Oncorhynchus mykiss (rainbow trout): 110516509
Help
Entry
110516509 CDS
T07259
Name
(RefSeq) lethal(2) giant larvae protein homolog 1-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110516509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110516509
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110516509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Lgl_C
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
110516509
NCBI-ProteinID:
XP_036828195
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MMKFRFRRQGNDPQREKIKQELFAFNKTVEHGFPHQPCALAFDPQLQLMAIGTKSGAIKI
YGSPGVEFTGLHRDAAAVAQIHFLQGQGRLLSLLDDNTLHLWELGGASRDRGGAKSEGVV
YLEEKRNYSLLGRPGLESCSASRVTVLLLLSSCDLLCVGTEGGGIHFLDLPRLSLRDNQS
LLLDQVMQSIPEDYRCGKSLGPVESLQEHPKQPGKILIGYSRGLVVLWDLSTRNAEHMFL
GKQQLESLVWERSGSSFVSSHSDGGYSVWAVASGNTYTHQPVSSSIPYGPFPCKAINKIL
WRTIQSGCPVVLYSGGMPRASYGDRHCVTIQQDKQHVTLDFTSRVIDFFTVHTTDPEHDY
DDPKALVVLLEEELVVIDLLTTGWPSVPPPYLAPLHSSAITTSCHLDNVPAKLWDRLAAA
GNNQGAQPGVRHAHGSWPICGGKNLAPPPRQQELLLTGHEDGTVRFWNVSAVAMTPLYKL
STANVFHTDCDPNDDPLDPTNDPEALQEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYS
CRLVVAGTAGQVIVLGLSDEWSDHTVDVSTVDLLQDREGFTWKGHDRLEPRASPAPFPPG
FQPLVLVQALPPASVTSVMLHAEWNLVAFGTSHGFGLFDYHRRTAVLARCTLHPNDSLAM
EGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRPIPTPTSKIQEANAALADQEEVAPVQRRI
EPRSADDSLSGVVRCLCFADTYLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGTGRGRPG
GEGSGCVEAVLGKEIQLMHRAPVVSVCVLDGRGKPLPEPYQASLDLATAPDMTNPHSVLI
ASEEQLKVFSLPKVGAKTKFKLTAHEGCRVRRVAMVTVCSTAQEDYSETSLVCLTNLGDL
HLFNVPALRPQVRYDCIRKEDISGIASCVFTRNGQGFYLISPSEYQRFSLSAKVITEPLC
TVELERPLETHISDDAAMPLRANGTHRNQAEGLNEDPQCGLPSPPPLSPLDSPLSMADIS
LDTTGELTVEDVRDFLTSVDEVENNLRNITEEDGCSLGVLIT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggttccgtcggcagggcaacgacccacagagagagaaaattaaacag
gaattgttcgccttcaacaagaccgtggaacatgggttcccccaccagccctgtgcgttg
gcctttgacccccagctgcagctcatggccatcgggaccaagtctggagccatcaagatt
tatggatctccaggggtggagtttacaggactacacagagacgctgcagccgtagcgcag
atacacttcctccaaggacagggccgtctgttgtcgctgcttgatgacaacacgctgcac
ctgtgggagctgggcggagcttcccgggacaggggaggggctaagagcgagggtgtggtc
tacctggaagaaaaacgcaactacagtctcctgggacgacctggactagagagctgcagt
gcaagccgtgtgacagttctgctgttgttgagttcatgtgacctgctgtgtgtcggcacc
gagggagggggcatacacttcctggatctgccacgcctctcgttgagggataaccaatca
ctcctgctggatcaggtgatgcagagcatacctgaggactacaggtgtgggaagtctctg
ggaccggtggagtcgttacaggaacaccccaagcagccagggaagattctgattggctac
agcagaggcctggtcgtcctatgggatctcagcacccgcaacgcagaacacatgttcctg
ggaaaacagcagctggagtccctggtgtgggaacgttccggtagctccttcgtcagttcc
