Oncorhynchus mykiss (rainbow trout): 110516467
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Entry
110516467 CDS
T07259
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110516467
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110516467
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110516467
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
110516467
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
110516467
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Type II RPTP family
110516467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_3
I-set
Interfer-bind
Ig_2
ig
Fn3_VIN3
Y_phosphatase
V-set
FNIII-A_GpJ
Ig_C17orf99
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
110516467
NCBI-ProteinID:
XP_036830303
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTTNNNGRIKQLRSESFGGTPIR
GALQIELSEEQDQGKYECVATNSDGTRYSTPANLYVRVRRVPPRFSVPPADSEITPGGGI
NITCVAVGSPMPYVKWMLGTEDLTPEDDMPIGRNVLELGDIRQSNNYTCVAMSTLGVIEA
MAQITVKALPKTPGNPVVTERTATSITLTWDSGNPEPVSYYIIQHRPKGSEDIYKEIDSI
TTTRYSVGGLSPYSHYDFRVAAVNTIGRGPASDSVEARTAEQAPSSPPRQVRGRMLSTTT
AIIHWDGPEEANGQVVGYRVYYTDDNTLQVNQWEKLMVRGVNFITIHSLTPNKTYYIRVL
AFTSVGDGPLSQDLQIIAKTGVPSQPSDFKGEAKSETSVLLSWVAPPQSGPENLITGYEL
VYRRSGDNEEKKLNFDPASSYLIKNLKPFSSYTFQLAARSKHGIGAYTNEVTTDTPQTQP
SAPPQEVTCSSPNSTSILVSWAPPLAEFQNGIITGYSIQYSVTERDNRTSQQVSRIPPGS
SPYLLENLEKWTEYGITVRALTEAGEGPESLQLLVRTEEDVPSGPPRDVASEAVNSSAVR
VVWRAPAVERQHGQVRGYQVHYMKMNYGEPAGPNLIKDILLDDSQWEYNESAEYELVLGE
LQADTAYSVSVGAYTAKGDGARSKPQTLCTTLPLPEPPRLSVSPTPVGTAQLQWLPPPSP
ATPLLGYRLTFGRLDVLPFTVVEFPSKEKSYTAQDIHKGASYVFRLSARNKIGYGEEAAI
EVTTPEDVPGGHPENILSEGASASSIRLAWKSVPLIEQNGKIVKYSVQYRDVNGRGGNAT
GEVVVTVPESSVALEGLSADTVYDVRVRAFTAVGAGPYSPGVQFRTRPLDVEVFATNFRV
KAAMKNSVLLTWEIRDKTPSQPFTILYGKGQSVEVDGKQNQKLITGLQPETQYSFLLTNR
GNSAGGLQHRVTVTTAPDVLRSKPTLVGKTNADGMVTVQLPPVQTTTTVRGYYVVVVPLK
KQRGGKFLKPGDNPDQMNLDELLKEINRTSVSQALRVRRQVPASQSDPRAYVSAHFKILP
QEFTLGDGRSYGEFRNRPLQNGQEYVFFVLALLDLSNNTMYSTSPYSDPVTSNDVDPQPI
VDEEEGLLWVVGPVMAVIFIVCIVIAILLFKSKPDRKRAEAEGRKASFPCSKAMSSHHPT
DPVELRRINFQTPGSYRVSAFRGYRRLSSMASHPPVPISELADHLERLKANDNLKFSQEY
ESVDPGQQFTWEQSNLEVNKPKNRYANVIAYDHSRVLLSSIEGKLAVTHIHANVITYDHS
RVLLSSIEGETHTHTHFSCFILGQSKSSFAVLI
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgggtccccagctgaaggtggttgaacgctctagaacggccaccatgctgtgtgctgct
agcggcaaccccgacccagaaatcacctggtttaaagacttcctccctgtcaacaccacc
aataacaacgggcgaatcaaacagctccgttcagagtcctttggtggcacgcctataaga
ggtgccctccagatagagttgagtgaggaacaggaccaggggaaatatgaatgtgttgcc
accaacagcgacggaacccgctactccacccctgctaacctatacgtcagagtgcgcagg
gttccccccaggttctccgtccctccagcagacagtgagataacaccaggaggtggtatc
aacatcacctgcgtggctgtgggctcccccatgccttacgtcaagtggatgttaggcaca
gaggacctcaccccggaggacgacatgcctatcggacggaacgtcctggagctgggagac
atacgtcagtctaacaactacacctgtgtggccatgtccactctgggggtgatagaggcc
atggcacagatcacggtgaaagccctgcccaagaccccaggtaacccagtggtaacagaa
cgaactgccaccagcatcactctgacctgggactcaggtaaccctgaacctgtgtcctac
tacatcatacagcaccgtcctaaaggttcagaagacatctataaggagatagacagtata
acgactacacgctacagtgtaggtggtctcagcccgtactctcactatgacttccgggtg
gcggcggtcaacaccattggtagaggtccagccagcgactctgtagaggccagaacagca
gaacaggctccgtcgtcaccaccacgacaggtcagaggtcgtatgctgagtaccaccaca
gctataatccactgggatggacctgaggaggctaacgggcaggtggtgggatacagagtc
