRSEGRRHTVHLHRESKVSSPDCVGVEEGRRSHGNHGYQTRAA
VEETSRHSAEIADDDDNNSISEGEVDVHPNPVNGNSSEEEKEEEEKEPWPEDHSSSSDYS
SDYSDWTADAGINLEPPKKSVKVKKKSSSSEEDGEKKREVKRDRKKDKADKDGALPKKKK
PKERRKRVEFQEEGLTLEEWLPSAWITDTVPRRCPYIPQMGDEVYYFRQGHEAYVEMTKQ
NQIYSINPKKQPWHKMELREQELVKIVGLKYEVGLPSLCCLKLAFLDPDTGKLTGGSFSM
KYHDMPDVIDFLVLRQQFDDARDHNWTIGDRFRSVIDDAWWFGTIEDQEPFQPEYPDSLF
QCYNVCWDNGDTEKMSPWDMEPIPNEVVFPEELGQSVPLTEEEQRELLYVPLEGEWGAAT
RNHECQRIVNAIDQLTTLDVAVPFALPVDLQAYPSYCTVVAYLTDLSTIRSRLENRFYRR
MSSLMWEVRYIEHNAQTFNETGAFIVKTAKFVSDLMLSFIKDPTMTDIIPLYNTMKKTAF
SDTEDEDDEDEDEDTDTPGTSTRNRKGRGVGLQQLQRGGGVRRGRPLDPQAWRGRSKELI
DLLFQCEDSEPFRQPVDLEQYPDYLDIVDTPMDFGTVRGMLRSGEYTSPLELYQDVRLIF
SNSKAYTPSKKSRIYSMSLRLSALFEEHVNSILADYKASHGQTDRKTRHRADRQTRHVAD
RQTDRQTRHVADRQTDRQTRHVVDRQTDRQTRHVADRQTERQTRHMGDRQTDRQTRQVVD
RQTDRQTRHMVDRQTARQTRHMVDRQTDRQTRHVAARQTDRQTRQAMKRRRSDSPSSSAA
SSPERKKRVSSRGVSRLDSLSPPTAPAAAPQRPPSLRQTLPIRQPLPLLNGKAEQQNPGR
TRSARTQTPSTADMHSTAASPRSPSPQATAHLNGHSSQETVGVSAGRRGRRPRAVTPEPS
PSPAPKGRPPGRKRGRKSKQELEAMRRGLRRSSTPEDKLNQSTGDEGGTSSAQEASVLSG
AGLPGTPRRRGRPRLVRTEIAPPPSSPEPSPSPLRRSSRRINDEMTPPARSLQQSQRVRA
SPQDENDDEEEEAEQEGEGSAGSMRTRNRGRRTAYYTEEDSEEEEQRQLLVEDSSLTFGT
SSKGRVRKLTDKAKANLIGW
NT seq 5643 nt   +upstreamnt  +downstreamnt
atggattcagacagtaaactggtcgcccagctgaattctgaactctacttcctaatcgcc
cgctttctacagtctggaccgtgccagaacgcagcagagacgttgatccgggaggtggag
gagaaggagctactgcccacacgacgggactggacggggaaggagcacccagggagatac
gaagatttggtgaagctgtatggccacatcagtccggaccacctgctgcaggtgtgccag
agggtgtgtcctcttctggaggaggtggttcctgccagcgtccccgggatccacagtctg
ctgggggcggggcgacagagcctgctacgcaccaataagagctgtaagcatgtggtgtgg
aagggtttggccctggcagcactgcactgtggtaggccccctgagccgccagtcatctat
gggagcccgcccagcatcgtggagacaggtcacggccgtcgtctgattggttcgtaccga
ctgggtcagctcctccccactgcggtctactcacacatgaagatgcacaagaggattctg
ggacatctgtcctctgtctactgtgtcaccttcgaccgcactggacggcgcatcttcacc
ggttcagatgactgcctggtgaagatttgggggacggacgagggccgtctactggcaacg
ctgagaggacacgctgctgagatctccgacatggccgtgagctatgagaacaccatgcta
gctgcaggtagctgtgataagaccatcagagtatggtgtcttcagacctgtgttcctcta
gcagtactggaaggacactctgcatccatcacctctctacagttctctcctctggtcagc
ggttctaagcggttcctgtcctccaccggagccgacgggaccatctgcttctggcagtgg
gacgcacgcacactcaagttcggtcaggggcctggtaagttcacggagcggtccagacct
ggagttcagatgatctgctcttccttcagcgcagggggtatgttcctagctacaggcagt
acagaccacatcatcagagtgttctacttcggttctggacaaccacagaagatctctgag
