Oncorhynchus mykiss (rainbow trout): 110516650
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Entry
110516650 CDS
T07259
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110516650
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
110516650
TFIIIC, fungi type
110516650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_14
TPR_1
TPR_19
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_10
TPR_9
ANAPC3
TPR_EMC2
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
110516650
NCBI-ProteinID:
XP_036838016
LinkDB
All DBs
Position
7:complement(4858173..4878929)
Genome browser
AA seq
972 aa
AA seq
DB search
MSGFSSELIDYLEGRISFEEFEIRREERKAKLKVSNEGRSEEDEEIGPDDTLPSTSHGRS
PRKCSQKRPAADPEEGVSPSVQKAFASMMEEGTETEQTEEEEEEEDDDEDNDDDYEEEEE
EDSEEERKVEAKGDEEGPSAGDVFALEMELNRENKKMMKERRNRSKLPRALRGLMGEANI
RYARGDKEDAVLMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDCE
EWVKLADMSLERDNIRQAIICYTKAIKYDPSNVRYLWERCSLYEQVGEHKQSMDGYRRIL
NLLPPTDGEHFMQLSRDMAKSYYESSDLPSAMGVMEEALRRHTELVTDESINMAAELYIA
NHQHDKALQVLVQFCGIVLERGEPKPDLVEEEQEKMESEEQEKMESEENPEEQEKMEAEE
NPEEKMEAEEEEEQKKMEAEEENPEKEKEMKTATTEEPGETGGEVREVVVPDHVPVDIRV
KLMVCLIHQHVYRPLDSMLTSLMEQSPEELGDLYLDVAEAFLDQGEYNSALPLLSALVCS
ERYNLAVVWLRHAECLKALGHMEVAVKSYNKVVQMAPLHLEARLCLSTLQQQLGRPLCAL
KALEPMYDPDTLAQDASAAQQELKLLLHRSTLLRSQGRLDDYLDTMLTMLAMLLKVAMTR
AQVCVKASMWAGVRHLRLVKVSKDLVSDIHDQEAAYQDISGKTSVLSREDWWLLLVRCVC
TLCEMKRFKEAELLVDSSLEFYSFYDVKVKRKELEFFGLSAAFLDHNYRKAYDYIRLTLM
EKQEWPMLWNVFNQVTLHSQDVRHHRFCLRLMMKNPDNHALCVLSGHNALVSGSFKHALG
QYVQAFRSKPDEPLYSLCVGLTFFHMASQKFVVKRHPLILQGFSFLWRYVEQRGPCQESM
YNLGRALQQMGLAHLAIHYYHKALSFPPLTLEGIADDQVDLRREIAFNLSIIYQASGNTE
MVRHLINTYCTV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttcagttcagagctcattgactacctggagggaagaatttcattcgaggag
tttgaaatacggagagaggaaagaaaagctaaattgaaggtatcgaacgaagggcgttca
gaggaagatgaagagattgggccagatgacactctccccagcacttcccacggccgcagt
ccgagaaaatgttctcaaaaacggcccgcagcggatcccgaggaaggcgtcagcccctct
gtccagaaggcctttgcctcgatgatggaggagggaacagagactgaacagactgaggaa
gaggaagaggaggaggatgatgatgaagacaacgatgacgattatgaagaagaggaagag
gaggattcagaggaggagaggaaggttgaagctaagggagatgaggaagggccctcagct
ggggatgtctttgctctggaaatggagcttaaccgagagaacaagaagatgatgaaggag
agacgtaaccgcagcaagctgccccgggccctaaggggcctcatgggagaagccaacatc
cgttacgcccgcggagacaaggaggacgccgtcctgatgtgtatggagatcatcagacag
gccccgctggcctacgagcccttctccaccctggctatgatctatgaagaccagggggac
atggagaagtctctacagtttggtctgatcgctgctcatctcaaccccagcgactgtgag
gagtgggtcaagctggccgacatgtctctggagcgggacaacatcaggcaggccatcatc
tgctacaccaaagccattaagtatgaccccagtaatgtgcgctacctatgggaacgttgc
agcctgtatgagcaggtgggggaacacaagcagtccatggacgggtaccgtcgtatcctc
aacctactgccccctactgacggggagcacttcatgcagctgtcacgagacatggccaaa
agctactatgagagtagtgacctgccgtcagccatgggggtgatggaggaggccctgagg
agacacacagagctggtgacagacgagagcatcaacatggctgctgagctctacatcgcc
aaccaccaacacgacaaggcccttcaggttctagtccagttctgcgggatcgtcctggag
agaggagaacctaagccagaccttgtagaggaggagcaggagaagatggaatcagaggag
caggagaagatggaatcagaggagaacccagaggagcaggagaagatggaagcagaggag
aacccagaagagaagatggaagcagaggaggaagaggagcagaagaagatggaagcagag
gaggagaacccagagaaagaaaaggagatgaaaacagcgacaacagaggagcctggtgag
actggaggggaggttagagaggtggtagttccagaccatgtaccagtggacatcagagtg
aaactcatggtctgtctgatccaccagcatgtttacagacctctggattccatgttgacg
tctctgatggagcagagcccagaggagctgggggatctgtacctggacgtggctgaggcc
ttcctggaccagggagagtacaactcagccctgcctctcctctctgccctggtctgctct
gagagatacaacctggctgttgtctggctccgacacgctgagtgtctgaaggcgctgggc
cacatggaggtagcagtgaagagttacaacaaggtagtacagatggctcctcttcacctg
gaggccaggctgtgtctgtctactctgcagcagcagctgggtcgacccctctgtgccctc
aaggccctggagcccatgtacgacccagacacactggcacaggacgcctccgcagcacag
caggagttgaagctgctgctccaccgctctactctcctgcgttcccaaggccgactggat
gactacctggataccatgctgaccatgctggctatgctgctgaaggtggctatgacgcgg
gcccaggtgtgtgtcaaagccagcatgtgggcgggggtcagacacctgcgtctggtcaag
gtgtctaaggacctggtgtcagacatccacgaccaggaggcagcctaccaggacatcagt
ggtaagaccagtgtgttgtctcgtgaggactggtggttgctgttggtgaggtgtgtgtgt
acgctgtgtgagatgaagcgttttaaagaggcagagctgctggtagactcttctctggag
ttctactccttctatgacgtcaaggtgaagaggaaagagctggagttctttggtctgtcg
gctgctttcctggaccataactaccgcaaggcctacgattacatcagactgacgctgatg
gagaagcaggagtggcccatgctgtggaatgtattcaaccaggtgacccttcactcccag
gacgtgcgtcatcatcggttctgtctgcgtctgatgatgaagaacccagacaaccacgcc
ctgtgtgttctcagtggacacaacgcactggtgtctggcagcttcaaacacgcactcggt
cagtatgttcaggcgttcaggtctaagccagatgaacctctgtacagtctgtgtgttggc
ctcaccttcttccacatggcgtctcagaagtttgtggttaaacgccacccgctaatactg
caggggttctcattcctgtggcgttacgtggagcagcgtgggccctgccaggagagcatg
tacaacctgggacgggccctgcagcagatgggcctggcacacctcgccattcactattac
cacaaggcgctcagcttccctcctcttacactagagggtattgcggatgaccaggtagac
ctgcgtagagagatagccttcaacctgtcaatcatctaccaggccagtggaaacactgag
atggtacgacacctcatcaacacatactgcactgtataa
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