Oncorhynchus mykiss (rainbow trout): 110516345
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Entry
110516345 CDS
T07259
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110516345
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110516345
03041 Spliceosome [BR:
omy03041
]
110516345
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110516345
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110516345
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110516345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
110516345
NCBI-ProteinID:
XP_036837946
Ensembl:
ENSOMYG00000036816
LinkDB
All DBs
Position
7:complement(1973992..2005500)
Genome browser
AA seq
1035 aa
AA seq
DB search
MIIENLDSLKTWLFKTLEPICDADPSALAKYVVALVKKDKSETELKALCVDQLDVFLQKE
TQTFVDRLFEAVNSKSYLPQQDHQPGSAGKAEGHLTRTDKDDQRKDEPSREEDRDKKFSR
RVNYSPPSSSRYSRDSRRGDDRKRDDRTRKRNDYDRIPPRRDSYRDRYNRRRGRSYSRSR
SRSKDRARDRERDRDRGSRSHSRSHSKSRERDAGRSKYEPDRGDRGTEVGAGEGLLPIPT
ATATFPVPTLSSTITVIAPQGNHSNSIASVTDSWSDFHPDQSLDRPLPPQRKRCRDYDEK
GFCMRGDICPFDHGIDPVVVEDVNLPNMFQAPPPIPGVAQPPPGLPPPPGPPPLMTPPPV
NLRPPVPLTGSLPPGLPPSLPPGPPHQASGMDAPPSSIANSVPTIVTTGTRPSIPQPPAP
LFPPGQYDPDMYNPEDPSLTNTSRPVYRHRVNAQRPNLIGLTMGEDLPHRDRDQMPNRMR
IVLDSASRKRSAVSHHGAMLPKKPWSDKPNFNQQNLQGGFHNKNPQNQNQKAPFGSNTKL
SVLQIPQGLNNISKLNQHFSKFGTIVNLQVTYGNDPEGALIQFDSHEEAKRALQSPEAVL
NNRFIRVLWHCEDEMGQQGMGQQGMGQQGQQGMGQQGQQHHQPQPLMQVQQPATSLKQSV
KDRLGPLPADCSEPNQDSRVASQNDFKSNLSMKERLGFASKPGSTPSGPAGKVFSTSTGL
TKTVYNMAALKAAQKTALFAGVTATEEAMKNKQEALRLQQEMRKKKQEILEKHIETQKLL
ICKLEKNKTMKAGDKAVIMTTLGTLTKSITKLQQEIKGLSNPSGVRGAPKSKAQAQKELL
DTELDLYKKTQSGEDTVQLKIRYTQLQLEAAKRGILAPGRGRGAHARGRGGLRGRGRGRG
CRGRGLPVHSTVDHRPRALEISGFTETDLQDLLPHFAQFGELEDCQIDETSCLAVITYRS
RPEAEQAALHSVRLNGSDLRLSWHKPAVSLTSQEPDEQETDHDEVKFQEESLIDDALLQD
DDEEDDDNEPRPWRR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgattattgaaaacctagattcattgaaaacgtggctttttaaaaccctcgaaccaatt
tgtgatgcggatccatctgccctcgctaaatacgtcgttgccttggtgaagaaagacaaa
agtgagacggaactcaaagctctttgtgtcgaccagttggacgtatttctacagaaagag
acgcagacctttgtcgatagactctttgaagccgtcaactccaaaagctacctacctcag
caggaccatcagccaggttccgcgggcaaagcggagggtcacctgaccaggacggacaaa
gacgaccagaggaaagacgagccgagtcgcgaggaggaccgggacaagaagttctccagg
agagtgaactacagccccccgtccagctcccgctacagtagagacagcagacgaggggat
gaccgtaaaagggacgaccgtaccaggaaacggaacgattacgaccgcatccccccgaga
cgggactcgtaccgggaccgttacaaccggaggaggggccgtagctacagccgcagtagg
agcaggagcaaggaccgggccagggaccgggagagagacagagaccgcggtagcaggagt
cacagcaggagccactccaagagcagagagcgggatgctgggaggtcaaagtacgagccc