ctggagtcacacactgataaagtggacagcatccagttttcaaactgcagtgacaggttt
gtgagtggcagcagggatggtacagctcgtatctggcagctccatcagcaggagtggagg
agcattctactggacatgcaggccaagttaccagggaagtacaatccccctccgctggag
gacaaggtgaccaagctgaaggttaccatggtagcctgggatcgtcacgacaacacagtc
atcaccgccgccaacaacctgacgctcaaagtctggaactccaccaccggaaacctcatc
cacatactgatgggtcatgaggacgaggtgtttgtcctggagccacacccctttgacccc
cgcatcctgttcagcgccgggcatgatgggaacgccatcgtctgggacctggcccggggg
gtcaagatacgatcctacttcaacatgattgaaggtcaaggccatggggcggtatttgac
tgtaagtgtagtcctgatggacagcactttgctgctacagactcacatggtcacctgctc
atcttcggcttcggttccagcagcaagtatgacaagatagcagatcagatgtttttccat
actgactaccgcccgttgatccgggatgttaataactacgtgttggacgagcagacccag
caggcaccacacctcatgccccctcccttcctggtggacgtggacgggaacccccaccct
cctccataccaacgtctcgtacccggacgggagagctgcagagaccaacagctcatacca
cagatgggagtcacctcctcaggcctgaaccaggtggtcagtgaacaggctgttgaagga
gcctctcctctagacaacatgattcacagacttcaacaggagcaggaccagagactgtct
acagacacacacaacagagaggttcactccccccccaacgtgggtctgcgtcgcagtggt
cagatcgagggggtgagacagatgcacagcaatgctccccggagccagatggccacagag
acagacctggtagcatggagcaggagggtactggtccctgagctgggggacgctgagctc
aggaaacagctaaactggagggaggctaaaggagaggaggagatcagtgtctacagatca
gaggggaggagacacactgtccaccttcacagagaaagcaaggtatcctctccagactgt
gtaggggtggaggaggggaggagaagtcatggtaaccatggctaccagacgcgtgcggct
gtggaggagacgagtcgtcacagcgctgagattgctgatgatgacgacaacaacagcatc
tcagagggagaggtagatgtgcatcctaaccctgtgaatgggaactcttcagaggaggag
aaggaggaagaggagaaggagccctggcctgaagaccacagcagctccagtgactactcc
agtgactactctgactggacagcagatgcagggatcaacctggaaccaccgaagaagagc
gtgaaggtgaaaaagaagagcagcagctctgaggaggatggagagaagaagagagaggta
aaaagagacaggaagaaagacaaagcagacaaagatggagcgctaccaaagaagaagaag
ccaaaggagaggaggaagagggtagagttccaggaagagggactaactctagaggagtgg
cttccgtcagcctggatcacagacacagtccctcggagatgtccctatataccacagatg
ggagatgaggtttactacttccgtcagggtcatgaggcgtatgtagagatgaccaaacag
aaccagatctacagcatcaaccctaagaaacaaccctggcacaagatggagctacgggag
caggagctggtgaagatagtagggctaaagtatgaggttggtctcccctctctctgctgc
ctcaaactggccttcctggaccctgatactggcaagctgactggaggctccttctccatg
aaataccacgacatgcctgacgtgattgacttcctggttctgcggcagcagtttgatgat
gcgagagaccacaactggaccataggtgacaggttcaggtcggtgatagacgatgcctgg
tggttcgggaccattgaggaccaggagcccttccaaccagagtacccagacagcctgttc
caatgctacaacgtctgctgggataatggtgacacggagaagatgagtccttgggacatg
gagcctatccccaacgaggtagtgtttccagaggagctgggtcagagcgttcctctaacg
gaggaggagcagagagagctgctgtatgttcccctggagggtgagtggggcgccgccacg
