Oncorhynchus mykiss (rainbow trout): 110516717
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Entry
110516717 CDS
T07259
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110516717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110516717
Membrane trafficking [BR:
omy04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
110516717
Endosome - Golgi transport
Arf GTPase associated proteins
110516717
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
110516717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_6
SOS1_NGEF_PH
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
110516717
NCBI-ProteinID:
XP_036817137
UniProt:
A0A8K9XGR5
LinkDB
All DBs
Position
24:39238180..39350381
Genome browser
AA seq
1755 aa
AA seq
DB search
MSEAEGCVSVWEWLCALHLDQYFPVFQDAGLGTLLECQGLTQDQLETIGIKLPGHRKRIL
ASLQKTHHHTHPEREHDALLTHLAAEGDQREEERAVFRPSPLGRETPLPAQRPVSRGERP
VPKERSVFREEERDGERPRPVPKERTKYRSVPVETLDCGQTSPPPNPTFCPTTPNPNSTS
YSTAPHSTAQDPPLPPIPPRSTPNGPPLRFIPTSPKHSPMAPKPRHKHNNTHSSTNTQTT
VPLPSLSTNPPTVPLPNLSTNPPTVPLPSLSTNPPTVPLPSLSTNPPTVPLPSLATNPLT
VPLPSLSTNPRTVPLPSLSTNPPTVPLPSLSTNPRTVPLPSLSTNPPTVPLPSLSTNPPT
VPLPSLSPSPVSPARHPQQVGEGGRKPSPVSLARHPQQVGEGGRKPSPVSPARHPQQVGE
GGRKPSPVSPSSSSSSFSVEQYDQSSSSDQCVPTLPPKVYVVGAGPKEPRGPAPIPRRPP
VLPPRTTPTHSDAPVNEPHPERTPPPPPRTRVHNTPIEGTQPALPMRRVPQPPPEIRSDF
GDSSDDSEDPDQVYPKPQSVNMADRDVFLPVPGWGKGRYSSLCSDDELLDDDNEPISNRQ
SSWQDYGLSTLQESVYLPVTGRILAQPPRDGPSPVLKMGWLDKNPPQGSLYYQRRWVKLD
VDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTTNRTFLFRAESDFERNEWVSV
LQNFTRGRQEGSREITSHSSMTPGSPLTPEQQGYLELRGLRSKLYTVVSGDKVFLYKNME
DYRLGIGITSIDMNVGNVKDTDRRSFDLTTPYRIFSFLADSEQHKDQWVEAMREAIGEAL
SNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKM
DRRVWTEELIQVFLLLGNERLNRFWAANVPPSEALSPTSCSEDRRRFVSSKYRQGKYRKY
HPLYGNQEELNNALCINVQCSDVLETLCLVFCGADVNCSTGQADCPSPLSLALAHNQKLQ
AQFLSHNLNTELPRSEVTGAMEPQHYSPQHPVTHNGFLFKTASMARPITERKAREEFSRR
WCMLNDGNFSYYESDKNSTPNGTLKSTEIVCMAVNTPERHGYDHTFELYSDSERIYLFGT
DDPDSHREWVKSITKTFIPSNAEGLLRLAFERIGRLRYKDGLNLQSPRVGWFALVGSSLH
AYLEDSVEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEGEKKLDFQGWCVSVQRAAG
SAGDSLSQQQLTETDIPVIVDRCIDYITQCGLTSEGIYRKSGVNSRVATLCEAFRRDARS
VRLKEGEHQVDDVSNTLKRFFRESGEGLFTIQAASAWLSTPVIPEESRKICQYQLLLSQL
PRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQSDGKDYTAGLVVEELIEH
YTDVFEVDEMQLKRQLDEITAIIKVREKLNHNSSVPASGSAGDFICTVYLEEKKETTEQH
VKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQKEEMERPLHHLERVLPIIHSLGT
DSHLLVKKHLAMEAIRIYLASKVDVSKHGMVKFREEKSILGLGLNTGSFHDRYFILSTVS
LRMYKEVRSNRPEREWQVKNLRVYLGIKKKLRPPTCWGLTVINGSEKQEKPERQQWYLCC
DTQTEMREWFSTFLTIQYDGNVWPADAVQTRVTRALPADTRHGNVALIPLRGSENEMRNS
VAAFTADPLGLFRDV
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggaggggtgtgtgtcggtgtgggagtggctgtgtgctctgcatctggac