gatcgaggagaccgggggacggaggttggagctggagaaggcctcctgccgatccccacg
gcaaccgccacgttccccgtgccgaccctcagcagcaccatcacggtgatcgcccctcaa
ggtaaccacagcaacagcatcgcctcggtgacggacagctggtcggacttccacccggat
cagtcactggaccggccccttccgccacagaggaaacgttgccgtgactacgacgagaaa
ggcttctgtatgcgcggggacatttgcccgttcgaccacggtatcgatccagtggtggtg
gaggacgttaatctacctaacatgttccaagcccctccccctatcccgggggtcgcccag
ccccctcccggcctaccgcccccgccaggacctccccctctcatgacgccacctcccgtc
aacctccgtccccctgtgcccctgacaggcagcctgccgcccggcctgccgcccagcctg
ccgccaggtccccctcaccaggcatcagggatggatgcccctcctagctccatcgccaac
tctgttcccactattgtaaccacagggacacgaccctccatcccccagcccccggctcct
ctcttcccaccaggccagtatgaccctgacatgtataaccctgaggatcccagcctcacc
aacacctccagaccagtgtatcgccacagagtcaacgcccagagacccaacctcatagga
ctgactatgggggaggacctgcctcacagagacagagatcagatgcccaacagaatgagg
attgttctggactcggcctccaggaagagatctgctgtctcacaccacggagcaatgctc
cccaagaaaccctggtccgacaaacctaacttcaaccagcagaacctccagggtgggttc
cacaacaagaaccctcagaaccagaaccagaaggctccgtttgggtcaaacaccaagctg
tcggtccttcagatcccccagggactcaacaacatctccaagcttaaccaacacttcagc
aagttcgggactatcgtcaacctgcaggtaacctatggtaatgacccggagggggccctg
atccagttcgacagtcacgaggaggctaagcgtgccctgcagagtcctgaggctgttctc
aacaaccgcttcattagagtcctctggcactgtgaggacgagatgggacagcagggaatg
ggacagcagggaatgggacagcagggacagcagggaatgggacagcagggacagcaacac
catcaaccacagccactcatgcaggtgcagcagccagccactagtctgaaacagtccgtc
aaagaccgtctgggccctctgcctgccgactgctcagagcccaaccaagactctcgtgtt
gcctcacagaatgactttaaatccaacctatcaatgaaggagaggctgggcttcgcctct
aaaccaggaagtacccctagtggaccggcaggaaaggtgttctccacctctacggggctg
actaagacagtgtacaacatggctgctctgaaagcagctcagaagacggctctgttcgct
ggggtcactgctacagaggaggctatgaagaataaacaggaagccctgcggctccaacag
gaaatgaggaagaagaagcaggaaatcctggagaaacacatcgagactcagaagctgttg
atctgtaaactggagaagaacaagacgatgaaggcaggagacaaggcggtgatcatgaca
acgctgggaacgctgaccaagagtattaccaaactacagcaagagattaaaggactctcg
aacccttcgggagtacggggggcgcccaagagcaaggctcaggctcagaaggagttgctg
gacacagaactggacctgtataagaagacccagtctggagaagatactgttcagctgaag
atcagatacacacaactacagttagaggcagctaagagggggatcctggctccagggcgg
ggcagaggggcccatgctcgaggccgtgggggcctgagaggcagggggaggggaaggggt
tgccgggggaggggtctccctgtccactctacagtagaccacagacccagagccctggag
atctctggctttactgagacggacctccaggacctactgccacactttgctcaatttgga
gagttggaggactgtcagatagacgagacatcctgtctggctgttatcacctacaggagc
agaccagaggctgaacaggctgcgctacacagtgtccgtctgaacggcagtgacctgcgt
ctgtcctggcataagcctgccgtctccctgacctcccaggagcctgatgagcaggagacg
gatcatgacgaggtgaagttccaggaagagtcgctgattgatgatgcgttgctccaggac
gacgacgaggaggatgacgacaacgaaccccgcccctggcgcagatga
DBGET
integrated database retrieval system
