Oncorhynchus mykiss (rainbow trout): 110516257
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Entry
110516257 CDS
T07259
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omy04030
]
110516257
G protein-coupled receptors [BR:
omy04030
]
Rhodopsin family
Vision
Opsin
110516257
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Motif
Pfam:
7tm_1
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
110516257
NCBI-ProteinID:
XP_036812510
Ensembl:
ENSOMYG00000036127
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All DBs
Position
21:3385456..3391594
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AA seq
353 aa
AA seq
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MAELGVFAARRQEDTTRESGFAYTNSNHTKDPFEGPNYHIAPRWVYNISTLWMLFVVVAS
TFTNGLVLVATAKFKKLQHPLNWILVNLAFADIAETLLASTISVCNQMFGYFILGHPMCV
FEGFTVATCGIAGLWSLAVISWERWVVVCKPFGNVKFDAKWAMGGIIFSWVWSAFWCAPP
IFGWSRYWPHGLKTSCGPDVFGGNEDPGVLSYMIVLMITCCFLPLGVIVFCYLFVWLAIR
AVAAQQKDSESTQKAEKEVSRMVVVMIFAYCVCWGPYTAFACFAAANPGYAFHPLAAALP
AYFAKSATIWNPVIYVFMNKQFRTCIMQLFGKEEDDGSEVSTSKTEVSTVAPS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctaggagtgtttgctgcaaggagacaagaagatacaaccagagaatcaggc
tttgcctacaccaacagcaatcataccaaagatccttttgagggccccaactaccacatt
gctccaagatgggtgtacaacatctcaacactctggatgctctttgtggtcgtcgcctca
accttcaccaacggcctggtactggtggccactgccaaattcaagaagctccaacatcct
ctcaactggatcctggtcaacctggcgtttgccgacattgcggagactcttttggcgagc
accatcagcgtttgcaaccagatgtttggctactttattcttggacacccaatgtgtgtc
tttgagggattcaccgtcgccacatgtggtattgctggtctgtggtctctggctgttatc
tcctgggagagatgggtggtggtgtgtaagccctttggaaatgtcaagtttgatgctaaa
tgggccatgggaggtataatcttctcctgggtctggtctgctttctggtgtgcccctcct
atcttcggctggagcaggtactggcctcatggactgaaaacgtcctgtggacctgatgtg
ttcggaggtaatgaggatcctggagtcctgtcgtacatgatcgttctcatgattacatgt
tgcttcctgcccctgggagtgatcgtcttctgctacctgtttgtgtggctggccatccgt
gccgtagccgcgcagcagaaagactcggagtcgacgcagaaggctgagaaggaagtatcc
aggatggttgttgtcatgatttttgcttactgtgtatgctggggaccttacacagccttt
gcctgctttgctgcggctaaccctgggtatgctttccaccctctggctgctgctctgcct
gcctactttgccaaaagcgccaccatctggaatccagtgatctatgtcttcatgaataaa
cagttccgtacgtgcatcatgcagctctttggcaaggaagaagacgatggctcggaggtg
tctacatcaaaaacagaagtttccaccgtggcaccttcataa
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