cagtatttcccagtgttccaggatgcggggttaggaacgttgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcaaactgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacacaccaccacacacaccccgagagagagcacgatgccctactc
acacatctggctgcagagggagaccagagagaggaagagagagctgtgttcagacccagt
cctttggggagagagacaccactacctgcacagagaccagtatccagaggagagagacca
gtccctaaggagagatcagtgttcagggaagaagagagggatggagagagaccgagacca
gtccctaaggagagaactaagtaccgctctgtccctgtagagacattggactgtggccag
acttccccccctcccaaccctaccttctgccctaccacccccaatcccaactctacctcc
tactctaccgccccccattctactgcccaggacccccccttaccccccatcccccctcgc
agcaccccaaacggccccccactacgcttcatccccacctcccctaaacactcccccatg
gcacccaaacccagacataaacataacaatacacactcctctacaaacactcagaccaca
gtacccctccctagcctctccaccaatccccccacagtacctctccctaacctctccacc
aatccccccacagtacccctccctagcctctccaccaatccccccacagtacccctccct
agcctctccaccaatccccccacagtacctctccctagcctcgccaccaatcccctcact
gtacccctccctagcctctccaccaatccccgcacagtacctctccctagcctctccacc
aatccccccacagtacctctccctagcctctccaccaatccccgcacagtacctctccct
agcctctccaccaatccccccacagtacctctccctagcctctccaccaatccccccaca
gtacctctccctagcctctctccctcgcctgtttcaccagccagacacccccagcaggtg
ggggagggagggagaaagccctctcctgtttcactagccagacacccccagcaggtgggg
gagggagggagaaagccctctcctgtttcaccagccagacacccccagcaggtgggggag
ggagggagaaagccctcccctgtttcgccctcttcctcctcctcttccttctcagttgaa
caatatgaccagtcttcctcttctgatcaatgcgtgcccaccctcccccctaaagtctac
gtggtgggggcgggccctaaagagcctcgcggccctgctccaatcccacgtcgacctcct
gttttgccccccagaaccacacccacacatagcgatgctccagtcaatgagccgcacccc
gagcgaactccaccccccccgcctcggaccagggtacacaacacaccaatcgaaggcaca
cagcctgctctgccaatgagaagagtcccccagccaccgcctgaaatcaggtcagatttt
ggtgacagttcagatgactctgaggatccagaccaagtttaccccaagccccagtctgtg
aacatggcagacagggatgtgttcctgccggtgccggggtgggggaaggggcggtacagc
tctctctgcagcgacgatgaactattggacgatgacaacgagccaatcagcaaccgtcag
agctcatggcaggactatggtctgagtacgctacaggagagtgtctacctgccggtcaca
ggcaggatcctagcccagccccctagagatggcccctcccctgttctaaagatgggctgg
ctggataagaacccaccgcaggggtctctgtactaccagaggagatgggtgaagctggat
gttgactacctgagatactttgacaacgacaaggaggtatactctaagaggatcatacca
acggctgccattacgggggtgaccaatgtgggggagcagaagtttgaggtggtcacaacc
aaccggacctttctcttcagagccgagagcgactttgagaggaatgagtgggtgtcagtt
ctgcagaacttcactagggggcgccaggagggcagcagggagattacttcacactcctcg
atgacccctggttcacccctgacccctgaacagcagggctacctggagctgaggggcctg
cgctccaaactctacacagtcgtctctggagacaaggtcttcctctacaagaacatggag
gactaccgtcttggcatcggcatcacgtctatcgacatgaacgtaggaaacgtgaaagac
actgaccgtcgcagctttgatctgacaacaccctaccgcatcttcagttttctagcggat
tcagaacaacataaagaccagtgggtagaagcgatgcgtgaagcgattggagaggctctg
tccaatagcgaggtggctaatcaaatctgggcggagcctagcaatggttgctgtgccgac
tgtggcgccgccaaacctgagtgggctgccatcaacttgtgtgtggtggtctgcaaacgc