tactatacagacgacaacacactgcaagtcaaccagtgggagaagctgatggttcgtggt
gtgaacttcatcaccatccacagtctgacccctaataagacctattacatcagagtcctg
gcctttacctctgtaggagacggacctctctcccaggacctgcagatcatagccaagact
ggagttccgtcccagccatcagacttcaaaggagaggccaagtcagagaccagtgtatta
ctgtcatgggtagctcctccacagagtgggcctgaaaacctgatcactggatatgaactg
gtatacaggaggtctggtgacaacgaagagaagaagctgaattttgaccccgcctcctcc
taccttataaagaatttgaagccattctcctcctacaccttccagctggcagcacgtagc
aagcacggcatcggagcgtataccaacgaggttaccacagatacaccacagacacaaccc
tcggcccctccgcaggaagtcacatgctccagccccaactccaccagcatcctggtaagt
tgggctccgcccctggcggaattccagaacggaatcataacgggatattccatccagtat
tctgtcacggaacgggacaacaggacttcccagcaagtcagccgaattccaccgggaagc
tctccgtaccttctggaaaacctggagaaatggaccgagtatggaatcacggtcagagcc
ctgacggaagccggagaaggaccagagagtctacaactactagtacgcaccgaagaagat
gttcccagtggtcctccgcgcgacgtggcgtcggaggcggtgaactcgtcagcagtcagg
gtggtgtggcgggcaccggccgtggagcggcaacatggtcaggtcagaggttaccaggtc
cactacatgaagatgaactatggagaacccgctggacccaacctcatcaaggatatactc
ctagacgactcacagtgggaatacaatgaatctgcagaatatgagttggttctaggggaa
ctccaggctgatactgcctactctgtgtctgtgggggcatacaccgccaagggagacggg
gcacggagcaaaccccaaactctctgcactaccctcccactcccagaaccccccaggctc
tcagtaagtcccacccccgtgggcacggcccagctccagtggctgcctccacccagcccc
gctacccctctcctggggtaccgtctaaccttcggacgcctggatgtcctccccttcacc
gtggtagaattccccagcaaggaaaagtcctacactgctcaggatatccacaagggggcg
tcgtacgtgttccgactctccgcccggaataagataggatatggagaggaggcagcgatc
gaggtgaccactccggaagacgttcccggaggacacccagaaaatatcctgtctgaaggc
gcctcggcgtcttccatacggctcgcttggaagtctgtcccgctgatcgaacaaaacggg
aagattgtgaagtactcggtgcagtaccgggatgttaacggtagaggtgggaacgctacc
ggggaggtggtggtgacggtaccggaatctagcgtggcgttggaagggctgagcgctgac
acggtgtatgacgtcagagtgcgtgcgttcacagcggtaggggcggggccgtatagtccc
ggtgtccagtttaggacgcgaccactggatgtggaagtgtttgctactaacttcagagtg
aaggctgccatgaagaactcagtcctgctgacctgggagatacgagacaaaacaccctcc
cagccttttacgatcctgtatggtaagggtcagagtgttgaggtggatggtaaacagaac
cagaagctgataacaggtctgcagccggaaacacagtactccttcctgttgactaaccgt
ggcaacagtgccggaggtctacagcaccgcgtaaccgtgacgaccgccccggacgtgctg
cgttccaaacccacgctggtggggaagaccaacgcagacgggatggtgacggttcaacta
ccgcccgtacagaccaccactaccgtcaggggctactatgtggtggtggttcctctgaag
aaacagagaggagggaagttcttgaagcctggtgacaaccctgatcagatgaacctagat
gagctcctgaaagagatcaacaggaccagtgtgagccaggcgctgcgtgtccgtcgtcag
gtcccggccagccaatcagatcccagggcctatgtttccgcccactttaagatcctcccc
caggagttcaccctcggtgatgggaggagctatggagagttccggaaccgccccctgcaa
aacggacaggaatatgtgttcttcgtgctggcgctgctagacctgtctaataatacaatg
tattcaaccagcccctattctgaccccgtgacctccaatgacgtggaccctcagccaatc
gtagatgaggaggaggggcttctgtgggtggtggggccggtaatggctgtcatcttcatt
gtctgcatcgtcatcgccatcctactcttcaagagtaaaccagacaggaaaagagctgag
gcagagggaaggaaggctagtttcccctgcagcaaggccatgtcctctcaccatcctaca
gatcctgtggagctacgcagaatcaacttccagaccccaggaagttaccgtgtatcagct
ttccgcggctacagacgattgtcaagcatggctagtcacccacctgtccccatctctgag
ctcgctgatcatctagaacgcctgaaagccaacgacaacctgaagttctctcaggagtat
gagtccgttgaccccggacagcagttcacctgggagcagtctaacctggaggtcaacaag
ccaaagaaccgctatgctaacgtcattgcctacgaccactccagggttctactgtccagc
atcgagggtaagttggcagtcacacacatacacgctaacgtcatcacctacgaccactcc
agggttctactgtccagcatcgagggagagacacacacacacacacacttttcttgtttt
attctcggccagtctaaaagttccttcgctgtcttaatatga
DBGET
integrated database retrieval system