catagcgacggggggtacagcgtgtgggctgttgccagtggtaacacgtacacacaccag
cctgtgtcctcgtccatcccctatggtccattcccttgtaaagccatcaacaagatctta
tggaggacgattcagtcagggtgtccagtagtcctctacagtggaggaatgcccagggcc
agttatggagaccgtcactgtgtgaccatccaacaggacaaacaacacgtcactctagac
ttcacatccagagttatagacttcttcaccgtccacaccactgacccggagcacgactat
gatgatcctaaagccctcgtggtgttactagaggaggagctggttgtaatagacctcttg
accaccgggtggccctctgtccctcctccttacctggctccgctccactcctccgccatc
accacatcctgtcacctggacaacgtccccgccaagctctgggaccgcctggccgccgcc
gggaacaaccagggcgctcagcctggagtgagacacgcacacgggagttggccgatatgt
ggaggaaagaatctagcgcccccgcccagacaacaggagttgctgctgacggggcatgag
gacggtacagtgcggttctggaatgtgtctgctgttgccatgactcctctctacaagctc
agcacggctaacgtcttccataccgactgtgaccctaacgacgaccccctggaccctacc
aatgaccccgaagcactgcaagaggaggagtggcctcccttcaggaaggtgggctgtttt
gatccgtatagtgatgatcctcgtctggggatccagaagatcagtctgtgtaaatacagc
tgtagactggtggtggccgggaccgctggacaggtgatcgtactgggtctgagtgatgaa
tggtcggaccacacggtcgatgtctccacggtcgacctgcttcaggaccgagaggggttc
acctggaagggccatgataggctggagccccgagccagccccgcccccttccctccaggc
ttccaaccattggtcctcgtgcaggccctgcccccagcctctgttacctctgtgatgctg
catgcggagtggaacctcgtagcgttcgggacgagtcacggcttcggactgtttgactac
cacagacgcactgctgttctggccaggtgtaccctgcaccctaacgactccctagcgatg
gagggtcctctcagcagagtgaagagtctgaagaagtctctcagacagagcttcagacgc
atcaggaagagtagagtgtctgggaagaaacgccccatccccacccctaccagcaagatc
caggaggccaacgcagcgctagctgaccaggaggaagtagctccggtgcagaggaggatc
gagccgagatcagctgacgactctctatcaggagtggtgcgatgcctctgtttcgctgat
acgtacctcagagacggtacacaccacggcccgacgctgtgggcggggacaaactcaggg
agtgtgtatgcttacgcgttggaggtcccgggtgtggggacgggccgtgggcggccgggg
ggtgaggggagcggctgtgtggaggccgtgttggggaaagagatccagctgatgcacagg
gctccggtcgtgtccgtctgcgtgctggacggacgggggaaaccgttaccagaaccttac
caagcctctctggacctggctactgctccagacatgactaacccacactctgtcctcatc
gcttcagaggaacaactcaaggtgttcagtcttcctaaggtcggtgcgaagaccaagttc
aagctgacggctcatgagggttgtcgtgtgcggagggttgccatggtgactgtgtgttcc
acggcccaggaggactacagtgagaccagtctggtctgtctgaccaaccttggagacctg
cacttgtttaacgtacctgccctacggccacaggtacgttatgactgtatccgtaaagag
gacatcagtggcatcgcttcctgcgtcttcacaaggaacgggcaggggttctacctgatc
tctccatcagagtaccagcgtttctccctgtcagctaaagtcatcacagaacctctatgt
actgtggagctggagagacctctggagacacacatcagcgacgacgcagccatgcctctc
cgggccaacggaactcaccggaaccaggctgaagggttaaacgaggacccccagtgtggc
ctcccctccccgcctcccctctcccctctggactcccccctcagcatggctgacatcagc
ctggacaccaccggagaactcactgtagaggacgtcagggacttcctcacttccgtggac
gaggtagagaataacttgaggaacatcacagaggaggacggatgctctctaggagtcctg
atcacctga
DBGET
integrated database retrieval system