cggaaccacgagtgtcaacgcatcgtcaacgccatcgaccagcttaccacactcgatgta
gctgtaccgtttgccttgccagtggatctccaggcttatccttcctactgtactgtagta
gcctacctcacggacctcagcaccatacggtccaggctggagaaccgcttctacaggcgt
atgtcatcgttgatgtgggaggtgcgttatattgaacacaacgctcaaacctttaatgaa
actggagccttcatcgttaaaacggccaagttcgtctctgacctcatgctcagcttcatc
aaggaccccactatgactgacattattcctctctacaacaccatgaagaagactgctttc
tctgacaccgaggatgaggatgatgaagatgaggatgaagatacagacactcctggaacg
tccacacgaaacaggaagggtcgtggcgttggtctgcagcagctgcagcgtggcggtggt
gtaaggcgaggccggcccttagacccccaggcctggagggggcgcagcaaggagctgata
gacctgctcttccagtgtgaagactcagaaccgttcagacaacctgtcgacctggaacag
taccccgactatctggacatcgtggacacccccatggactttgggacggtgagggggatg
ctaagatcgggggagtacacctctcccctggaactctaccaggacgtacggctcatcttc
agcaactctaaagcttacacacccagcaagaagtcccggatctacagtatgagtctccgt
ctgtctgcgttgtttgaggaacatgtcaactccatcctggctgactacaaagccagccat
ggacagacggacagaaagacgagacatagagcagacagacagaccagacacgtggcggac
agacaaaccgacagacagaccagacacgtggcggacagacaaaccgacagacagaccaga
cacgtggtggacagacaaaccgacagacagaccagacacgtggcggacagacaaaccgaa
agacagaccagacacatgggggacagacaaaccgacagacagaccagacaagtggtggac
agacaaaccgacagacagaccagacacatggtggacagacaaactgccagacaaaccaga
cacatggtggacagacaaaccgacagacagacaagacacgtggcggccagacaaaccgac
agacagacaagacaagctatgaagaggaggaggagtgactctccctccagcagcgctgcc
tcaagcccagagaggaagaagcgtgtgtcatcgaggggtgtatccagactagattccttg
tccccacccacggctccagctgcagccccacagcgccccccctccttgagacagactctc
cccattcgacagcccctccccctcctcaatgggaaggcagaacaacagaaccccggacga
acgcgcagcgccaggacacaaacaccctccacagcagacatgcacagcactgcagcctcc
cctcgtagcccctcgccccaggctactgcccacctgaatggccacagtagtcaggagaca
gtcggcgtgtctgcaggtcggaggggacggagacccagagcagtgacccctgaacccagt
cctagccctgcccccaagggtcgcccgcccggcaggaagagaggcaggaagtccaaacag
gaactagaggccatgaggaggggcctccggcgaagctccaccccagaggacaagctcaac
caatccacaggcgacgagggcgggacttcctctgcccaggaagcgtctgtgctgtcgggg
gccggacttccaggaacgccacggcgccgcggtaggccaagactggtcaggacagagata
gcccctcccccttccagccctgagccctccccttcccctttgaggaggagcagccggcga
atcaacgacgagatgactccccctgcccggtctctgcaacaatcacagcgcgtgagggca
tcgccacaggacgaaaacgacgatgaagaggaggaggcggaacaggaaggggaggggtca
gcgggatcgatgcgtacgcgtaaccgggggcgacggacggcatactacacggaggaggac
tcagaggaggaggagcagagacaactcctggttgaagactcctccctcaccttcggcact
tcctccaaggggcgtgtccgcaagctcacagacaaggccaaggccaacctcatcggctgg
taa

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