Oncorhynchus mykiss (rainbow trout): 110516594
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Entry
110516594 CDS
T07259
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22
KO
K06467
CD22 antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110516594 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110516594 (si:dkey-24p1.1)
04090 CD molecules [BR:
omy04090
]
110516594 (si:dkey-24p1.1)
04091 Lectins [BR:
omy04091
]
110516594 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
SIGLEC family
110516594 (si:dkey-24p1.1)
CD molecules [BR:
omy04090
]
Proteins
110516594 (si:dkey-24p1.1)
Lectins [BR:
omy04091
]
I-type lectins (Siglecs)
110516594 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
Ig_CD22
I-set
ig
V-set
Ig_VEGFR-1-like_5th
Ig_4
C1-set
Ig_5
Ig_7
VEGFR1-3_N_Ig-like
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
110516594
NCBI-ProteinID:
XP_036829587
LinkDB
All DBs
Position
3:27016458..27048676
Genome browser
AA seq
1064 aa
AA seq
DB search
MILKRTVAMFHFLTVLLMVINVPVCNLETPIKITGEHLAAKEGSCITIKCTVTSLMKHEQ
DQWFWMKNARWNDNMKDFTGTIVISNTKAQTPAPEFADRVKYIGSVNFGKVTQSDCSLLI
NNLEKTDSGIYTFRYIGKNDKWMTEAGLNLTVEDDPCQVRVQKLNHSTVIESAPVTFRCF
TSAACGSHPEFTGLGQTVMPVHTYEGNRVSSAVSFNASWQDDGRVLSCQPQGTKDQCVSK
SIKLTVEYAPKKTTAVVDLSTVKKGQPVTLTCSSRGHPNATYSWFKDSQKTQFSGTELLI
RSTTSTHSGNYYCEAVNQHGSHNSNVVTINVKYAPVGVHIETNKDRSTIKEGDQIKLTCV
VQKSNPEAHSWSWFKDNNKITNALKEYTISSVQLDDGGRYSCEARNDVGGGRSYSGYQIT
VSYVPRNTHITQSGGSHDNQVKAGSQLCLTCAAEAHPAPSVYTWYHHSGVLPHRLSSITG
PKQTLLLVRVGITDEGCYICRATNDIGTGQNSSMSCFRVLYGPTKPVLSMVRTAQEGHLV
SINCTVQSFPDSQLTLTWTPRPSVSPMSSSLLQMQPQPVLGFLQHSTNVVRGSFNVTFLQ
GGVYTCRAQNSEGKSSTEEELEITYSPKNVMASAHPDTVLTENSQLVLSCTARSNPHVTK
YTWIQISAGETRVVGLVQKLTVMSTTPSHSGLYRCTAQNSLGTGESQQVEVKVKYAPKLT
KVIHNMTNRWQSDGGSPVALTCHSHSYPPVDSYKWYRLVEEREHFIINHQNITVHPDKPG
TYYCVATNDMGGKESGRVELFLNRSVFHVLSLVLPFCCVPLVLLLIFLVYRHKRIKSIHQ
GTSHKLPCCVHFGFLGWRNGTSENLVSEGGAAASDPPGSSRDQLYHPEPLPQPPHPHPSR
TSGPDSTSTSDIYTAYSVLKVPGGKQGLSPSHPIRNKDEHTGHTQEPEVNYASLQFRGQE
MGSLGPRDQAREDDVYAKVGKPKLKEKTNKCNDYENIKEVCASKPTIEPNMDTETGSSED
DVEISYSEVMFRAKPGHQTVCSSDPRHHRAGHSSSSDEEDYITQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaagagaacagttgcaatgttccatttcttgacagttcttctgatggtgata
aatgttcctgtttgcaatcttgaaacacccatcaaaataactggagagcacttggccgca
aaggaaggttcctgcattacaatcaaatgcactgttaccagcttgatgaaacatgaacaa
gatcaatggttttggatgaaaaatgcaaggtggaatgacaacatgaaggacttcactggc
acaattgtaatcagtaacacgaaggcccaaacccctgcccctgaatttgcagacagagta
aagtacattggttctgtgaattttggaaaggtcacacaaagcgactgcagcctactcatc
aacaacctggaaaagactgacagtggaatctacacattcagatatataggaaagaatgac
aaatggatgactgaagcaggtctgaatcttacagttgaagatgacccgtgccaggttaga
gttcagaagttgaaccattcaacagttatagagtctgcgcctgtgacctttcgatgcttc
acgtcagcggcatgtggatcacacccagagttcacagggcttggtcagaccgtaatgcct
