Oncorhynchus mykiss (rainbow trout): 110516753
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Entry
110516753 CDS
T07259
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110516753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110516753
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
110516753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
110516753
NCBI-ProteinID:
XP_036829461
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGDMSTGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDESNGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWQCSRFTDCSLYVGGQEFKAHKSILAARSPVFSAMFEHEMEESKKNR
VDISDVEPDVFKEMMGFIYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCTSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcctacccctcctccaccaggggacatgtctactggacctgtggcagag
agctggtgttacacacaggtgaaagtagtcaagttctcctacatgtggaccatcaacaac
ttcagtttctgtagagaggagatgggggaggttttaaagagttccaccttctcatctgga
cccaacgacaagatgaaatggtgtctgagagtcaacccaaaaggactggatgatgaaagc
aaagattatctgtcgctgtatttactacttgttagttgtccaaaaagtgaagtcagagca
aagttcaagttttccttattgaacgctaaaagagaagagactaaagctatggaaagccaa
agagcctatcggtttgtccaggggaaggactggggcttcaagaagttcattagaagagat
ttcctgcttgatgaaagcaacgggttgttacctgatgacaagctcaccctgttctgtgag
gtgagtgtggtgcaggactctgtgaacatctctggccagtccaacatgaacatgctgaag
gtaccagagtgccagctgtcagacgacctggggaacctgtggcagtgttcccgcttcact
gactgttccctctatgttggagggcaggagttcaaggcacacaaatccatcctagcagcg
agatctcccgtatttagcgccatgtttgaacatgagatggaagagagtaaaaagaaccgt
gtggacatcagtgatgtggagccagacgtgtttaaggagatgatgggattcatctacaca
gggaaagctcccaacctggacaagatggccgacaacctgctggcagctgctgacaaatat
gccttggagcgtttaaaggtgatgtgtgaagaggctctgtgcaccagcctctctgtggag
aacgtggctgataccctgatcctggcggacttacacagtgctgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagcgtcctccgacagctgggctgtaaagatgggaaa
aactggaatagcaatcatgccacggacataatggagacggcaggctggaagtcaatgatc
cagtcccaccctcacttagtggccgaggccttcagagccttggcatcggcacagtgcccg
cccttcggcctgccgaggaagcgcctaaaacagtcctga
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