tgtgcaggagagcaccgcggtttaggccccagcatctctaaggtgcgcagtctgaagatg
gacaggagggtgtggacagaggagcttatacaggtgttcctgttgctaggtaatgagcgt
ctgaacagattttgggcggcgaacgtccctcccagcgaggcgctgagtccgaccagctgc
agcgaagaccgccgacgattcgtcagctccaaatacagacagggcaaataccgcaaatac
caccccctctacggcaaccaggaagagcttaacaacgccctgtgtataaacgtgcagtgc
agtgatgtcctggagaccttatgtctggtgttctgtggagctgatgtgaactgttctact
ggccaggctgactgtccctcccctctctccctggcactcgcccacaaccagaaactacag
gcccagttcctctcacacaacctcaacacagagctgcctcggtcggaggtgaccggggcc
atggagcctcaacactattcaccacagcaccccgtcactcacaatggcttccttttcaag
accgcctccatggcccggcctatcacggagcgtaaggccagggaggagttcagtcgtcgc
tggtgtatgttaaatgatgggaactttagttactatgagagtgacaagaactccacgccc
aacggaaccctgaagtctacagagatagtctgtatggctgtcaacacaccagagagacat
ggctatgaccatacatttgagctgtactcagactctgagcgtatctatctctttggcact
gatgacccagacagccacagggagtgggttaaatctatcaccaagacgtttattccatcc
aatgcagagggcctattgaggctggcttttgaaaggattggccggctgcggtataaagac
gggctgaatctacagagccctcgggttggctggttcgctctggtcggctcctccctccat
gcctacctagaggacagtgtggaagaggaggagatacacctacgcaaactacaggagctc
tcgatccagcaggagaatgaggtgctggttctggtggagagaggcaggactctgtacatt
gagggggagaagaagcttgacttccagggttggtgtgtgtccgtgcagagagcagcaggc
agtgcaggagactctcttagtcagcagcaactaactgagaccgacatccctgttatagtg
gaccgctgcattgactacatcacacagtgtggtctgacgtccgagggtatctaccgtaag
agcggtgtgaacagtcgcgtggcgacgctgtgcgaggcgtttcggcgtgatgcccgtagc
gtgcgtctgaaggagggtgagcaccaggtggacgacgtgtctaacacactgaaacgcttc
ttcagagagtctggagagggcctgttcaccatacaggctgctagcgcatggctcagcaca
cctgtgatcccagaggagagcagaaagatctgtcagtaccagctgctgctgagccagctg
cccagagtcaacaaggccacgctacgagccctggtcaaccacctctactgtgtgcagcgg
tttgcagagctgaaccagatgaatctccataacctggctatagtatttggcccaacactg
ttccagagcgacgggaaggactacaccgctggccttgtcgtagaggaactcatagagcac
tacacggacgtctttgaggtggatgagatgcagctgaaaagacagctggatgagatcacg
gccatcattaaagtcagagagaagttgaaccacaactccagcgtccctgcgtcggggtca
gcaggtgacttcatctgtacagtgtacctggaggagaagaaggagacaacagagcagcat
gtcaagatccctggttctatgacggcagcagagctgacctgtgagattctggaccggcgg
aagatccaggtcagagagaaagactactggagctgctgggaggtcagccagaaggaggag
atggagcgtccattgcatcatctggagcgtgtgttacccatcatccattctctgggtacc
gactcccacttgctggtcaaaaaacatctcgccatggaggccatacgcatctacctggcc
agtaaagtggatgtgtccaagcacgggatggtgaagttccgggaggagaagagcattctg
ggattgggactgaataccggcagcttccacgaccgctacttcatcctgagcactgtctcc
ctcaggatgtacaaggaagtgcggagtaatcgtccagagagggaatggcaggtgaagaac
ctgagggtctatctaggcatcaagaagaaactacgaccacccacctgttggggtctgact
gtgatcaatggaagtgaaaaacaggagaagccagagaggcagcaatggtatctgtgttgt
gacactcagacagagatgagggagtggttctccaccttcctcactatccagtatgatggt
aacgtgtggccagcggatgcagtacaaacacgtgtgacccgtgcgttgccggcggatacg
cgtcatggtaatgtggcgttgattccattgcgcggcagcgagaatgagatgcggaacagc
gttgcagctttcaccgccgacccgcttggcctctttagagatgtctga
DBGET
integrated database retrieval system
