Oncorhynchus mykiss (rainbow trout): 110516439
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Entry
110516439 CDS
T07259
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110516439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110516439
03036 Chromosome and associated proteins [BR:
omy03036
]
110516439
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110516439
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110516439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
110516439
NCBI-ProteinID:
XP_036797511
LinkDB
All DBs
Position
13:complement(57174996..57189319)
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AA seq
651 aa
AA seq
DB search
MEEVDVEPTTTPIPGFDSNQKHLGFVWGPGDILVYETIYKASGGSAGGCPFVHEVRKDED
IYSPILRKLFNESHHIFVGLQRIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TQDAAMATQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLVLHLLDWVRLHKADVDEKAR
EVLASESPAEHQAYWDVVISYVLQGRMDEARQVLVKQAALQPAARVMFKLLDNLLMKMPI
FNPGETQTLTEFDVKWRHWREEVDHCLQDQSFASNRHLEDICKILVGDEDVLLEYKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSSMHMFLDTRSVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVGHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKALKVIRICEQRQMTEQVRSICKIMAKKALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSDAAKLLLSLMTAKIAPHSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSGKSVPTPDKPMQDEDIETTKIELLRLALARNLAMAIVKEGTVEI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagatgtggagccaacaactactcctatccctgggttcgacagcaaccaa
aaacacttgggatttgtgtggggtcctggagatatcctggtttatgagaccatttacaaa
gcatcaggtggatctgcagggggttgtccctttgtccatgaggtcaggaaagatgaggac
atctattcccctattttgcgtaaactcttcaatgagtcccatcacatctttgttggtctg
cagaggatcagagaggatctgcccagcaagaacaagaaaccccagttcgtcagtattagc
aagaactacaggtctgtgattcgagcatgcatggaggaactccagcaagtcgcagtttct
acacaagatgcagcaatggctacacagtatggaaatcaggtgtcaatcctgctggcagta
gagctgatctggaacctttgtgaagtgttgttcatcgatgcagctccagctggctccctg
gtgctccacctgctcgactgggtgaggctgcacaaggctgacgtggatgagaaggccagg
gaggtgctggcgagtgagagccccgcagagcaccaggcctactgggacgtggtgatcagc
tacgtgctgcagggccggatggacgaggccaggcaggttctggtgaaacaggcagctttg
cagcctgcagccagggtcatgttcaagctgctggacaacctgctcatgaagatgcccatc
ttcaatcctggtgagactcagaccctgacagagtttgatgtaaagtggagacactggcgc
gaggaggtggaccactgtctccaggaccagtcctttgccagcaaccgccacctggaggac
atctgtaagatcctggttggtgatgaggatgttctcctggagtacaaggagctgctgagt
acctggtatcacttcctggtcaccagactgctgttctcccaccccactgtcaagcccaca
gagctgcactactacgcacagtctagcatgcacatgttcctggacacgaggagtgtccca
gaacccctggacagcatcctgctggcagcctttgagtttgacatccaccaggtcatcaag
gactgcagcattgctctcaacaactggtggtttgtggggcatctgactgacctgctggac
cactgtaaactgctccagtctcacaacctacattttggctccaacctgagagagtttcta
ctgctggagtacgcctcaggactcttcacccatcacagcctgtggcagctggctgtggac
tactttgaccactgtccagagtttggccgtgtgtacctggagctacagatagagcgtgtt
cctctggacacggagcgcaaggccctgaaggtgatcaggatctgtgagcagaggcagatg
actgaacaagtgaggagcatctgtaagatcatggccaagaaggccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagagccaaagatgctgccttcgccaccctcata
tcagagaggtttctccaggactactgtgccaaagggaccttctctgatctggacctgatt
gacaacctgggtccagccatgctgctcagtgacaggcttacttttctagggaagtaccgt
gagttccatcggctgtacggcgagaagcgtttctcggatgccgccaagctcctcctctcc
ctgatgacggccaagatcgccccacattccttctggatgactctgctgaccgacgccctg
cccctgctggagcagaaagaggtgatcttctctgctgatcaaactcatgagctgatgttc
tgtctggaggagctgacctcagggaagagtgttcccaccccagacaaacccatgcaggat
gaggacatcgagacgacaaagattgagctcctgcggctagcgctagctcgtaacctggcc
atggccatagtgaaggaggggacagtggaaatttga
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