gttcacacctacgagggtaaccgtgtaagcagtgcggtcagctttaatgctagctggcag
gatgatgggagggtgctctcctgtcaaccacaggggaccaaagaccagtgtgtgagcaag
agcatcaagctgacggttgaatatgcccctaagaagacaacggcagttgtagatttgtca
actgtaaagaaaggacagcctgtcactctcacgtgttccagcagagggcacccaaatgct
acttactcctggtttaaagacagtcaaaagacccaattcagtggaacagaattgttgatc
cgatctaccacatctacacacagcgggaattactactgcgaagctgtaaaccaacatggg
agccacaactcaaacgttgttacaatcaatgttaaatatgctcctgtcggagtgcacatt
gaaacaaataaggatcgatctacaatcaaagaaggagaccaaatcaaattaacttgcgtg
gtgcagaaaagcaaccctgaagcacattcatggtcttggttcaaagacaacaacaaaata
accaatgctttaaaggagtataccatcagcagtgtacagctagatgatggaggacgttac
tcctgtgaggcgaggaatgatgttggcgggggaaggtcatattcaggatatcagataacg
gtttcctatgttccaagaaacactcacatcacccaaagcggaggttcccacgacaaccag
gtgaaggcaggctctcagctatgtctcacctgtgcggctgaggcccatcctgcccccagt
gtctacacctggtaccaccatagtggagtattaccacatagactaagctccatcacaggc
cccaaacagaccctactcttggttagggtgggcataacagacgaggggtgttacatttgt
agggccaccaatgacatcggcacgggacagaacagcagcatgtcatgcttccgtgttcta
tatggcccaaccaaaccagtgctttctatggtgcgcacggcccaggagggccacctggtt
agtatcaactgcaccgtgcagagtttcccagactctcagctcactctgacatggactccc
cgtccctctgtctcaccaatgtctagctcccttcttcaaatgcagcctcaaccagttctt
gggttcctccaacattctaccaatgttgtccggggttcttttaatgttacattcctgcaa
ggaggggtttacacctgtcgagcccagaactctgaggggaagagcagcacagaggaggag
ctggagattacatacagccccaaaaatgtgatggcctctgctcaccctgacacggtcctg
actgaaaacagccagctggttctttcctgcacggctcgttccaacccccatgtcaccaaa
tacacctggatccagatcagcgcaggagagaccagggtagtggggctggtccagaagttg
acggtgatgtccacaaccccatcccatagtggactgtacaggtgcactgcccagaactcc
ttaggaactggggaatcgcaacaggttgaagttaaagtcaagtatgctccaaagctcaca
aaggtcattcacaacatgaccaataggtggcagagtgatggggggagccctgtggcactg
acctgccacagtcacagttacccccctgtcgacagctacaagtggtacaggctggtcgag
gaaagggagcatttcatcatcaatcaccagaacatcactgtccacccggacaagcccggg
acatactactgtgtcgccaccaatgacatgggggggaaagaatctggaagagttgagctg
tttctcaaccgaagtgtcttccatgtcctctctctggtccttcctttctgctgtgttccg
cttgttcttttactcatctttctggtctacagacacaagagaatcaaatcgatccatcag
gggacatcacataaactgccttgttgtgttcactttggttttctgggctggcgtaatggc
acaagtgagaacctggtgagcgaagggggtgcagcagcatcagaccccccggggagcagc
agagatcagctgtaccacccagagcccctgccccaaccgccgcatccccatcccagcagg
acgtcgggtccagacagcacgtccacctctgacatatacactgcatacagtgttctgaag
gtaccaggtggaaagcagggtctttcaccaagccatccaatcagaaacaaagatgaacac
actggacacacgcaggaacctgaagtcaactatgcgtcgctgcaattcaggggccaggag
atgggtagcttgggtcctagagaccaagcgagagaggatgacgtctatgctaaggttggc
aagccaaagctgaaggaaaagactaataagtgcaatgactacgagaacattaaggaagtg
tgtgcttcgaagcccaccatcgagccaaacatggacacggagacggggagcagtgaggat
gacgtggagatcagctactctgaggtcatgttcagagcaaagccaggacaccagacagtc
tgtagttctgaccctcgccaccatagggcaggccacagcagcagctcagatgaagaagac
tacataacccagtag
DBGET
integrated database retrieval system
